RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 FOSL2P15408 326 aa24.36■■□□□ 1.49
CSPG5-204ENST00000465441 STAG2Q8N3U4 1231 aa24.36■■□□□ 1.49
CSPG5-204ENST00000465441 UBAC1Q9BSL1 405 aa24.36■■□□□ 1.49
CSPG5-204ENST00000465441 PBX4Q9BYU1 374 aa24.36■■□□□ 1.49
CSPG5-204ENST00000465441 WNT8AQ9H1J5 351 aa24.36■■□□□ 1.49
CSPG5-204ENST00000465441 TRMT13Q9NUP7 481 aaKnown RBP24.36■■□□□ 1.49
CSPG5-204ENST00000465441 COL20A1Q9P218 1284 aa24.36■■□□□ 1.49
CSPG5-204ENST00000465441 LAMA4Q16363 1823 aa24.35■■□□□ 1.49
CSPG5-204ENST00000465441 A6NJR5 290 aa24.35■■□□□ 1.49
CSPG5-204ENST00000465441 DHX16O60231 1041 aaKnown RBP24.35■■□□□ 1.49
CSPG5-204ENST00000465441 ARIH2O95376 493 aa24.35■■□□□ 1.49
CSPG5-204ENST00000465441 TTLL4Q14679 1199 aa24.35■■□□□ 1.49
CSPG5-204ENST00000465441 SEC23AQ15436 765 aa24.35■■□□□ 1.49
CSPG5-204ENST00000465441 BRDTQ58F21 947 aaPredicted RBP24.35■■□□□ 1.49
CSPG5-204ENST00000465441 IFIT1BQ5T764 474 aaKnown RBP24.35■■□□□ 1.49
CSPG5-204ENST00000465441 CYB5R4Q7L1T6 521 aa24.35■■□□□ 1.49
CSPG5-204ENST00000465441 FBXO11Q86XK2 927 aa24.35■■□□□ 1.49
CSPG5-204ENST00000465441 MCF2L2Q86YR7 1114 aa24.35■■□□□ 1.49
CSPG5-204ENST00000465441 CXXC1Q9P0U4 656 aaPredicted RBP24.35■■□□□ 1.49
CSPG5-204ENST00000465441 MRPL11Q9Y3B7 192 aaKnown RBP24.35■■□□□ 1.49
CSPG5-204ENST00000465441 SUPT20HL2P0C7V6 817 aa24.34■■□□□ 1.49
CSPG5-204ENST00000465441 CYP2C9P11712 490 aa24.34■■□□□ 1.49
CSPG5-204ENST00000465441 NBPF20Q3BBV1 942 aa24.34■■□□□ 1.49
CSPG5-204ENST00000465441 CCDC62Q6P9F0 684 aa24.34■■□□□ 1.49
CSPG5-204ENST00000465441 OTOP2Q7RTS6 562 aa24.34■■□□□ 1.49
CSPG5-204ENST00000465441 PPP1R13LQ8WUF5 828 aa24.34■■□□□ 1.49
CSPG5-204ENST00000465441 SCLYQ96I15 445 aa24.34■■□□□ 1.49
CSPG5-204ENST00000465441 KPNA6O60684 536 aa24.33■■□□□ 1.49
CSPG5-204ENST00000465441 SEPT14Q6ZU15 432 aa24.33■■□□□ 1.49
CSPG5-204ENST00000465441 RPUSD2Q8IZ73 545 aaKnown RBP24.33■■□□□ 1.49
CSPG5-204ENST00000465441 NSUN6Q8TEA1 469 aaKnown RBP24.33■■□□□ 1.49
CSPG5-204ENST00000465441 VWCEQ96DN2 955 aa24.33■■□□□ 1.49
CSPG5-204ENST00000465441 RAD50Q92878 1312 aa24.33■■□□□ 1.48
CSPG5-204ENST00000465441 PTH1RQ03431 593 aa24.32■■□□□ 1.48
CSPG5-204ENST00000465441 IWS1Q96ST2 819 aa24.32■■□□□ 1.48
CSPG5-204ENST00000465441 RMDN3Q96TC7 470 aa24.32■■□□□ 1.48
CSPG5-204ENST00000465441 COL25A1Q9BXS0 654 aaPredicted RBP24.32■■□□□ 1.48
CSPG5-204ENST00000465441 MTIF3Q9H2K0 278 aaKnown RBP24.32■■□□□ 1.48
CSPG5-204ENST00000465441 KLRF2D3W0D1 207 aa24.31■■□□□ 1.48
CSPG5-204ENST00000465441 CHMLP26374 656 aa24.31■■□□□ 1.48
CSPG5-204ENST00000465441 STXBP2Q15833 593 aa24.31■■□□□ 1.48
CSPG5-204ENST00000465441 LY6KQ17RY6 165 aa24.31■■□□□ 1.48
CSPG5-204ENST00000465441 FAM47CQ5HY64 1035 aa24.31■■□□□ 1.48
CSPG5-204ENST00000465441 AMNQ9BXJ7 453 aa24.31■■□□□ 1.48
CSPG5-204ENST00000465441 MAD2L2Q9UI95 211 aa24.31■■□□□ 1.48
CSPG5-204ENST00000465441 A0A0C4DFX4 3053 aa24.3■■□□□ 1.48
CSPG5-204ENST00000465441 PALM3A6NDB9 673 aaPredicted RBP24.3■■□□□ 1.48
CSPG5-204ENST00000465441 CFBP00751 764 aa24.3■■□□□ 1.48
CSPG5-204ENST00000465441 CYP21A2P08686 494 aa24.3■■□□□ 1.48
CSPG5-204ENST00000465441 IRX6P78412 446 aaPredicted RBP24.3■■□□□ 1.48
CSPG5-204ENST00000465441 TRDNQ13061 729 aa24.3■■□□□ 1.48
CSPG5-204ENST00000465441 ARHGEF16Q5VV41 709 aa24.3■■□□□ 1.48
CSPG5-204ENST00000465441 NFRKBQ6P4R8 1299 aa24.3■■□□□ 1.48
CSPG5-204ENST00000465441 RUFY2Q8WXA3 655 aa24.3■■□□□ 1.48
CSPG5-204ENST00000465441 MTMR8Q96EF0 704 aa24.3■■□□□ 1.48
CSPG5-204ENST00000465441 AFG1LQ8WV93 481 aa24.29■■□□□ 1.48
CSPG5-204ENST00000465441 MSRAQ9UJ68 235 aa24.29■■□□□ 1.48
CSPG5-204ENST00000465441 U3KPZ7 1027 aaPredicted RBP24.29■■□□□ 1.48
CSPG5-204ENST00000465441 OPLAHO14841 1288 aa24.28■■□□□ 1.48
CSPG5-204ENST00000465441 PPP1R11O60927 126 aaPredicted RBP24.28■■□□□ 1.48
CSPG5-204ENST00000465441 GH1P01241 217 aa24.28■■□□□ 1.48
CSPG5-204ENST00000465441 NR3C2P08235 984 aa24.28■■□□□ 1.48
CSPG5-204ENST00000465441 EIF2AK2P19525 551 aaKnown RBP24.28■■□□□ 1.48
CSPG5-204ENST00000465441 PTPN11Q06124 597 aaPredicted RBP24.28■■□□□ 1.48
CSPG5-204ENST00000465441 ARHGAP1Q07960 439 aa24.28■■□□□ 1.48
CSPG5-204ENST00000465441 RAB30Q15771 203 aa24.28■■□□□ 1.48
CSPG5-204ENST00000465441 DDX41Q9UJV9 622 aaKnown RBP24.28■■□□□ 1.48
CSPG5-204ENST00000465441 SCN10AQ9Y5Y9 1956 aa24.28■■□□□ 1.48
CSPG5-204ENST00000465441 EIF3JO75822 258 aaKnown RBP24.27■■□□□ 1.48
CSPG5-204ENST00000465441 CHMP4BP1P59074 171 aa24.27■■□□□ 1.48
CSPG5-204ENST00000465441 CHST3Q7LGC8 479 aa24.27■■□□□ 1.48
CSPG5-204ENST00000465441 DEFB128Q7Z7B8 93 aa24.27■■□□□ 1.48
CSPG5-204ENST00000465441 NKX2-4Q9H2Z4 354 aa24.27■■□□□ 1.48
CSPG5-204ENST00000465441 SENP2Q9HC62 589 aa24.27■■□□□ 1.48
CSPG5-204ENST00000465441 PXMP2Q9NR77 195 aa24.27■■□□□ 1.48
CSPG5-204ENST00000465441 TAF6LQ9Y6J9 622 aa24.27■■□□□ 1.48
CSPG5-204ENST00000465441 CDH23Q9H251 3354 aa24.27■■□□□ 1.48
CSPG5-204ENST00000465441 MYH6P13533 1939 aa24.26■■□□□ 1.47
CSPG5-204ENST00000465441 IFIT3O14879 490 aaKnown RBP24.26■■□□□ 1.47
CSPG5-204ENST00000465441 ZBTB5O15062 677 aa24.26■■□□□ 1.47
CSPG5-204ENST00000465441 MMP3P08254 477 aa24.26■■□□□ 1.47
CSPG5-204ENST00000465441 HSD17B4P51659 736 aa24.26■■□□□ 1.47
CSPG5-204ENST00000465441 SLC35G1Q2M3R5 365 aa24.26■■□□□ 1.47
CSPG5-204ENST00000465441 PRDM12Q9H4Q4 367 aa24.26■■□□□ 1.47
CSPG5-204ENST00000465441 YBX2Q9Y2T7 364 aaKnown RBP24.26■■□□□ 1.47
CSPG5-204ENST00000465441 PCDHA1Q9Y5I3 950 aa24.26■■□□□ 1.47
CSPG5-204ENST00000465441 SLC4A7Q9Y6M7 1214 aa24.26■■□□□ 1.47
CSPG5-204ENST00000465441 ZBBXA8MT70 800 aa24.25■■□□□ 1.47
CSPG5-204ENST00000465441 E7EWF7 191 aa24.25■■□□□ 1.47
CSPG5-204ENST00000465441 IQCF3P0C7M6 154 aa24.25■■□□□ 1.47
CSPG5-204ENST00000465441 RABGGTBP53611 331 aa24.25■■□□□ 1.47
CSPG5-204ENST00000465441 GHRHRQ02643 423 aa24.25■■□□□ 1.47
CSPG5-204ENST00000465441 GRM4Q14833 912 aa24.25■■□□□ 1.47
CSPG5-204ENST00000465441 RETREG2Q8NC44 543 aa24.25■■□□□ 1.47
CSPG5-204ENST00000465441 KAT2BQ92831 832 aa24.25■■□□□ 1.47
CSPG5-204ENST00000465441 RIOX1Q9H6W3 641 aa24.25■■□□□ 1.47
CSPG5-204ENST00000465441 MAP3K20Q9NYL2 800 aaKnown RBP24.25■■□□□ 1.47
CSPG5-204ENST00000465441 UNC80Q8N2C7 3258 aa24.24■■□□□ 1.47
CSPG5-204ENST00000465441 SGSM2O43147 1006 aa24.24■■□□□ 1.47
CSPG5-204ENST00000465441 PFKMP08237 780 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms