RNA–Protein interactions for RNA: ENST00000463479.1

PLOD3-210, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-210ENST00000463479 PTPDC1A2A3K4 754 aa15.15■□□□□ 0.02
PLOD3-210ENST00000463479 RANBP6O60518 1105 aaKnown RBP15.15■□□□□ 0.02
PLOD3-210ENST00000463479 ARHGEF15O94989 841 aa15.15■□□□□ 0.02
PLOD3-210ENST00000463479 AAK1Q2M2I8 961 aa15.15■□□□□ 0.02
PLOD3-210ENST00000463479 NBPF20Q3BBV1 942 aa15.15■□□□□ 0.02
PLOD3-210ENST00000463479 MCMDC2Q4G0Z9 681 aa15.15■□□□□ 0.02
PLOD3-210ENST00000463479 FAM47CQ5HY64 1035 aa15.15■□□□□ 0.02
PLOD3-210ENST00000463479 SYDE2Q5VT97 1194 aa15.15■□□□□ 0.02
PLOD3-210ENST00000463479 KRT40Q6A162 431 aa15.15■□□□□ 0.02
PLOD3-210ENST00000463479 BTNL9Q6UXG8 535 aa15.15■□□□□ 0.02
PLOD3-210ENST00000463479 GPHNQ9NQX3 736 aaPredicted RBP15.15■□□□□ 0.02
PLOD3-210ENST00000463479 NCOR1O75376 2440 aa15.15■□□□□ 0.02
PLOD3-210ENST00000463479 FRMPD2Q68DX3 1309 aaPredicted RBP15.15■□□□□ 0.02
PLOD3-210ENST00000463479 PRRC2BQ5JSZ5 2229 aaKnown RBP15.15■□□□□ 0.02
PLOD3-210ENST00000463479 TANC1Q9C0D5 1861 aa15.14■□□□□ 0.01
PLOD3-210ENST00000463479 LOC102724159A0A0B4J2E5 919 aa15.14■□□□□ 0.01
PLOD3-210ENST00000463479 GTPBP6O43824 516 aaPredicted RBP15.14■□□□□ 0.01
PLOD3-210ENST00000463479 ACTN1P12814 892 aa15.14■□□□□ 0.01
PLOD3-210ENST00000463479 POU3F3P20264 500 aaPredicted RBP15.14■□□□□ 0.01
PLOD3-210ENST00000463479 CHMLP26374 656 aa15.14■□□□□ 0.01
PLOD3-210ENST00000463479 CALML3P27482 149 aa15.14■□□□□ 0.01
PLOD3-210ENST00000463479 PLA2G5P39877 138 aa15.14■□□□□ 0.01
PLOD3-210ENST00000463479 PWP2Q15269 919 aaKnown RBP15.14■□□□□ 0.01
PLOD3-210ENST00000463479 VPS53Q5VIR6 699 aa15.14■□□□□ 0.01
PLOD3-210ENST00000463479 CLEC4DQ8WXI8 215 aa15.14■□□□□ 0.01
PLOD3-210ENST00000463479 FAM227BQ96M60 508 aa15.14■□□□□ 0.01
PLOD3-210ENST00000463479 SLC9A7Q96T83 725 aa15.14■□□□□ 0.01
PLOD3-210ENST00000463479 GPCPD1Q9NPB8 672 aa15.14■□□□□ 0.01
PLOD3-210ENST00000463479 ANAPC4Q9UJX5 808 aa15.14■□□□□ 0.01
PLOD3-210ENST00000463479 REV3LO60673 3130 aa15.13■□□□□ 0.01
PLOD3-210ENST00000463479 ORC4O43929 436 aa15.13■□□□□ 0.01
PLOD3-210ENST00000463479 IQCF3P0C7M6 154 aa15.13■□□□□ 0.01
PLOD3-210ENST00000463479 RFC2P35250 354 aa15.13■□□□□ 0.01
PLOD3-210ENST00000463479 TAP1Q03518 808 aa15.13■□□□□ 0.01
PLOD3-210ENST00000463479 PPP2R5BQ15173 497 aa15.13■□□□□ 0.01
PLOD3-210ENST00000463479 ARNTL2Q8WYA1 636 aa15.13■□□□□ 0.01
PLOD3-210ENST00000463479 COPS5Q92905 334 aa15.13■□□□□ 0.01
PLOD3-210ENST00000463479 RAD50Q92878 1312 aa15.13■□□□□ 0.01
PLOD3-210ENST00000463479 A0A0D9SFI3 127 aa15.12■□□□□ 0.01
PLOD3-210ENST00000463479 PITPNM1O00562 1244 aa15.12■□□□□ 0.01
PLOD3-210ENST00000463479 NKRFO15226 690 aaKnown RBP eCLIP15.12■□□□□ 0.01
PLOD3-210ENST00000463479 FGRP09769 529 aa15.12■□□□□ 0.01
PLOD3-210ENST00000463479 EDNRBP24530 442 aa15.12■□□□□ 0.01
PLOD3-210ENST00000463479 PDE4DQ08499 809 aa15.12■□□□□ 0.01
PLOD3-210ENST00000463479 BRDTQ58F21 947 aaPredicted RBP15.12■□□□□ 0.01
PLOD3-210ENST00000463479 NFRKBQ6P4R8 1299 aa15.12■□□□□ 0.01
PLOD3-210ENST00000463479 RNF207Q6ZRF8 634 aa15.12■□□□□ 0.01
PLOD3-210ENST00000463479 HERC6Q8IVU3 1022 aa15.12■□□□□ 0.01
PLOD3-210ENST00000463479 RETREG2Q8NC44 543 aa15.12■□□□□ 0.01
PLOD3-210ENST00000463479 PHOSPHO2Q8TCD6 241 aa15.12■□□□□ 0.01
PLOD3-210ENST00000463479 TMEM47Q9BQJ4 181 aa15.12■□□□□ 0.01
PLOD3-210ENST00000463479 C1QTNF1Q9BXJ1 281 aa15.12■□□□□ 0.01
PLOD3-210ENST00000463479 FTOQ9C0B1 505 aaKnown RBP eCLIP15.12■□□□□ 0.01
PLOD3-210ENST00000463479 TOMM22Q9NS69 142 aa15.12■□□□□ 0.01
PLOD3-210ENST00000463479 BDP1A6H8Y1 2624 aa15.12■□□□□ 0.01
PLOD3-210ENST00000463479 A6NJR5 290 aa15.11■□□□□ 0.01
PLOD3-210ENST00000463479 EIF5BO60841 1220 aaKnown RBP15.11■□□□□ 0.01
PLOD3-210ENST00000463479 PDHBP11177 359 aa15.11■□□□□ 0.01
PLOD3-210ENST00000463479 TOP1P11387 765 aaKnown RBP15.11■□□□□ 0.01
PLOD3-210ENST00000463479 RPS6P62753 249 aaKnown RBP15.11■□□□□ 0.01
PLOD3-210ENST00000463479 RRP12Q5JTH9 1297 aaKnown RBP15.11■□□□□ 0.01
PLOD3-210ENST00000463479 SPRED2Q7Z698 418 aa15.11■□□□□ 0.01
PLOD3-210ENST00000463479 SCFD2Q8WU76 684 aa15.11■□□□□ 0.01
PLOD3-210ENST00000463479 FAM122AQ96E09 287 aa15.11■□□□□ 0.01
PLOD3-210ENST00000463479 TET1Q8NFU7 2136 aa15.11■□□□□ 0.01
PLOD3-210ENST00000463479 CCDC171Q6TFL3 1326 aa15.11■□□□□ 0.01
PLOD3-210ENST00000463479 COL4A4P53420 1690 aaPredicted RBP15.1■□□□□ 0.01
PLOD3-210ENST00000463479 PTPRSQ13332 1948 aa15.1■□□□□ 0.01
PLOD3-210ENST00000463479 KPNA6O60684 536 aa15.1■□□□□ 0.01
PLOD3-210ENST00000463479 ARIH2O95376 493 aa15.1■□□□□ 0.01
PLOD3-210ENST00000463479 TXNP10599 105 aaKnown RBP15.1■□□□□ 0.01
PLOD3-210ENST00000463479 CHMP4BP1P59074 171 aa15.1■□□□□ 0.01
PLOD3-210ENST00000463479 PTPN11Q06124 597 aaPredicted RBP15.1■□□□□ 0.01
PLOD3-210ENST00000463479 GRB10Q13322 594 aa15.1■□□□□ 0.01
PLOD3-210ENST00000463479 BFSP2Q13515 415 aa15.1■□□□□ 0.01
PLOD3-210ENST00000463479 DNERQ8NFT8 737 aa15.1■□□□□ 0.01
PLOD3-210ENST00000463479 COG5Q9UP83 839 aa15.1■□□□□ 0.01
PLOD3-210ENST00000463479 NOD1Q9Y239 953 aa15.1■□□□□ 0.01
PLOD3-210ENST00000463479 KIF28PB7ZC32 967 aa15.09■□□□□ 0.01
PLOD3-210ENST00000463479 TLL1O43897 1013 aa15.09■□□□□ 0.01
PLOD3-210ENST00000463479 BAIAP3O94812 1187 aa15.09■□□□□ 0.01
PLOD3-210ENST00000463479 ZNF543Q08ER8 600 aa15.09■□□□□ 0.01
PLOD3-210ENST00000463479 ALX1Q15699 326 aa15.09■□□□□ 0.01
PLOD3-210ENST00000463479 PPP4R3CPQ6ZMV5 832 aa15.09■□□□□ 0.01
PLOD3-210ENST00000463479 CTAGE1Q96RT6 745 aa15.09■□□□□ 0.01
PLOD3-210ENST00000463479 MPHOSPH6Q99547 160 aaKnown RBP15.09■□□□□ 0.01
PLOD3-210ENST00000463479 ESYT1Q9BSJ8 1104 aa15.09■□□□□ 0.01
PLOD3-210ENST00000463479 EPHX3Q9H6B9 360 aa15.09■□□□□ 0.01
PLOD3-210ENST00000463479 TCP11L1Q9NUJ3 509 aa15.09■□□□□ 0.01
PLOD3-210ENST00000463479 WDR19Q8NEZ3 1342 aa15.09■□□□□ 0.01
PLOD3-210ENST00000463479 TRANK1O15050 2925 aa15.08■□□□□ 0
PLOD3-210ENST00000463479 LCHNA4D1U4 455 aa15.08■□□□□ 0
PLOD3-210ENST00000463479 SGSM2O43147 1006 aa15.08■□□□□ 0
PLOD3-210ENST00000463479 LPXNO60711 386 aa15.08■□□□□ 0
PLOD3-210ENST00000463479 FGAP02671 866 aa15.08■□□□□ 0
PLOD3-210ENST00000463479 GPNMBQ14956 572 aa15.08■□□□□ 0
PLOD3-210ENST00000463479 PTGISQ16647 500 aa15.08■□□□□ 0
PLOD3-210ENST00000463479 GDF6Q6KF10 455 aaPredicted RBP15.08■□□□□ 0
PLOD3-210ENST00000463479 TMCO2Q7Z6W1 182 aaPredicted RBP15.08■□□□□ 0
PLOD3-210ENST00000463479 HLA-CQ95604 372 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms