RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 ST3GAL1Q11201 340 aa21.15■□□□□ 0.98
HOXA9-203ENST00000465941 ACVR2BQ13705 512 aa21.15■□□□□ 0.98
HOXA9-203ENST00000465941 USP17L6PQ6QN14 398 aa21.15■□□□□ 0.98
HOXA9-203ENST00000465941 NSUN7Q8NE18 718 aaKnown RBP21.15■□□□□ 0.98
HOXA9-203ENST00000465941 KATNBL1Q9H079 304 aa21.15■□□□□ 0.98
HOXA9-203ENST00000465941 PXMP2Q9NR77 195 aa21.15■□□□□ 0.98
HOXA9-203ENST00000465941 CD2BP2O95400 341 aaKnown RBP21.14■□□□□ 0.97
HOXA9-203ENST00000465941 ARHGEF16Q5VV41 709 aa21.14■□□□□ 0.97
HOXA9-203ENST00000465941 FCHSD1Q86WN1 690 aa21.14■□□□□ 0.97
HOXA9-203ENST00000465941 FAM177A1Q8N128 213 aaPredicted RBP21.14■□□□□ 0.97
HOXA9-203ENST00000465941 SMARCC2Q8TAQ2 1214 aa21.14■□□□□ 0.97
HOXA9-203ENST00000465941 LLPHQ9BRT6 129 aaKnown RBP21.14■□□□□ 0.97
HOXA9-203ENST00000465941 ZMYND12Q9H0C1 365 aa21.14■□□□□ 0.97
HOXA9-203ENST00000465941 CENPFP49454 3210 aa21.14■□□□□ 0.97
HOXA9-203ENST00000465941 SEPT4O43236 478 aa21.13■□□□□ 0.97
HOXA9-203ENST00000465941 CAPN2P17655 700 aa21.13■□□□□ 0.97
HOXA9-203ENST00000465941 CNGA1P29973 690 aa21.13■□□□□ 0.97
HOXA9-203ENST00000465941 ADCY7P51828 1080 aa21.13■□□□□ 0.97
HOXA9-203ENST00000465941 PDE4DQ08499 809 aa21.13■□□□□ 0.97
HOXA9-203ENST00000465941 ORC3Q9UBD5 711 aaPredicted RBP21.13■□□□□ 0.97
HOXA9-203ENST00000465941 DDX49Q9Y6V7 483 aaKnown RBP21.13■□□□□ 0.97
HOXA9-203ENST00000465941 LCTP09848 1927 aa21.12■□□□□ 0.97
HOXA9-203ENST00000465941 MSCO60682 206 aa21.12■□□□□ 0.97
HOXA9-203ENST00000465941 SGPL1O95470 568 aa21.12■□□□□ 0.97
HOXA9-203ENST00000465941 FDPSP14324 419 aaKnown RBP21.12■□□□□ 0.97
HOXA9-203ENST00000465941 EIF2AK2P19525 551 aaKnown RBP21.12■□□□□ 0.97
HOXA9-203ENST00000465941 GJA8P48165 433 aa21.12■□□□□ 0.97
HOXA9-203ENST00000465941 LHX8Q68G74 356 aa21.12■□□□□ 0.97
HOXA9-203ENST00000465941 CCDC83Q8IWF9 413 aa21.12■□□□□ 0.97
HOXA9-203ENST00000465941 CCDC148Q8NFR7 591 aa21.12■□□□□ 0.97
HOXA9-203ENST00000465941 WASF1Q92558 559 aa21.12■□□□□ 0.97
HOXA9-203ENST00000465941 DEFB118Q96PH6 123 aa21.12■□□□□ 0.97
HOXA9-203ENST00000465941 PDCD2LQ9BRP1 358 aa21.12■□□□□ 0.97
HOXA9-203ENST00000465941 C6orf50Q9HD87 102 aa21.12■□□□□ 0.97
HOXA9-203ENST00000465941 VTA1Q9NP79 307 aa21.12■□□□□ 0.97
HOXA9-203ENST00000465941 VPS54Q9P1Q0 977 aa21.12■□□□□ 0.97
HOXA9-203ENST00000465941 DDX20Q9UHI6 824 aaKnown RBP21.12■□□□□ 0.97
HOXA9-203ENST00000465941 RBBP6Q7Z6E9 1792 aaKnown RBP21.12■□□□□ 0.97
HOXA9-203ENST00000465941 FRMPD4Q14CM0 1322 aa21.11■□□□□ 0.97
HOXA9-203ENST00000465941 NR3C2P08235 984 aa21.11■□□□□ 0.97
HOXA9-203ENST00000465941 GNA11P29992 359 aa21.11■□□□□ 0.97
HOXA9-203ENST00000465941 STXBP2Q15833 593 aa21.11■□□□□ 0.97
HOXA9-203ENST00000465941 UBE2SQ16763 222 aa21.11■□□□□ 0.97
HOXA9-203ENST00000465941 VSIG10LQ86VR7 867 aa21.11■□□□□ 0.97
HOXA9-203ENST00000465941 SHISA4Q96DD7 197 aa21.11■□□□□ 0.97
HOXA9-203ENST00000465941 TMX3Q96JJ7 454 aa21.11■□□□□ 0.97
HOXA9-203ENST00000465941 ZHX1Q9UKY1 873 aaPredicted RBP21.11■□□□□ 0.97
HOXA9-203ENST00000465941 FAM184BQ9ULE4 1060 aa21.11■□□□□ 0.97
HOXA9-203ENST00000465941 POTEFA5A3E0 1075 aa21.1■□□□□ 0.97
HOXA9-203ENST00000465941 EIF3JO75822 258 aaKnown RBP21.1■□□□□ 0.97
HOXA9-203ENST00000465941 FOSP01100 380 aaPredicted RBP21.1■□□□□ 0.97
HOXA9-203ENST00000465941 AKR1A1P14550 325 aa21.1■□□□□ 0.97
HOXA9-203ENST00000465941 CLK2P49760 499 aaKnown RBP21.1■□□□□ 0.97
HOXA9-203ENST00000465941 PGM5Q15124 567 aa21.1■□□□□ 0.97
HOXA9-203ENST00000465941 CCDC144BQ3MJ40 725 aa21.1■□□□□ 0.97
HOXA9-203ENST00000465941 TAPT1Q6NXT6 567 aa21.1■□□□□ 0.97
HOXA9-203ENST00000465941 U2AF1L4Q8WU68 220 aaKnown RBP21.1■□□□□ 0.97
HOXA9-203ENST00000465941 AIFM3Q96NN9 605 aa21.1■□□□□ 0.97
HOXA9-203ENST00000465941 CRISPLD2Q9H0B8 497 aa21.1■□□□□ 0.97
HOXA9-203ENST00000465941 SPDYE3A6NKU9 549 aa21.09■□□□□ 0.97
HOXA9-203ENST00000465941 JAK2O60674 1132 aa21.09■□□□□ 0.97
HOXA9-203ENST00000465941 DTNBO60941 627 aa21.09■□□□□ 0.97
HOXA9-203ENST00000465941 XBP1P17861 261 aa21.09■□□□□ 0.97
HOXA9-203ENST00000465941 NLRP5P59047 1200 aa21.09■□□□□ 0.97
HOXA9-203ENST00000465941 MCTP2Q6DN12 878 aa21.09■□□□□ 0.97
HOXA9-203ENST00000465941 IQSEC1Q6DN90 963 aa21.09■□□□□ 0.97
HOXA9-203ENST00000465941 GALNT17Q6IS24 598 aa21.09■□□□□ 0.97
HOXA9-203ENST00000465941 EEPD1Q7L9B9 569 aa21.09■□□□□ 0.97
HOXA9-203ENST00000465941 FBXO16Q8IX29 292 aaPredicted RBP21.09■□□□□ 0.97
HOXA9-203ENST00000465941 BICD2Q8TD16 824 aa21.09■□□□□ 0.97
HOXA9-203ENST00000465941 OGDHLQ9ULD0 1010 aa21.09■□□□□ 0.97
HOXA9-203ENST00000465941 PCDHA6Q9UN73 950 aa21.09■□□□□ 0.97
HOXA9-203ENST00000465941 PCDHA8Q9Y5H6 950 aa21.09■□□□□ 0.97
HOXA9-203ENST00000465941 RBM47A0AV96 593 aaKnown RBP21.08■□□□□ 0.97
HOXA9-203ENST00000465941 CCND2P30279 289 aa21.08■□□□□ 0.97
HOXA9-203ENST00000465941 AP3B2Q13367 1082 aa21.08■□□□□ 0.97
HOXA9-203ENST00000465941 XRRA1Q6P2D8 792 aa21.08■□□□□ 0.97
HOXA9-203ENST00000465941 IL31RAQ8NI17 732 aa21.08■□□□□ 0.97
HOXA9-203ENST00000465941 PDGFCQ9NRA1 345 aa21.08■□□□□ 0.97
HOXA9-203ENST00000465941 STAM2O75886 525 aa21.07■□□□□ 0.96
HOXA9-203ENST00000465941 TFRCP02786 760 aaKnown RBP21.07■□□□□ 0.96
HOXA9-203ENST00000465941 MYCLP12524 364 aaPredicted RBP21.07■□□□□ 0.96
HOXA9-203ENST00000465941 EN2P19622 333 aaPredicted RBP21.07■□□□□ 0.96
HOXA9-203ENST00000465941 SOX10P56693 466 aa21.07■□□□□ 0.96
HOXA9-203ENST00000465941 HMGN5P82970 282 aaKnown RBP21.07■□□□□ 0.96
HOXA9-203ENST00000465941 PCNX4Q63HM2 1172 aa21.07■□□□□ 0.96
HOXA9-203ENST00000465941 REXO1Q8N1G1 1221 aaKnown RBP21.07■□□□□ 0.96
HOXA9-203ENST00000465941 ALG1Q9BT22 464 aa21.07■□□□□ 0.96
HOXA9-203ENST00000465941 PHF20Q9BVI0 1012 aa21.07■□□□□ 0.96
HOXA9-203ENST00000465941 EHMT1Q9H9B1 1298 aa21.07■□□□□ 0.96
HOXA9-203ENST00000465941 ADAMTS3O15072 1205 aa21.06■□□□□ 0.96
HOXA9-203ENST00000465941 DUSP11O75319 330 aaKnown RBP21.06■□□□□ 0.96
HOXA9-203ENST00000465941 RARBP10826 455 aa21.06■□□□□ 0.96
HOXA9-203ENST00000465941 ADCYAP1R1P41586 468 aa21.06■□□□□ 0.96
HOXA9-203ENST00000465941 TNFAIP2Q03169 654 aa21.06■□□□□ 0.96
HOXA9-203ENST00000465941 DAGLBQ8NCG7 672 aa21.06■□□□□ 0.96
HOXA9-203ENST00000465941 SCFD2Q8WU76 684 aa21.06■□□□□ 0.96
HOXA9-203ENST00000465941 TMEM260Q9NX78 707 aa21.06■□□□□ 0.96
HOXA9-203ENST00000465941 PCDHA4Q9UN74 947 aa21.06■□□□□ 0.96
HOXA9-203ENST00000465941 MRPS9P82933 396 aaKnown RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms