RNA–Protein interactions for RNA: ENST00000465780.1

RBBP4-209, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-209ENST00000465780 VTA1Q9NP79 307 aa12.31□□□□□ -0.44
RBBP4-209ENST00000465780 RBM27Q9P2N5 1060 aaKnown RBP12.31□□□□□ -0.44
RBBP4-209ENST00000465780 FAM184BQ9ULE4 1060 aa12.31□□□□□ -0.44
RBBP4-209ENST00000465780 CEP290O15078 2479 aa12.31□□□□□ -0.44
RBBP4-209ENST00000465780 hCG_1984214I3L0E3 225 aa12.3□□□□□ -0.44
RBBP4-209ENST00000465780 RARBP10826 455 aa12.3□□□□□ -0.44
RBBP4-209ENST00000465780 PDIA3P30101 505 aaKnown RBP12.3□□□□□ -0.44
RBBP4-209ENST00000465780 CDC27P30260 824 aa12.3□□□□□ -0.44
RBBP4-209ENST00000465780 ANKRD1Q15327 319 aa12.3□□□□□ -0.44
RBBP4-209ENST00000465780 CMTR1Q8N1G2 835 aaKnown RBP12.3□□□□□ -0.44
RBBP4-209ENST00000465780 PIP4P2Q8N4L2 257 aa12.3□□□□□ -0.44
RBBP4-209ENST00000465780 ZNF713Q8N859 430 aaPredicted RBP12.3□□□□□ -0.44
RBBP4-209ENST00000465780 NSUN6Q8TEA1 469 aaKnown RBP12.3□□□□□ -0.44
RBBP4-209ENST00000465780 TBC1D5Q92609 795 aa12.3□□□□□ -0.44
RBBP4-209ENST00000465780 IWS1Q96ST2 819 aa12.3□□□□□ -0.44
RBBP4-209ENST00000465780 ZHX1Q9UKY1 873 aaPredicted RBP12.3□□□□□ -0.44
RBBP4-209ENST00000465780 NAP1L2Q9ULW6 460 aaPredicted RBP12.3□□□□□ -0.44
RBBP4-209ENST00000465780 GTF3C3Q9Y5Q9 886 aa12.3□□□□□ -0.44
RBBP4-209ENST00000465780 KIAA1217Q5T5P2 1943 aa12.3□□□□□ -0.44
RBBP4-209ENST00000465780 GCOM1H8Y6P7 765 aaPredicted RBP12.29□□□□□ -0.44
RBBP4-209ENST00000465780 PIK3CDO00329 1044 aa12.29□□□□□ -0.44
RBBP4-209ENST00000465780 DUSP11O75319 330 aaKnown RBP12.29□□□□□ -0.44
RBBP4-209ENST00000465780 CFBP00751 764 aa12.29□□□□□ -0.44
RBBP4-209ENST00000465780 POLR2MP0CAP2 368 aa12.29□□□□□ -0.44
RBBP4-209ENST00000465780 ADD1P35611 737 aaKnown RBP12.29□□□□□ -0.44
RBBP4-209ENST00000465780 PPP1R18Q6NYC8 613 aa12.29□□□□□ -0.44
RBBP4-209ENST00000465780 CCDC82Q8N4S0 544 aa12.29□□□□□ -0.44
RBBP4-209ENST00000465780 ARRDC4Q8NCT1 418 aa12.29□□□□□ -0.44
RBBP4-209ENST00000465780 PIBF1Q8WXW3 757 aa12.29□□□□□ -0.44
RBBP4-209ENST00000465780 PURBQ96QR8 312 aaKnown RBP12.29□□□□□ -0.44
RBBP4-209ENST00000465780 RMDN3Q96TC7 470 aa12.29□□□□□ -0.44
RBBP4-209ENST00000465780 DNAH12Q6ZR08 3092 aa12.29□□□□□ -0.44
RBBP4-209ENST00000465780 RBM47A0AV96 593 aaKnown RBP12.28□□□□□ -0.44
RBBP4-209ENST00000465780 DNM1LO00429 736 aa12.28□□□□□ -0.44
RBBP4-209ENST00000465780 IFNAR1P17181 557 aa12.28□□□□□ -0.44
RBBP4-209ENST00000465780 PDE4DQ08499 809 aa12.28□□□□□ -0.44
RBBP4-209ENST00000465780 CCDC144BQ3MJ40 725 aa12.28□□□□□ -0.44
RBBP4-209ENST00000465780 IQSEC1Q6DN90 963 aa12.28□□□□□ -0.44
RBBP4-209ENST00000465780 TAPT1Q6NXT6 567 aa12.28□□□□□ -0.44
RBBP4-209ENST00000465780 NECAB2Q7Z6G3 386 aa12.28□□□□□ -0.44
RBBP4-209ENST00000465780 CUL5Q93034 780 aa12.28□□□□□ -0.44
RBBP4-209ENST00000465780 TAAR1Q96RJ0 339 aa12.28□□□□□ -0.44
RBBP4-209ENST00000465780 PXMP2Q9NR77 195 aa12.28□□□□□ -0.44
RBBP4-209ENST00000465780 COL20A1Q9P218 1284 aa12.28□□□□□ -0.44
RBBP4-209ENST00000465780 V9GY48 417 aaPredicted RBP12.28□□□□□ -0.44
RBBP4-209ENST00000465780 PRPF3O43395 683 aaKnown RBP12.27□□□□□ -0.45
RBBP4-209ENST00000465780 RBM25P49756 843 aaKnown RBP12.27□□□□□ -0.45
RBBP4-209ENST00000465780 NKX3-2P78367 333 aa12.27□□□□□ -0.45
RBBP4-209ENST00000465780 LRRC41Q15345 812 aa12.27□□□□□ -0.45
RBBP4-209ENST00000465780 NTRK3Q16288 839 aa12.27□□□□□ -0.45
RBBP4-209ENST00000465780 PFKFB3Q16875 520 aaPredicted RBP12.27□□□□□ -0.45
RBBP4-209ENST00000465780 ARHGEF16Q5VV41 709 aa12.27□□□□□ -0.45
RBBP4-209ENST00000465780 IL27Q8NEV9 243 aa12.27□□□□□ -0.45
RBBP4-209ENST00000465780 PAWRQ96IZ0 340 aaKnown RBP12.27□□□□□ -0.45
RBBP4-209ENST00000465780 HTATIP2Q9BUP3 242 aa12.27□□□□□ -0.45
RBBP4-209ENST00000465780 RNF26Q9BY78 433 aaPredicted RBP12.27□□□□□ -0.45
RBBP4-209ENST00000465780 GLT8D2Q9H1C3 349 aa12.27□□□□□ -0.45
RBBP4-209ENST00000465780 UPF3AQ9H1J1 476 aaKnown RBP12.27□□□□□ -0.45
RBBP4-209ENST00000465780 XPNPEP3Q9NQH7 507 aa12.27□□□□□ -0.45
RBBP4-209ENST00000465780 Q9Y3F1 56 aa12.27□□□□□ -0.45
RBBP4-209ENST00000465780 FRMPD4Q14CM0 1322 aa12.27□□□□□ -0.45
RBBP4-209ENST00000465780 hCG_1642624A0A1W2PR95 340 aa12.26□□□□□ -0.45
RBBP4-209ENST00000465780 KBTBD13C9JR72 458 aa12.26□□□□□ -0.45
RBBP4-209ENST00000465780 MEIS2O14770 477 aa12.26□□□□□ -0.45
RBBP4-209ENST00000465780 NR3C2P08235 984 aa12.26□□□□□ -0.45
RBBP4-209ENST00000465780 COL6A1P12109 1028 aa12.26□□□□□ -0.45
RBBP4-209ENST00000465780 CST5P28325 142 aaPredicted RBP12.26□□□□□ -0.45
RBBP4-209ENST00000465780 HOXA13P31271 388 aaPredicted RBP12.26□□□□□ -0.45
RBBP4-209ENST00000465780 AK2P54819 239 aa12.26□□□□□ -0.45
RBBP4-209ENST00000465780 GJA9P57773 515 aa12.26□□□□□ -0.45
RBBP4-209ENST00000465780 AKAP17AQ02040 695 aaKnown RBP12.26□□□□□ -0.45
RBBP4-209ENST00000465780 TNFAIP2Q03169 654 aa12.26□□□□□ -0.45
RBBP4-209ENST00000465780 STXBP2Q15833 593 aa12.26□□□□□ -0.45
RBBP4-209ENST00000465780 ANO1Q5XXA6 986 aa12.26□□□□□ -0.45
RBBP4-209ENST00000465780 WWC2Q6AWC2 1192 aa12.26□□□□□ -0.45
RBBP4-209ENST00000465780 CPLX2Q6PUV4 134 aaKnown RBP12.26□□□□□ -0.45
RBBP4-209ENST00000465780 HEATR3Q7Z4Q2 680 aa12.26□□□□□ -0.45
RBBP4-209ENST00000465780 RNF180Q86T96 592 aa12.26□□□□□ -0.45
RBBP4-209ENST00000465780 FBXO16Q8IX29 292 aaPredicted RBP12.26□□□□□ -0.45
RBBP4-209ENST00000465780 SCFD2Q8WU76 684 aa12.26□□□□□ -0.45
RBBP4-209ENST00000465780 PDCD2LQ9BRP1 358 aa12.26□□□□□ -0.45
RBBP4-209ENST00000465780 TSEN34Q9BSV6 310 aaKnown RBP12.26□□□□□ -0.45
RBBP4-209ENST00000465780 C22orf23Q9BZE7 217 aa12.26□□□□□ -0.45
RBBP4-209ENST00000465780 C11orf49Q9H6J7 331 aa12.26□□□□□ -0.45
RBBP4-209ENST00000465780 PSTPIP2Q9H939 334 aa12.26□□□□□ -0.45
RBBP4-209ENST00000465780 UPF2Q9HAU5 1272 aaKnown RBP12.26□□□□□ -0.45
RBBP4-209ENST00000465780 SPC25Q9HBM1 224 aa12.26□□□□□ -0.45
RBBP4-209ENST00000465780 BARHL2Q9NY43 387 aa12.26□□□□□ -0.45
RBBP4-209ENST00000465780 GNEQ9Y223 722 aaKnown RBP12.26□□□□□ -0.45
RBBP4-209ENST00000465780 STXBP3O00186 592 aa12.25□□□□□ -0.45
RBBP4-209ENST00000465780 CPLX1O14810 134 aa12.25□□□□□ -0.45
RBBP4-209ENST00000465780 NKRFO15226 690 aaKnown RBP eCLIP12.25□□□□□ -0.45
RBBP4-209ENST00000465780 ADAMTS4O75173 837 aa12.25□□□□□ -0.45
RBBP4-209ENST00000465780 EIF3JO75822 258 aaKnown RBP12.25□□□□□ -0.45
RBBP4-209ENST00000465780 SCG2P13521 617 aa12.25□□□□□ -0.45
RBBP4-209ENST00000465780 EIF2AK2P19525 551 aaKnown RBP12.25□□□□□ -0.45
RBBP4-209ENST00000465780 ADCYAP1R1P41586 468 aa12.25□□□□□ -0.45
RBBP4-209ENST00000465780 NEK4P51957 841 aa12.25□□□□□ -0.45
RBBP4-209ENST00000465780 NAPAP54920 295 aa12.25□□□□□ -0.45
RBBP4-209ENST00000465780 CCT2P78371 535 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms