RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 UTP14CQ5TAP6 766 aaKnown RBP18.24■□□□□ 0.51
SLX4-202ENST00000466154 KCNK18Q7Z418 384 aa18.24■□□□□ 0.51
SLX4-202ENST00000466154 CCDC155Q8N6L0 562 aa18.24■□□□□ 0.51
SLX4-202ENST00000466154 CAGE1Q8TC20 777 aa18.24■□□□□ 0.51
SLX4-202ENST00000466154 DHTKD1Q96HY7 919 aaPredicted RBP18.24■□□□□ 0.51
SLX4-202ENST00000466154 PNKPQ96T60 521 aa18.24■□□□□ 0.51
SLX4-202ENST00000466154 TMX4Q9H1E5 349 aaPredicted RBP18.24■□□□□ 0.51
SLX4-202ENST00000466154 LAMB1P07942 1786 aa18.24■□□□□ 0.51
SLX4-202ENST00000466154 TBC1D8O95759 1140 aa18.24■□□□□ 0.51
SLX4-202ENST00000466154 TTLL1O95922 423 aa18.24■□□□□ 0.51
SLX4-202ENST00000466154 CRY2Q49AN0 593 aa18.24■□□□□ 0.51
SLX4-202ENST00000466154 GDAP1L1Q96MZ0 367 aa18.24■□□□□ 0.51
SLX4-202ENST00000466154 SEMA6BQ9H3T3 888 aa18.24■□□□□ 0.51
SLX4-202ENST00000466154 POLD4Q9HCU8 107 aa18.24■□□□□ 0.51
SLX4-202ENST00000466154 MYO6Q9UM54 1294 aa18.24■□□□□ 0.51
SLX4-202ENST00000466154 ZRANB2O95218 330 aaKnown RBP eCLIP18.23■□□□□ 0.51
SLX4-202ENST00000466154 OAS2P29728 719 aaKnown RBP18.23■□□□□ 0.51
SLX4-202ENST00000466154 DNA2P51530 1060 aa18.23■□□□□ 0.51
SLX4-202ENST00000466154 WDR59Q6PJI9 974 aa18.23■□□□□ 0.51
SLX4-202ENST00000466154 JAKMIP2Q96AA8 810 aa18.23■□□□□ 0.51
SLX4-202ENST00000466154 JMJD4Q9H9V9 463 aa18.23■□□□□ 0.51
SLX4-202ENST00000466154 DDX25Q9UHL0 483 aaKnown RBP18.23■□□□□ 0.51
SLX4-202ENST00000466154 RGL2O15211 777 aa18.23■□□□□ 0.51
SLX4-202ENST00000466154 LONRF2Q1L5Z9 754 aa18.23■□□□□ 0.51
SLX4-202ENST00000466154 C2CD5Q86YS7 1000 aa18.23■□□□□ 0.51
SLX4-202ENST00000466154 NOA1Q8NC60 698 aaKnown RBP18.23■□□□□ 0.51
SLX4-202ENST00000466154 SMCR8Q8TEV9 937 aaPredicted RBP18.23■□□□□ 0.51
SLX4-202ENST00000466154 DDX12PQ92771 950 aa18.23■□□□□ 0.51
SLX4-202ENST00000466154 TRIM34Q9BYJ4 488 aa18.23■□□□□ 0.51
SLX4-202ENST00000466154 NHEJ1Q9H9Q4 299 aaPredicted RBP18.23■□□□□ 0.51
SLX4-202ENST00000466154 JADE2Q9NQC1 790 aa18.23■□□□□ 0.51
SLX4-202ENST00000466154 ZMYND10O75800 440 aa18.23■□□□□ 0.51
SLX4-202ENST00000466154 ATP1A1P05023 1023 aaKnown RBP18.22■□□□□ 0.51
SLX4-202ENST00000466154 SMC1AQ14683 1233 aaKnown RBP18.22■□□□□ 0.51
SLX4-202ENST00000466154 USH1GQ495M9 461 aa18.22■□□□□ 0.51
SLX4-202ENST00000466154 ANKRD13CQ8N6S4 541 aa18.22■□□□□ 0.51
SLX4-202ENST00000466154 ZNF507Q8TCN5 953 aa18.22■□□□□ 0.51
SLX4-202ENST00000466154 RAB34Q9BZG1 259 aa18.22■□□□□ 0.51
SLX4-202ENST00000466154 LACRTQ9GZZ8 138 aa18.22■□□□□ 0.51
SLX4-202ENST00000466154 PSTPIP2Q9H939 334 aa18.22■□□□□ 0.51
SLX4-202ENST00000466154 CAPN11Q9UMQ6 739 aa18.22■□□□□ 0.51
SLX4-202ENST00000466154 PPP1R11O60927 126 aaPredicted RBP18.22■□□□□ 0.51
SLX4-202ENST00000466154 HERVK_113P62684 666 aa18.22■□□□□ 0.51
SLX4-202ENST00000466154 FAM114A1Q8IWE2 563 aa18.22■□□□□ 0.51
SLX4-202ENST00000466154 CCDC42Q96M95 316 aa18.22■□□□□ 0.51
SLX4-202ENST00000466154 PNMA5Q96PV4 448 aa18.22■□□□□ 0.51
SLX4-202ENST00000466154 RIOX1Q9H6W3 641 aa18.22■□□□□ 0.51
SLX4-202ENST00000466154 BLOC1S4Q9NUP1 217 aa18.22■□□□□ 0.51
SLX4-202ENST00000466154 NPHP3-ACAD11A0A0J9YXS1 232 aa18.21■□□□□ 0.51
SLX4-202ENST00000466154 PHACTR2O75167 634 aa18.21■□□□□ 0.51
SLX4-202ENST00000466154 KRT18P05783 430 aaKnown RBP18.21■□□□□ 0.51
SLX4-202ENST00000466154 HLA-DOAP06340 250 aa18.21■□□□□ 0.51
SLX4-202ENST00000466154 SRGNP10124 158 aa18.21■□□□□ 0.51
SLX4-202ENST00000466154 NAP1L1P55209 391 aaKnown RBP18.21■□□□□ 0.51
SLX4-202ENST00000466154 ASPRV1Q53RT3 343 aa18.21■□□□□ 0.51
SLX4-202ENST00000466154 C7orf25Q9BPX7 421 aa18.21■□□□□ 0.51
SLX4-202ENST00000466154 CRACR2AQ9BSW2 395 aa18.21■□□□□ 0.51
SLX4-202ENST00000466154 ANKZF1Q9H8Y5 726 aa18.21■□□□□ 0.51
SLX4-202ENST00000466154 RCCD1A6NED2 376 aa18.21■□□□□ 0.51
SLX4-202ENST00000466154 POLRMTO00411 1230 aaKnown RBP18.21■□□□□ 0.51
SLX4-202ENST00000466154 CYLC1P35663 651 aaPredicted RBP18.21■□□□□ 0.51
SLX4-202ENST00000466154 MRPS25P82663 173 aaKnown RBP18.21■□□□□ 0.51
SLX4-202ENST00000466154 ARID5AQ03989 594 aa18.21■□□□□ 0.51
SLX4-202ENST00000466154 ECM1Q16610 540 aa18.21■□□□□ 0.51
SLX4-202ENST00000466154 CDC42EP5Q6NZY7 148 aa18.21■□□□□ 0.51
SLX4-202ENST00000466154 CUEDC2Q9H467 287 aa18.21■□□□□ 0.51
SLX4-202ENST00000466154 DLEC1Q9Y238 1755 aa18.21■□□□□ 0.51
SLX4-202ENST00000466154 GDF11O95390 407 aa18.21■□□□□ 0.51
SLX4-202ENST00000466154 STAT3P40763 770 aa18.21■□□□□ 0.51
SLX4-202ENST00000466154 RRAGAQ7L523 313 aa18.21■□□□□ 0.51
SLX4-202ENST00000466154 CERS3Q8IU89 383 aa18.21■□□□□ 0.51
SLX4-202ENST00000466154 CERKQ8TCT0 537 aa18.21■□□□□ 0.51
SLX4-202ENST00000466154 CUL5Q93034 780 aa18.21■□□□□ 0.51
SLX4-202ENST00000466154 NLRC4Q9NPP4 1024 aa18.21■□□□□ 0.51
SLX4-202ENST00000466154 LTBP4Q8N2S1 1624 aa18.2■□□□□ 0.5
SLX4-202ENST00000466154 FAM170AA1A519 330 aa18.2■□□□□ 0.5
SLX4-202ENST00000466154 E9PMD0 336 aa18.2■□□□□ 0.5
SLX4-202ENST00000466154 EPHB6O15197 1021 aa18.2■□□□□ 0.5
SLX4-202ENST00000466154 ZNF185O15231 689 aa18.2■□□□□ 0.5
SLX4-202ENST00000466154 MYL1P05976 194 aa18.2■□□□□ 0.5
SLX4-202ENST00000466154 MATR3P43243 847 aaKnown RBP eCLIP18.2■□□□□ 0.5
SLX4-202ENST00000466154 ZNF543Q08ER8 600 aa18.2■□□□□ 0.5
SLX4-202ENST00000466154 PCDHA12Q9UN75 941 aa18.2■□□□□ 0.5
SLX4-202ENST00000466154 GAKO14976 1311 aa18.2■□□□□ 0.5
SLX4-202ENST00000466154 TRAF5O00463 557 aa18.2■□□□□ 0.5
SLX4-202ENST00000466154 SLC1A4P43007 532 aa18.2■□□□□ 0.5
SLX4-202ENST00000466154 VSNL1P62760 191 aa18.2■□□□□ 0.5
SLX4-202ENST00000466154 SPA17Q15506 151 aa18.2■□□□□ 0.5
SLX4-202ENST00000466154 ABCB6Q9NP58 842 aa18.2■□□□□ 0.5
SLX4-202ENST00000466154 KIAA1024Q9UPX6 916 aa18.2■□□□□ 0.5
SLX4-202ENST00000466154 PNMA6FA0A0J9YX94 578 aa18.19■□□□□ 0.5
SLX4-202ENST00000466154 KRT86O43790 486 aa18.19■□□□□ 0.5
SLX4-202ENST00000466154 ADRA2BP18089 450 aa18.19■□□□□ 0.5
SLX4-202ENST00000466154 TNNT3P45378 269 aaPredicted RBP18.19■□□□□ 0.5
SLX4-202ENST00000466154 CCDC40Q4G0X9 1142 aa18.19■□□□□ 0.5
SLX4-202ENST00000466154 AEBP2Q6ZN18 517 aaPredicted RBP18.19■□□□□ 0.5
SLX4-202ENST00000466154 CACNA2D4Q7Z3S7 1137 aa18.19■□□□□ 0.5
SLX4-202ENST00000466154 TEKT1Q969V4 418 aa18.19■□□□□ 0.5
SLX4-202ENST00000466154 AKR1B10O60218 316 aa18.19■□□□□ 0.5
SLX4-202ENST00000466154 KRT83P78385 493 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms