RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.96□□□□□ -0.18
CLCNKA-204ENST00000464764 TCP1P17987 556 aaKnown RBP13.95□□□□□ -0.18
CLCNKA-204ENST00000464764 KLRK1P26718 216 aa13.95□□□□□ -0.18
CLCNKA-204ENST00000464764 HPDP32754 393 aaPredicted RBP13.95□□□□□ -0.18
CLCNKA-204ENST00000464764 LRRC41Q15345 812 aa13.95□□□□□ -0.18
CLCNKA-204ENST00000464764 LETM2Q2VYF4 491 aa13.95□□□□□ -0.18
CLCNKA-204ENST00000464764 VWA3BQ502W6 1294 aa13.95□□□□□ -0.18
CLCNKA-204ENST00000464764 NAA35Q5VZE5 725 aa13.95□□□□□ -0.18
CLCNKA-204ENST00000464764 DNAAF5Q86Y56 855 aa13.95□□□□□ -0.18
CLCNKA-204ENST00000464764 CEP89Q96ST8 783 aa13.95□□□□□ -0.18
CLCNKA-204ENST00000464764 CARD10Q9BWT7 1032 aa13.95□□□□□ -0.18
CLCNKA-204ENST00000464764 FLT1P17948 1338 aa13.95□□□□□ -0.18
CLCNKA-204ENST00000464764 HDLBPQ00341 1268 aaKnown RBP13.95□□□□□ -0.18
CLCNKA-204ENST00000464764 ZNF572Q7Z3I7 529 aaPredicted RBP13.95□□□□□ -0.18
CLCNKA-204ENST00000464764 OR2W6PQ8NHA6 318 aa13.95□□□□□ -0.18
CLCNKA-204ENST00000464764 ALS2CR12Q96Q35 445 aa13.95□□□□□ -0.18
CLCNKA-204ENST00000464764 DCP1AQ9NPI6 582 aaPredicted RBP13.95□□□□□ -0.18
CLCNKA-204ENST00000464764 COL1A1P02452 1464 aaPredicted RBP13.95□□□□□ -0.18
CLCNKA-204ENST00000464764 M0R2N6 131 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 CYTH3O43739 400 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 FGRP09769 529 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 ARID5AQ03989 594 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 NOC3LQ8WTT2 800 aaKnown RBP13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 CASKIN2Q8WXE0 1202 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 CAVIN3Q969G5 261 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 DYNLL2Q96FJ2 89 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 BRIP1Q9BX63 1249 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 CCSER1Q9C0I3 900 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 IL17RBQ9NRM6 502 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 BICDL2A1A5D9 508 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 USP17L3A6NCW0 530 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 USP17L4A6NCW7 530 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 MEFVO15553 781 aaPredicted RBP13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 CCNT1O60563 726 aaKnown RBP13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 USP17L8P0C7I0 530 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 PRLRP16471 622 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 CALML3P27482 149 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 CDK17Q00537 523 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 IFT88Q13099 833 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 TDRD12Q587J7 1177 aaKnown RBP13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 USP17L1Q7RTZ2 530 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 CNPY4Q8N129 248 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 PRPF38AQ8NAV1 312 aaKnown RBP13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 A0A1W2PQJ5 194 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 PALMO75781 387 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 KIAA0754O94854 1291 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 TFAP4Q01664 338 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 C3orf67Q6ZVT6 689 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 POTEDQ86YR6 584 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 BAP1Q92560 729 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 GOLPH3Q9H4A6 298 aa13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 PPANQ9NQ55 473 aaKnown RBP13.94□□□□□ -0.18
CLCNKA-204ENST00000464764 BCORQ6W2J9 1755 aa13.93□□□□□ -0.18
CLCNKA-204ENST00000464764 CCDC152Q4G0S7 254 aa13.93□□□□□ -0.18
CLCNKA-204ENST00000464764 KLHL7Q8IXQ5 586 aa13.93□□□□□ -0.18
CLCNKA-204ENST00000464764 ZNF473Q8WTR7 871 aaKnown RBP13.93□□□□□ -0.18
CLCNKA-204ENST00000464764 CCT8L2Q96SF2 557 aa13.93□□□□□ -0.18
CLCNKA-204ENST00000464764 TANGO6Q9C0B7 1094 aa13.93□□□□□ -0.18
CLCNKA-204ENST00000464764 NR1D1P20393 614 aa13.93□□□□□ -0.18
CLCNKA-204ENST00000464764 HNRNPH3P31942 346 aaKnown RBP13.93□□□□□ -0.18
CLCNKA-204ENST00000464764 ITIH3Q06033 890 aa13.93□□□□□ -0.18
CLCNKA-204ENST00000464764 EHHADHQ08426 723 aa13.93□□□□□ -0.18
CLCNKA-204ENST00000464764 CCDC91Q7Z6B0 441 aa13.93□□□□□ -0.18
CLCNKA-204ENST00000464764 IFT20Q8IY31 132 aa13.93□□□□□ -0.18
CLCNKA-204ENST00000464764 PNMA1Q8ND90 353 aa13.93□□□□□ -0.18
CLCNKA-204ENST00000464764 MMTAG2Q9BU76 263 aaKnown RBP13.93□□□□□ -0.18
CLCNKA-204ENST00000464764 EPN3Q9H201 632 aa13.93□□□□□ -0.18
CLCNKA-204ENST00000464764 TCP11L1Q9NUJ3 509 aa13.93□□□□□ -0.18
CLCNKA-204ENST00000464764 DUOX1Q9NRD9 1551 aa13.93□□□□□ -0.18
CLCNKA-204ENST00000464764 MECOMQ03112 1051 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 CFAP221Q4G0U5 840 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 FIGNQ5HY92 759 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 B4GALNT4Q76KP1 1039 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 MAATS1Q7Z4T9 603 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 DDX42Q86XP3 938 aaKnown RBP eCLIP13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 FAM114A1Q8IWE2 563 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 NOX5Q96PH1 765 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 PACSIN1Q9BY11 444 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 GDF3Q9NR23 364 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 COL4A1P02462 1669 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 PRDX5P30044 214 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 PTGISQ16647 500 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 SPRED3Q2MJR0 410 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 ASTE1Q2TB18 679 aaPredicted RBP13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 CEP85LQ5SZL2 805 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 HGSNATQ68CP4 663 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 CACNA2D4Q7Z3S7 1137 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 UIMC1Q96RL1 719 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 DOCK2Q92608 1830 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 MYMKA6NI61 221 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 E7EVH7 732 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 TLR2O60603 784 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 PPP1R37O75864 691 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 KLRC1P26715 233 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 MAP2K2P36507 400 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 GSCP56915 257 aaPredicted RBP13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 SF3A3Q12874 501 aaKnown RBP eCLIP13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 KDM7AQ6ZMT4 941 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 NLRP14Q86W24 1093 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 FAM84BQ96KN1 310 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms