RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 EIF1ADQ8N9N8 165 aaKnown RBP21.86■■□□□ 1.09
SDF4-205ENST00000465727 AK8Q96MA6 479 aa21.86■■□□□ 1.09
SDF4-205ENST00000465727 EDEM3Q9BZQ6 932 aa21.86■■□□□ 1.09
SDF4-205ENST00000465727 BAZ2AQ9UIF9 1905 aaKnown RBP21.85■■□□□ 1.09
SDF4-205ENST00000465727 SSU72P8A0A1W2PR75 194 aa21.85■■□□□ 1.09
SDF4-205ENST00000465727 KIF5BP33176 963 aa21.85■■□□□ 1.09
SDF4-205ENST00000465727 RDXP35241 583 aaKnown RBP21.85■■□□□ 1.09
SDF4-205ENST00000465727 NLRP14Q86W24 1093 aa21.85■■□□□ 1.09
SDF4-205ENST00000465727 MYCBPAPQ8TBZ2 947 aa21.85■■□□□ 1.09
SDF4-205ENST00000465727 RIOK1Q9BRS2 568 aaKnown RBP21.85■■□□□ 1.09
SDF4-205ENST00000465727 ORC4O43929 436 aa21.84■■□□□ 1.09
SDF4-205ENST00000465727 HEXIM1O94992 359 aaKnown RBP21.84■■□□□ 1.09
SDF4-205ENST00000465727 IL2RBP14784 551 aa21.84■■□□□ 1.09
SDF4-205ENST00000465727 BCAMP50895 628 aa21.84■■□□□ 1.09
SDF4-205ENST00000465727 GUCY1A3Q02108 690 aa21.84■■□□□ 1.09
SDF4-205ENST00000465727 VWA3BQ502W6 1294 aa21.84■■□□□ 1.09
SDF4-205ENST00000465727 KLHDC7AQ5VTJ3 777 aa21.84■■□□□ 1.09
SDF4-205ENST00000465727 CNNM4Q6P4Q7 775 aa21.84■■□□□ 1.09
SDF4-205ENST00000465727 TOM1L2Q6ZVM7 507 aa21.84■■□□□ 1.09
SDF4-205ENST00000465727 ADGRA1Q86SQ6 560 aa21.84■■□□□ 1.09
SDF4-205ENST00000465727 CCT8L2Q96SF2 557 aa21.84■■□□□ 1.09
SDF4-205ENST00000465727 C7orf25Q9BPX7 421 aa21.84■■□□□ 1.09
SDF4-205ENST00000465727 TRIM9Q9C026 710 aa21.84■■□□□ 1.09
SDF4-205ENST00000465727 ACTR5Q9H9F9 607 aaPredicted RBP21.84■■□□□ 1.09
SDF4-205ENST00000465727 DONSONQ9NYP3 566 aa21.84■■□□□ 1.09
SDF4-205ENST00000465727 NFU1Q9UMS0 254 aa21.84■■□□□ 1.09
SDF4-205ENST00000465727 GLI1P08151 1106 aa21.84■■□□□ 1.09
SDF4-205ENST00000465727 CARSP49589 748 aaKnown RBP21.84■■□□□ 1.09
SDF4-205ENST00000465727 CCDC194A0A1B0GVG4 234 aa21.83■■□□□ 1.09
SDF4-205ENST00000465727 C21orf2O43822 256 aa21.83■■□□□ 1.09
SDF4-205ENST00000465727 FGFR1OPO95684 399 aaKnown RBP21.83■■□□□ 1.09
SDF4-205ENST00000465727 AMPD3Q01432 767 aa21.83■■□□□ 1.09
SDF4-205ENST00000465727 GALNT17Q6IS24 598 aa21.83■■□□□ 1.09
SDF4-205ENST00000465727 PIK3R5Q8WYR1 880 aa21.83■■□□□ 1.09
SDF4-205ENST00000465727 JPH2Q9BR39 696 aaPredicted RBP21.83■■□□□ 1.09
SDF4-205ENST00000465727 NDST4Q9H3R1 872 aa21.83■■□□□ 1.09
SDF4-205ENST00000465727 EPB41L5Q9HCM4 733 aa21.83■■□□□ 1.09
SDF4-205ENST00000465727 LUC7LQ9NQ29 371 aaKnown RBP21.83■■□□□ 1.09
SDF4-205ENST00000465727 ERVV-1B6SEH8 477 aa21.83■■□□□ 1.08
SDF4-205ENST00000465727 RBAK-RBAKDNI3L0D1 243 aa21.83■■□□□ 1.08
SDF4-205ENST00000465727 M0R2N6 131 aa21.83■■□□□ 1.08
SDF4-205ENST00000465727 MRPS25P82663 173 aaKnown RBP21.83■■□□□ 1.08
SDF4-205ENST00000465727 ITGB3BPQ13352 177 aaPredicted RBP21.83■■□□□ 1.08
SDF4-205ENST00000465727 MAN2A1Q16706 1144 aa21.83■■□□□ 1.08
SDF4-205ENST00000465727 ASTE1Q2TB18 679 aaPredicted RBP21.83■■□□□ 1.08
SDF4-205ENST00000465727 CCDC40Q4G0X9 1142 aa21.83■■□□□ 1.08
SDF4-205ENST00000465727 LRIG3Q6UXM1 1119 aa21.83■■□□□ 1.08
SDF4-205ENST00000465727 PSMB7Q99436 277 aa21.83■■□□□ 1.08
SDF4-205ENST00000465727 KLC4Q9NSK0 619 aa21.83■■□□□ 1.08
SDF4-205ENST00000465727 TCP11L1Q9NUJ3 509 aa21.83■■□□□ 1.08
SDF4-205ENST00000465727 EHD2Q9NZN4 543 aa21.83■■□□□ 1.08
SDF4-205ENST00000465727 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.83■■□□□ 1.081e-6■■■■□ 25.3
SDF4-205ENST00000465727 FAM205AQ6ZU69 1335 aa21.82■■□□□ 1.08
SDF4-205ENST00000465727 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.82■■□□□ 1.08
SDF4-205ENST00000465727 BAZ2BQ9UIF8 2168 aaKnown RBP21.82■■□□□ 1.08
SDF4-205ENST00000465727 CICQ96RK0 1608 aaPredicted RBP21.82■■□□□ 1.08
SDF4-205ENST00000465727 GOLGA6L10A6NI86 522 aa21.82■■□□□ 1.08
SDF4-205ENST00000465727 PP2D1A8MPX8 630 aa21.82■■□□□ 1.08
SDF4-205ENST00000465727 RASSF9O75901 435 aa21.82■■□□□ 1.08
SDF4-205ENST00000465727 HOXA7P31268 230 aaPredicted RBP21.82■■□□□ 1.08
SDF4-205ENST00000465727 GUCY2DQ02846 1103 aa21.82■■□□□ 1.08
SDF4-205ENST00000465727 STK4Q13043 487 aa21.82■■□□□ 1.08
SDF4-205ENST00000465727 NEDD9Q14511 834 aa21.82■■□□□ 1.08
SDF4-205ENST00000465727 CCDC178Q5BJE1 867 aa21.82■■□□□ 1.08
SDF4-205ENST00000465727 CENPPQ6IPU0 288 aa21.82■■□□□ 1.08
SDF4-205ENST00000465727 C6orf89Q6UWU4 347 aa21.82■■□□□ 1.08
SDF4-205ENST00000465727 DAGLBQ8NCG7 672 aa21.82■■□□□ 1.08
SDF4-205ENST00000465727 SMARCAL1Q9NZC9 954 aa21.82■■□□□ 1.08
SDF4-205ENST00000465727 CEP83Q9Y592 693 aa21.82■■□□□ 1.08
SDF4-205ENST00000465727 CACNA1SQ13698 1873 aa21.82■■□□□ 1.08
SDF4-205ENST00000465727 GOLGA6L7A0A1B0GV03 622 aa21.81■■□□□ 1.08
SDF4-205ENST00000465727 TMCO5BA8MYB1 307 aa21.81■■□□□ 1.08
SDF4-205ENST00000465727 NCK2O43639 380 aa21.81■■□□□ 1.08
SDF4-205ENST00000465727 HSPA9P38646 679 aaKnown RBP21.81■■□□□ 1.08
SDF4-205ENST00000465727 CCDC13Q8IYE1 715 aa21.81■■□□□ 1.08
SDF4-205ENST00000465727 MTMR8Q96EF0 704 aa21.81■■□□□ 1.08
SDF4-205ENST00000465727 NUCKS1Q9H1E3 243 aaKnown RBP21.81■■□□□ 1.08
SDF4-205ENST00000465727 FLT1P17948 1338 aa21.81■■□□□ 1.08
SDF4-205ENST00000465727 A0A1B0GUL6 1792 aa21.81■■□□□ 1.08
SDF4-205ENST00000465727 LAMB1P07942 1786 aa21.81■■□□□ 1.08
SDF4-205ENST00000465727 LRRC53A6NM62 1247 aa21.81■■□□□ 1.08
SDF4-205ENST00000465727 FAM153BP0C7A2 387 aa21.81■■□□□ 1.08
SDF4-205ENST00000465727 ASIC1P78348 528 aa21.81■■□□□ 1.08
SDF4-205ENST00000465727 FAM153CQ494X1 144 aa21.81■■□□□ 1.08
SDF4-205ENST00000465727 RNF187Q5TA31 235 aaPredicted RBP21.81■■□□□ 1.08
SDF4-205ENST00000465727 CABP7Q86V35 215 aa21.81■■□□□ 1.08
SDF4-205ENST00000465727 CCDC50Q8IVM0 306 aa21.81■■□□□ 1.08
SDF4-205ENST00000465727 ZKSCAN4Q969J2 545 aaPredicted RBP21.81■■□□□ 1.08
SDF4-205ENST00000465727 TMEM60Q9H2L4 133 aa21.81■■□□□ 1.08
SDF4-205ENST00000465727 FAM207AQ9NSI2 230 aaPredicted RBP21.81■■□□□ 1.08
SDF4-205ENST00000465727 FAM153AQ9UHL3 310 aa21.81■■□□□ 1.08
SDF4-205ENST00000465727 SALL4Q9UJQ4 1053 aa21.81■■□□□ 1.08
SDF4-205ENST00000465727 DCCP43146 1447 aa21.8■■□□□ 1.08
SDF4-205ENST00000465727 SMIM22K7EJ46 135 aa21.8■■□□□ 1.08
SDF4-205ENST00000465727 SNAP23O00161 211 aa21.8■■□□□ 1.08
SDF4-205ENST00000465727 ADAMTS3O15072 1205 aa21.8■■□□□ 1.08
SDF4-205ENST00000465727 PLCG1P19174 1290 aa21.8■■□□□ 1.08
SDF4-205ENST00000465727 PSEN1P49768 467 aa21.8■■□□□ 1.08
SDF4-205ENST00000465727 CDR1P51861 262 aa21.8■■□□□ 1.08
SDF4-205ENST00000465727 PREPLQ4J6C6 727 aaPredicted RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms