RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 RNF113AO15541 343 aaKnown RBP10.07□□□□□ -0.8
DDR1-242ENST00000465966 GPAA1O43292 621 aa10.07□□□□□ -0.8
DDR1-242ENST00000465966 PTGS1P23219 599 aa10.07□□□□□ -0.8
DDR1-242ENST00000465966 PTPN11Q06124 597 aaPredicted RBP10.07□□□□□ -0.8
DDR1-242ENST00000465966 GRB10Q13322 594 aa10.07□□□□□ -0.8
DDR1-242ENST00000465966 NBPF20Q3BBV1 942 aa10.07□□□□□ -0.8
DDR1-242ENST00000465966 MUM1L1Q5H9M0 696 aa10.07□□□□□ -0.8
DDR1-242ENST00000465966 ZMYM1Q5SVZ6 1142 aa10.07□□□□□ -0.8
DDR1-242ENST00000465966 KRT40Q6A162 431 aa10.07□□□□□ -0.8
DDR1-242ENST00000465966 RCSD1Q6JBY9 416 aa10.07□□□□□ -0.8
DDR1-242ENST00000465966 IFNL3Q8IZI9 196 aa10.07□□□□□ -0.8
DDR1-242ENST00000465966 CCDC155Q8N6L0 562 aa10.07□□□□□ -0.8
DDR1-242ENST00000465966 OR6J1Q8NGC5 347 aa10.07□□□□□ -0.8
DDR1-242ENST00000465966 OSBP2Q969R2 916 aa10.07□□□□□ -0.8
DDR1-242ENST00000465966 CHMP4CQ96CF2 233 aa10.07□□□□□ -0.8
DDR1-242ENST00000465966 SEC62Q99442 399 aaKnown RBP10.07□□□□□ -0.8
DDR1-242ENST00000465966 ZBED2Q9BTP6 218 aa10.07□□□□□ -0.8
DDR1-242ENST00000465966 LMCD1Q9NZU5 365 aa10.07□□□□□ -0.8
DDR1-242ENST00000465966 STX8Q9UNK0 236 aa10.07□□□□□ -0.8
DDR1-242ENST00000465966 LAMA4Q16363 1823 aa10.07□□□□□ -0.8
DDR1-242ENST00000465966 PLXNA1Q9UIW2 1896 aa10.06□□□□□ -0.8
DDR1-242ENST00000465966 PLIN4Q96Q06 1357 aa10.06□□□□□ -0.8
DDR1-242ENST00000465966 TSPY2A6NKD2 308 aa10.06□□□□□ -0.8
DDR1-242ENST00000465966 B4DLN1 442 aa10.06□□□□□ -0.8
DDR1-242ENST00000465966 PI4K2BG5E9Z4 385 aa10.06□□□□□ -0.8
DDR1-242ENST00000465966 EPB41L2O43491 1005 aaKnown RBP10.06□□□□□ -0.8
DDR1-242ENST00000465966 ICAM1P05362 532 aa10.06□□□□□ -0.8
DDR1-242ENST00000465966 MRPL12P52815 198 aaKnown RBP10.06□□□□□ -0.8
DDR1-242ENST00000465966 PTH1RQ03431 593 aa10.06□□□□□ -0.8
DDR1-242ENST00000465966 BAATQ14032 418 aaPredicted RBP10.06□□□□□ -0.8
DDR1-242ENST00000465966 PPP2R5BQ15173 497 aa10.06□□□□□ -0.8
DDR1-242ENST00000465966 TMEM63BQ5T3F8 832 aa10.06□□□□□ -0.8
DDR1-242ENST00000465966 KCTD1Q719H9 257 aa10.06□□□□□ -0.8
DDR1-242ENST00000465966 TICAM2Q86XR7 235 aa10.06□□□□□ -0.8
DDR1-242ENST00000465966 IPO9Q96P70 1041 aaKnown RBP10.06□□□□□ -0.8
DDR1-242ENST00000465966 NAPBQ9H115 298 aa10.06□□□□□ -0.8
DDR1-242ENST00000465966 EPB41L4AQ9HCS5 686 aaPredicted RBP10.06□□□□□ -0.8
DDR1-242ENST00000465966 PNMA2Q9UL42 364 aa10.06□□□□□ -0.8
DDR1-242ENST00000465966 PRR12Q9ULL5 1215 aa10.06□□□□□ -0.8
DDR1-242ENST00000465966 DDX49Q9Y6V7 483 aaKnown RBP10.06□□□□□ -0.8
DDR1-242ENST00000465966 ZNFX1Q9P2E3 1918 aaKnown RBP10.05□□□□□ -0.8
DDR1-242ENST00000465966 COL11A1P12107 1806 aaPredicted RBP10.05□□□□□ -0.8
DDR1-242ENST00000465966 PTPDC1A2A3K4 754 aa10.05□□□□□ -0.8
DDR1-242ENST00000465966 FAM86C2PA6NEL3 165 aa10.05□□□□□ -0.8
DDR1-242ENST00000465966 M0R2C6 588 aa10.05□□□□□ -0.8
DDR1-242ENST00000465966 PARNO95453 639 aaKnown RBP10.05□□□□□ -0.8
DDR1-242ENST00000465966 ALDH5A1P51649 535 aaPredicted RBP10.05□□□□□ -0.8
DDR1-242ENST00000465966 SNAP25P60880 206 aa10.05□□□□□ -0.8
DDR1-242ENST00000465966 PDE4DQ08499 809 aa10.05□□□□□ -0.8
DDR1-242ENST00000465966 CCDC96Q2M329 555 aa10.05□□□□□ -0.8
DDR1-242ENST00000465966 CAGE1Q8TC20 777 aa10.05□□□□□ -0.8
DDR1-242ENST00000465966 PARP14Q460N5 1801 aa10.05□□□□□ -0.8
DDR1-242ENST00000465966 RBM47A0AV96 593 aaKnown RBP10.04□□□□□ -0.8
DDR1-242ENST00000465966 PRR33A8MZF0 331 aa10.04□□□□□ -0.8
DDR1-242ENST00000465966 LPXNO60711 386 aa10.04□□□□□ -0.8
DDR1-242ENST00000465966 ALADP13716 330 aa10.04□□□□□ -0.8
DDR1-242ENST00000465966 HSPA4P34932 840 aa10.04□□□□□ -0.8
DDR1-242ENST00000465966 CHMP4BP1P59074 171 aa10.04□□□□□ -0.8
DDR1-242ENST00000465966 PPARAQ07869 468 aa10.04□□□□□ -0.8
DDR1-242ENST00000465966 PTGISQ16647 500 aa10.04□□□□□ -0.8
DDR1-242ENST00000465966 ALYREFQ86V81 257 aaKnown RBP10.04□□□□□ -0.8
DDR1-242ENST00000465966 GJD3Q8N144 294 aa10.04□□□□□ -0.8
DDR1-242ENST00000465966 AFAP1L1Q8TED9 768 aa10.04□□□□□ -0.8
DDR1-242ENST00000465966 SCFD2Q8WU76 684 aa10.04□□□□□ -0.8
DDR1-242ENST00000465966 DCAF4Q8WV16 495 aa10.04□□□□□ -0.8
DDR1-242ENST00000465966 IL17RAQ96F46 866 aa10.04□□□□□ -0.8
DDR1-242ENST00000465966 PURBQ96QR8 312 aaKnown RBP10.04□□□□□ -0.8
DDR1-242ENST00000465966 HELLSQ9NRZ9 838 aa10.04□□□□□ -0.8
DDR1-242ENST00000465966 MTMR7Q9Y216 660 aa10.04□□□□□ -0.8
DDR1-242ENST00000465966 A6NJR5 290 aa10.03□□□□□ -0.8
DDR1-242ENST00000465966 EFCAB14O75071 495 aa10.03□□□□□ -0.8
DDR1-242ENST00000465966 ARHGEF15O94989 841 aa10.03□□□□□ -0.8
DDR1-242ENST00000465966 TXNP10599 105 aaKnown RBP10.03□□□□□ -0.8
DDR1-242ENST00000465966 CALML3P27482 149 aa10.03□□□□□ -0.8
DDR1-242ENST00000465966 SSTR3P32745 418 aaPredicted RBP10.03□□□□□ -0.8
DDR1-242ENST00000465966 WDR5P61964 334 aaKnown RBP10.03□□□□□ -0.8
DDR1-242ENST00000465966 CSPP1Q1MSJ5 1256 aa10.03□□□□□ -0.8
DDR1-242ENST00000465966 PUS10Q3MIT2 529 aaKnown RBP10.03□□□□□ -0.8
DDR1-242ENST00000465966 MCMDC2Q4G0Z9 681 aa10.03□□□□□ -0.8
DDR1-242ENST00000465966 CNKSR3Q6P9H4 555 aa10.03□□□□□ -0.8
DDR1-242ENST00000465966 RNF207Q6ZRF8 634 aa10.03□□□□□ -0.8
DDR1-242ENST00000465966 GDPD5Q8WTR4 605 aa10.03□□□□□ -0.8
DDR1-242ENST00000465966 KHSRPQ92945 711 aaKnown RBP eCLIP10.03□□□□□ -0.8
DDR1-242ENST00000465966 UIMC1Q96RL1 719 aa10.03□□□□□ -0.8
DDR1-242ENST00000465966 TGS1Q96RS0 853 aaKnown RBP10.03□□□□□ -0.8
DDR1-242ENST00000465966 RAD9AQ99638 391 aa10.03□□□□□ -0.8
DDR1-242ENST00000465966 RANBP17Q9H2T7 1088 aaKnown RBP10.03□□□□□ -0.8
DDR1-242ENST00000465966 UBE2ZQ9H832 354 aaPredicted RBP10.03□□□□□ -0.8
DDR1-242ENST00000465966 C11orf16Q9NQ32 467 aa10.03□□□□□ -0.8
DDR1-242ENST00000465966 RBM8AQ9Y5S9 174 aaKnown RBP10.03□□□□□ -0.8
DDR1-242ENST00000465966 CHD9Q3L8U1 2897 aa10.03□□□□□ -0.8
DDR1-242ENST00000465966 ABHD14A-ACY1A0A1B0GW23 586 aa10.02□□□□□ -0.81
DDR1-242ENST00000465966 NFIBO00712 420 aa10.02□□□□□ -0.81
DDR1-242ENST00000465966 FOXP2O15409 715 aa10.02□□□□□ -0.81
DDR1-242ENST00000465966 CD2BP2O95400 341 aaKnown RBP10.02□□□□□ -0.81
DDR1-242ENST00000465966 SELPP16109 830 aa10.02□□□□□ -0.81
DDR1-242ENST00000465966 ANAPC15P60006 121 aa10.02□□□□□ -0.81
DDR1-242ENST00000465966 RABEP1Q15276 862 aa10.02□□□□□ -0.81
DDR1-242ENST00000465966 LEXMQ3ZCV2 418 aa10.02□□□□□ -0.81
DDR1-242ENST00000465966 VPS53Q5VIR6 699 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms