RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 PPP1R9AQ9ULJ8 1098 aa16■□□□□ 0.15
HDAC6-215ENST00000465457 ARIH1Q9Y4X5 557 aaPredicted RBP16■□□□□ 0.15
HDAC6-215ENST00000465457 MTCH2Q9Y6C9 303 aa16■□□□□ 0.15
HDAC6-215ENST00000465457 TET1Q8NFU7 2136 aa16■□□□□ 0.15
HDAC6-215ENST00000465457 ASTN1O14525 1302 aa15.99■□□□□ 0.15
HDAC6-215ENST00000465457 DNAJC25-GNG10A0A024R161 153 aa15.99■□□□□ 0.15
HDAC6-215ENST00000465457 RBAK-RBAKDNI3L0D1 243 aa15.99■□□□□ 0.15
HDAC6-215ENST00000465457 TLL1O43897 1013 aa15.99■□□□□ 0.15
HDAC6-215ENST00000465457 F13A1P00488 732 aa15.99■□□□□ 0.15
HDAC6-215ENST00000465457 PDIA3P30101 505 aaKnown RBP15.99■□□□□ 0.15
HDAC6-215ENST00000465457 LIFRP42702 1097 aa15.99■□□□□ 0.15
HDAC6-215ENST00000465457 RCAN1P53805 252 aa15.99■□□□□ 0.15
HDAC6-215ENST00000465457 PPARAQ07869 468 aa15.99■□□□□ 0.15
HDAC6-215ENST00000465457 APOBRQ0VD83 1088 aa15.99■□□□□ 0.15
HDAC6-215ENST00000465457 SCRN1Q12765 414 aa15.99■□□□□ 0.15
HDAC6-215ENST00000465457 COL9A3Q14050 684 aaPredicted RBP15.99■□□□□ 0.15
HDAC6-215ENST00000465457 CCDC144BQ3MJ40 725 aa15.99■□□□□ 0.15
HDAC6-215ENST00000465457 FAM83BQ5T0W9 1011 aa15.99■□□□□ 0.15
HDAC6-215ENST00000465457 LARP1BQ659C4 914 aaKnown RBP15.99■□□□□ 0.15
HDAC6-215ENST00000465457 MCTP1Q6DN14 999 aa15.99■□□□□ 0.15
HDAC6-215ENST00000465457 TMTC2Q8N394 836 aa15.99■□□□□ 0.15
HDAC6-215ENST00000465457 NUP88Q99567 741 aaPredicted RBP15.99■□□□□ 0.15
HDAC6-215ENST00000465457 HIPK3Q9H422 1215 aa15.99■□□□□ 0.15
HDAC6-215ENST00000465457 ARHGEF10LQ9HCE6 1279 aa15.99■□□□□ 0.15
HDAC6-215ENST00000465457 DCP1AQ9NPI6 582 aaPredicted RBP15.99■□□□□ 0.15
HDAC6-215ENST00000465457 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.99■□□□□ 0.15
HDAC6-215ENST00000465457 GRIN2DO15399 1336 aa15.98■□□□□ 0.15
HDAC6-215ENST00000465457 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.98■□□□□ 0.15
HDAC6-215ENST00000465457 SH2B2O14492 632 aaPredicted RBP15.98■□□□□ 0.15
HDAC6-215ENST00000465457 PRKAB2O43741 272 aa15.98■□□□□ 0.15
HDAC6-215ENST00000465457 CDKL5O76039 1030 aa15.98■□□□□ 0.15
HDAC6-215ENST00000465457 MBD3O95983 291 aa15.98■□□□□ 0.15
HDAC6-215ENST00000465457 CA3P07451 260 aa15.98■□□□□ 0.15
HDAC6-215ENST00000465457 EEF2P13639 858 aaKnown RBP15.98■□□□□ 0.15
HDAC6-215ENST00000465457 GJA9P57773 515 aa15.98■□□□□ 0.15
HDAC6-215ENST00000465457 ANTXR2P58335 489 aa15.98■□□□□ 0.15
HDAC6-215ENST00000465457 STK3Q13188 491 aa15.98■□□□□ 0.15
HDAC6-215ENST00000465457 ACVR2BQ13705 512 aa15.98■□□□□ 0.15
HDAC6-215ENST00000465457 KLHL40Q2TBA0 621 aa15.98■□□□□ 0.15
HDAC6-215ENST00000465457 GNASQ5JWF2 1037 aa15.98■□□□□ 0.15
HDAC6-215ENST00000465457 CPLX2Q6PUV4 134 aaKnown RBP15.98■□□□□ 0.15
HDAC6-215ENST00000465457 CXCL17Q6UXB2 119 aa15.98■□□□□ 0.15
HDAC6-215ENST00000465457 MAMDC4Q6UXC1 1216 aa15.98■□□□□ 0.15
HDAC6-215ENST00000465457 FAM184AQ8NB25 1140 aa15.98■□□□□ 0.15
HDAC6-215ENST00000465457 ESR2Q92731 530 aa15.98■□□□□ 0.15
HDAC6-215ENST00000465457 SCLYQ96I15 445 aa15.98■□□□□ 0.15
HDAC6-215ENST00000465457 NOC4LQ9BVI4 516 aaKnown RBP15.98■□□□□ 0.15
HDAC6-215ENST00000465457 LRRC2Q9BYS8 371 aa15.98■□□□□ 0.15
HDAC6-215ENST00000465457 ISY1Q9ULR0 285 aaKnown RBP15.98■□□□□ 0.15
HDAC6-215ENST00000465457 MTMR6Q9Y217 621 aa15.98■□□□□ 0.15
HDAC6-215ENST00000465457 DDX49Q9Y6V7 483 aaKnown RBP15.98■□□□□ 0.15
HDAC6-215ENST00000465457 KLF18A0A0U1RQI7 1052 aa15.97■□□□□ 0.15
HDAC6-215ENST00000465457 ERICH2A1L162 156 aa15.97■□□□□ 0.15
HDAC6-215ENST00000465457 GOLGA8BA8MQT2 603 aa15.97■□□□□ 0.15
HDAC6-215ENST00000465457 TLR3O15455 904 aaKnown RBP15.97■□□□□ 0.15
HDAC6-215ENST00000465457 RAD21O60216 631 aa15.97■□□□□ 0.15
HDAC6-215ENST00000465457 TTLL4Q14679 1199 aa15.97■□□□□ 0.15
HDAC6-215ENST00000465457 AAK1Q2M2I8 961 aa15.97■□□□□ 0.15
HDAC6-215ENST00000465457 SBK1Q52WX2 424 aa15.97■□□□□ 0.15
HDAC6-215ENST00000465457 SNRNP48Q6IEG0 339 aaKnown RBP15.97■□□□□ 0.15
HDAC6-215ENST00000465457 SGMS1Q86VZ5 419 aa15.97■□□□□ 0.15
HDAC6-215ENST00000465457 AMOTL1Q8IY63 956 aa15.97■□□□□ 0.15
HDAC6-215ENST00000465457 TMEM87AQ8NBN3 555 aa15.97■□□□□ 0.15
HDAC6-215ENST00000465457 PCSK9Q8NBP7 692 aaKnown RBP15.97■□□□□ 0.15
HDAC6-215ENST00000465457 KATNBL1Q9H079 304 aa15.97■□□□□ 0.15
HDAC6-215ENST00000465457 TRPV6Q9H1D0 765 aa15.97■□□□□ 0.15
HDAC6-215ENST00000465457 PCDHA11Q9Y5I1 949 aa15.97■□□□□ 0.15
HDAC6-215ENST00000465457 NID2Q14112 1375 aa15.97■□□□□ 0.15
HDAC6-215ENST00000465457 NEDD4P46934 1319 aa15.96■□□□□ 0.15
HDAC6-215ENST00000465457 ZBBXA8MT70 800 aa15.96■□□□□ 0.15
HDAC6-215ENST00000465457 B4GALT4O60513 344 aa15.96■□□□□ 0.15
HDAC6-215ENST00000465457 MSL3Q8N5Y2 521 aaKnown RBP15.96■□□□□ 0.15
HDAC6-215ENST00000465457 NSUN7Q8NE18 718 aaKnown RBP15.96■□□□□ 0.15
HDAC6-215ENST00000465457 MTIF3Q9H2K0 278 aaKnown RBP15.96■□□□□ 0.15
HDAC6-215ENST00000465457 SLC4A7Q9Y6M7 1214 aa15.96■□□□□ 0.15
HDAC6-215ENST00000465457 PTPDC1A2A3K4 754 aa15.95■□□□□ 0.14
HDAC6-215ENST00000465457 VPS37CA5D8V6 355 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-215ENST00000465457 B4E1Z4 1266 aa15.95■□□□□ 0.14
HDAC6-215ENST00000465457 CPLX1O14810 134 aa15.95■□□□□ 0.14
HDAC6-215ENST00000465457 GPR37L1O60883 481 aa15.95■□□□□ 0.14
HDAC6-215ENST00000465457 FGRP09769 529 aa15.95■□□□□ 0.14
HDAC6-215ENST00000465457 ATP2A2P16615 1042 aaKnown RBP15.95■□□□□ 0.14
HDAC6-215ENST00000465457 NCLP19338 710 aaKnown RBP15.95■□□□□ 0.14
HDAC6-215ENST00000465457 PSMC6P62333 389 aa15.95■□□□□ 0.14
HDAC6-215ENST00000465457 PPP2R5BQ15173 497 aa15.95■□□□□ 0.14
HDAC6-215ENST00000465457 TMEM67Q5HYA8 995 aa15.95■□□□□ 0.14
HDAC6-215ENST00000465457 SYNE3Q6ZMZ3 975 aa15.95■□□□□ 0.14
HDAC6-215ENST00000465457 ARMCX2Q7L311 632 aa15.95■□□□□ 0.14
HDAC6-215ENST00000465457 SLC43A3Q8NBI5 491 aa15.95■□□□□ 0.14
HDAC6-215ENST00000465457 DDX11Q96FC9 970 aa15.95■□□□□ 0.14
HDAC6-215ENST00000465457 ZSCAN16Q9H4T2 348 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-215ENST00000465457 SH2D4AQ9H788 454 aa15.95■□□□□ 0.14
HDAC6-215ENST00000465457 LMBRD1Q9NUN5 540 aa15.95■□□□□ 0.14
HDAC6-215ENST00000465457 NAP1L2Q9ULW6 460 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-215ENST00000465457 IFIT3O14879 490 aaKnown RBP15.94■□□□□ 0.14
HDAC6-215ENST00000465457 ORC4O43929 436 aa15.94■□□□□ 0.14
HDAC6-215ENST00000465457 KDM4AO75164 1064 aa15.94■□□□□ 0.14
HDAC6-215ENST00000465457 CTDSPL2Q05D32 466 aa15.94■□□□□ 0.14
HDAC6-215ENST00000465457 TMEM63BQ5T3F8 832 aa15.94■□□□□ 0.14
HDAC6-215ENST00000465457 CHST3Q7LGC8 479 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms