RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 SMPD1P17405 629 aa29.91■■■□□ 2.38
SMC4-206ENST00000465903 IRX5P78411 483 aaPredicted RBP29.91■■■□□ 2.38
SMC4-206ENST00000465903 KLHDC9Q8NEP7 349 aa29.91■■■□□ 2.38
SMC4-206ENST00000465903 IWS1Q96ST2 819 aa29.91■■■□□ 2.38
SMC4-206ENST00000465903 MPHOSPH6Q99547 160 aaKnown RBP29.91■■■□□ 2.38
SMC4-206ENST00000465903 B4DLN1 442 aa29.9■■■□□ 2.38
SMC4-206ENST00000465903 MYCNP04198 464 aaPredicted RBP29.9■■■□□ 2.38
SMC4-206ENST00000465903 PTGS1P23219 599 aa29.9■■■□□ 2.38
SMC4-206ENST00000465903 MRPL12P52815 198 aaKnown RBP29.9■■■□□ 2.38
SMC4-206ENST00000465903 GJA9P57773 515 aa29.9■■■□□ 2.38
SMC4-206ENST00000465903 DPF3Q92784 378 aa29.9■■■□□ 2.38
SMC4-206ENST00000465903 UPF3AQ9H1J1 476 aaKnown RBP29.9■■■□□ 2.38
SMC4-206ENST00000465903 CCDC196A0A1B0GTZ2 297 aa29.89■■■□□ 2.38
SMC4-206ENST00000465903 MYADML2A6NDP7 307 aa29.89■■■□□ 2.38
SMC4-206ENST00000465903 CTAGE5O15320 804 aa29.89■■■□□ 2.38
SMC4-206ENST00000465903 EIF2AK2P19525 551 aaKnown RBP29.89■■■□□ 2.38
SMC4-206ENST00000465903 NTRK3Q16288 839 aa29.89■■■□□ 2.38
SMC4-206ENST00000465903 ARHGEF16Q5VV41 709 aa29.89■■■□□ 2.38
SMC4-206ENST00000465903 CCSAPQ6IQ19 270 aaPredicted RBP29.89■■■□□ 2.38
SMC4-206ENST00000465903 RNF180Q86T96 592 aa29.89■■■□□ 2.38
SMC4-206ENST00000465903 GPKOWQ92917 476 aaPredicted RBP eCLIP29.89■■■□□ 2.38
SMC4-206ENST00000465903 SENP6Q9GZR1 1112 aaPredicted RBP29.89■■■□□ 2.38
SMC4-206ENST00000465903 ALDH8A1Q9H2A2 487 aaPredicted RBP29.89■■■□□ 2.38
SMC4-206ENST00000465903 MEIS2O14770 477 aa29.88■■■□□ 2.37
SMC4-206ENST00000465903 NR3C2P08235 984 aa29.88■■■□□ 2.37
SMC4-206ENST00000465903 NKX3-2P78367 333 aa29.88■■■□□ 2.37
SMC4-206ENST00000465903 CCT2P78371 535 aaKnown RBP29.88■■■□□ 2.37
SMC4-206ENST00000465903 FCHSD1Q86WN1 690 aa29.88■■■□□ 2.37
SMC4-206ENST00000465903 ZNF274Q96GC6 653 aaPredicted RBP29.88■■■□□ 2.37
SMC4-206ENST00000465903 PDCD2LQ9BRP1 358 aa29.88■■■□□ 2.37
SMC4-206ENST00000465903 CEP290O15078 2479 aa29.87■■■□□ 2.37
SMC4-206ENST00000465903 KBTBD13C9JR72 458 aa29.87■■■□□ 2.37
SMC4-206ENST00000465903 WWC2Q6AWC2 1192 aa29.87■■■□□ 2.37
SMC4-206ENST00000465903 TYW1BQ6NUM6 668 aa29.87■■■□□ 2.37
SMC4-206ENST00000465903 USP17L6PQ6QN14 398 aa29.87■■■□□ 2.37
SMC4-206ENST00000465903 NCOA5Q9HCD5 579 aaKnown RBP29.87■■■□□ 2.37
SMC4-206ENST00000465903 PHF24Q9UPV7 400 aa29.87■■■□□ 2.37
SMC4-206ENST00000465903 MYH7BA7E2Y1 1941 aa29.86■■■□□ 2.37
SMC4-206ENST00000465903 PIK3CDO00329 1044 aa29.86■■■□□ 2.37
SMC4-206ENST00000465903 STXBP2Q15833 593 aa29.86■■■□□ 2.37
SMC4-206ENST00000465903 DUSP28Q4G0W2 176 aa29.86■■■□□ 2.37
SMC4-206ENST00000465903 HEATR3Q7Z4Q2 680 aa29.86■■■□□ 2.37
SMC4-206ENST00000465903 WDR11Q9BZH6 1224 aa29.86■■■□□ 2.37
SMC4-206ENST00000465903 DNAH12Q6ZR08 3092 aa29.86■■■□□ 2.37
SMC4-206ENST00000465903 C6orf222P0C671 652 aaPredicted RBP29.85■■■□□ 2.37
SMC4-206ENST00000465903 CST5P28325 142 aaPredicted RBP29.85■■■□□ 2.37
SMC4-206ENST00000465903 PGM5Q15124 567 aa29.85■■■□□ 2.37
SMC4-206ENST00000465903 LRRC26Q2I0M4 334 aa29.85■■■□□ 2.37
SMC4-206ENST00000465903 NOL8Q76FK4 1167 aaKnown RBP29.85■■■□□ 2.37
SMC4-206ENST00000465903 IL31RAQ8NI17 732 aa29.85■■■□□ 2.37
SMC4-206ENST00000465903 FERMT2Q96AC1 680 aa29.85■■■□□ 2.37
SMC4-206ENST00000465903 TSEN34Q9BSV6 310 aaKnown RBP29.85■■■□□ 2.37
SMC4-206ENST00000465903 PSTPIP2Q9H939 334 aa29.85■■■□□ 2.37
SMC4-206ENST00000465903 Q9Y3F1 56 aa29.85■■■□□ 2.37
SMC4-206ENST00000465903 DYNC1LI2O43237 492 aaPredicted RBP29.84■■■□□ 2.37
SMC4-206ENST00000465903 PRPF3O43395 683 aaKnown RBP29.84■■■□□ 2.37
SMC4-206ENST00000465903 KCNA10Q16322 511 aa29.84■■■□□ 2.37
SMC4-206ENST00000465903 PKN1Q16512 942 aa29.84■■■□□ 2.37
SMC4-206ENST00000465903 VSIG10LQ86VR7 867 aa29.84■■■□□ 2.37
SMC4-206ENST00000465903 FRMPD4Q14CM0 1322 aa29.83■■■□□ 2.37
SMC4-206ENST00000465903 STXBP3O00186 592 aa29.83■■■□□ 2.37
SMC4-206ENST00000465903 EIF3JO75822 258 aaKnown RBP29.83■■■□□ 2.37
SMC4-206ENST00000465903 ARIH2O95376 493 aa29.83■■■□□ 2.37
SMC4-206ENST00000465903 PFKFB3Q16875 520 aaPredicted RBP29.83■■■□□ 2.37
SMC4-206ENST00000465903 CCDC62Q6P9F0 684 aa29.83■■■□□ 2.37
SMC4-206ENST00000465903 TLK2Q86UE8 772 aa29.83■■■□□ 2.37
SMC4-206ENST00000465903 SMARCC2Q8TAQ2 1214 aa29.83■■■□□ 2.37
SMC4-206ENST00000465903 SCFD2Q8WU76 684 aa29.83■■■□□ 2.37
SMC4-206ENST00000465903 PHKBQ93100 1093 aa29.83■■■□□ 2.37
SMC4-206ENST00000465903 GTF3C3Q9Y5Q9 886 aa29.83■■■□□ 2.37
SMC4-206ENST00000465903 MYCLP12524 364 aaPredicted RBP29.82■■■□□ 2.36
SMC4-206ENST00000465903 IFNAR1P17181 557 aa29.82■■■□□ 2.36
SMC4-206ENST00000465903 AK2P54819 239 aa29.82■■■□□ 2.36
SMC4-206ENST00000465903 BEX3Q00994 111 aa29.82■■■□□ 2.36
SMC4-206ENST00000465903 SLC39A5Q6ZMH5 540 aa29.82■■■□□ 2.36
SMC4-206ENST00000465903 SEPT14Q6ZU15 432 aa29.82■■■□□ 2.36
SMC4-206ENST00000465903 CUL5Q93034 780 aa29.82■■■□□ 2.36
SMC4-206ENST00000465903 SPC25Q9HBM1 224 aa29.82■■■□□ 2.36
SMC4-206ENST00000465903 BARHL2Q9NY43 387 aa29.82■■■□□ 2.36
SMC4-206ENST00000465903 hCG_1984214I3L0E3 225 aa29.81■■■□□ 2.36
SMC4-206ENST00000465903 EVI5O60447 810 aa29.81■■■□□ 2.36
SMC4-206ENST00000465903 PPFIA3O75145 1194 aa29.81■■■□□ 2.36
SMC4-206ENST00000465903 RGS20O76081 388 aa29.81■■■□□ 2.36
SMC4-206ENST00000465903 ACLYP53396 1101 aa29.81■■■□□ 2.36
SMC4-206ENST00000465903 ATN1P54259 1190 aaPredicted RBP29.81■■■□□ 2.36
SMC4-206ENST00000465903 GNASQ5JWF2 1037 aa29.81■■■□□ 2.36
SMC4-206ENST00000465903 ZNF713Q8N859 430 aaPredicted RBP29.81■■■□□ 2.36
SMC4-206ENST00000465903 COPS5Q92905 334 aa29.81■■■□□ 2.36
SMC4-206ENST00000465903 ZFP91Q96JP5 570 aaPredicted RBP29.81■■■□□ 2.36
SMC4-206ENST00000465903 AP5M1Q9H0R1 490 aa29.81■■■□□ 2.36
SMC4-206ENST00000465903 TPCN1Q9ULQ1 816 aa29.81■■■□□ 2.36
SMC4-206ENST00000465903 A0A1W2PQ45 241 aaPredicted RBP29.8■■■□□ 2.36
SMC4-206ENST00000465903 A0A1W2PQY0 241 aa29.8■■■□□ 2.36
SMC4-206ENST00000465903 NAPAP54920 295 aa29.8■■■□□ 2.36
SMC4-206ENST00000465903 STK3Q13188 491 aa29.8■■■□□ 2.36
SMC4-206ENST00000465903 UBE2SQ16763 222 aa29.8■■■□□ 2.36
SMC4-206ENST00000465903 PPP1R18Q6NYC8 613 aa29.8■■■□□ 2.36
SMC4-206ENST00000465903 PCSK9Q8NBP7 692 aaKnown RBP29.8■■■□□ 2.36
SMC4-206ENST00000465903 MOXD2PA6NHM9 499 aa29.79■■■□□ 2.36
SMC4-206ENST00000465903 ASGR1P07306 291 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms