RNA–Protein interactions for RNA: ENST00000463216.5

TTC3-212, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-212ENST00000463216 MTIF3Q9H2K0 278 aaKnown RBP28.12■■■□□ 2.09
TTC3-212ENST00000463216 SUPT16HQ9Y5B9 1047 aaKnown RBP28.12■■■□□ 2.09
TTC3-212ENST00000463216 ABCB11O95342 1321 aa28.12■■■□□ 2.09
TTC3-212ENST00000463216 NKRFO15226 690 aaKnown RBP eCLIP28.11■■■□□ 2.096e-8■■■□□ 18.1
TTC3-212ENST00000463216 CYP2C9P11712 490 aa28.11■■■□□ 2.09
TTC3-212ENST00000463216 EDNRBP24530 442 aa28.11■■■□□ 2.09
TTC3-212ENST00000463216 CNNM2Q9H8M5 875 aa28.11■■■□□ 2.09
TTC3-212ENST00000463216 CXXC1Q9P0U4 656 aaPredicted RBP28.11■■■□□ 2.09
TTC3-212ENST00000463216 QRICH1Q2TAL8 776 aa28.1■■■□□ 2.09
TTC3-212ENST00000463216 IFIT1BQ5T764 474 aaKnown RBP28.1■■■□□ 2.09
TTC3-212ENST00000463216 RASIP1Q5U651 963 aa28.1■■■□□ 2.09
TTC3-212ENST00000463216 HERVK_113Q902F9 699 aa28.1■■■□□ 2.09
TTC3-212ENST00000463216 ANKS1AQ92625 1134 aa28.1■■■□□ 2.09
TTC3-212ENST00000463216 COL25A1Q9BXS0 654 aaPredicted RBP28.1■■■□□ 2.09
TTC3-212ENST00000463216 WNT8AQ9H1J5 351 aa28.1■■■□□ 2.09
TTC3-212ENST00000463216 IL25Q9H293 177 aa28.1■■■□□ 2.09
TTC3-212ENST00000463216 SUPT20HL2P0C7V6 817 aa28.09■■■□□ 2.09
TTC3-212ENST00000463216 TTLL4Q14679 1199 aa28.09■■■□□ 2.09
TTC3-212ENST00000463216 SEPT14Q6ZU15 432 aa28.09■■■□□ 2.09
TTC3-212ENST00000463216 FBXO11Q86XK2 927 aa28.09■■■□□ 2.09
TTC3-212ENST00000463216 RGS22Q8NE09 1264 aa28.09■■■□□ 2.09
TTC3-212ENST00000463216 TAAR1Q96RJ0 339 aa28.09■■■□□ 2.09
TTC3-212ENST00000463216 MSRAQ9UJ68 235 aa28.09■■■□□ 2.09
TTC3-212ENST00000463216 NBPF20Q3BBV1 942 aa28.08■■■□□ 2.09
TTC3-212ENST00000463216 MCF2L2Q86YR7 1114 aa28.08■■■□□ 2.09
TTC3-212ENST00000463216 RPUSD2Q8IZ73 545 aaKnown RBP28.08■■■□□ 2.09
TTC3-212ENST00000463216 ZBBXA8MT70 800 aa28.07■■■□□ 2.08
TTC3-212ENST00000463216 ARIH2O95376 493 aa28.07■■■□□ 2.08
TTC3-212ENST00000463216 PDE4AP27815 886 aa28.07■■■□□ 2.08
TTC3-212ENST00000463216 SYTL5Q8TDW5 730 aaPredicted RBP28.07■■■□□ 2.08
TTC3-212ENST00000463216 JMJD4Q9H9V9 463 aa28.07■■■□□ 2.08
TTC3-212ENST00000463216 MRPL11Q9Y3B7 192 aaKnown RBP28.07■■■□□ 2.08
TTC3-212ENST00000463216 PRUNE2Q8WUY3 3088 aa28.06■■■□□ 2.08
TTC3-212ENST00000463216 GSPT1P15170 499 aaKnown RBP28.06■■■□□ 2.08
TTC3-212ENST00000463216 TTC22Q5TAA0 569 aa28.06■■■□□ 2.08
TTC3-212ENST00000463216 CHST3Q7LGC8 479 aa28.06■■■□□ 2.08
TTC3-212ENST00000463216 DEFB128Q7Z7B8 93 aa28.06■■■□□ 2.08
TTC3-212ENST00000463216 STAG2Q8N3U4 1231 aa28.06■■■□□ 2.08
TTC3-212ENST00000463216 NSUN6Q8TEA1 469 aaKnown RBP28.06■■■□□ 2.08
TTC3-212ENST00000463216 RMDN3Q96TC7 470 aa28.06■■■□□ 2.08
TTC3-212ENST00000463216 COL20A1Q9P218 1284 aa28.06■■■□□ 2.08
TTC3-212ENST00000463216 MYO9BQ13459 2157 aa28.06■■■□□ 2.08
TTC3-212ENST00000463216 KPNA6O60684 536 aa28.05■■■□□ 2.08
TTC3-212ENST00000463216 CFBP00751 764 aa28.05■■■□□ 2.08
TTC3-212ENST00000463216 EIF2AK2P19525 551 aaKnown RBP28.05■■■□□ 2.08
TTC3-212ENST00000463216 IRX6P78412 446 aaPredicted RBP28.05■■■□□ 2.08
TTC3-212ENST00000463216 TRDNQ13061 729 aa28.05■■■□□ 2.08
TTC3-212ENST00000463216 RAB30Q15771 203 aa28.05■■■□□ 2.08
TTC3-212ENST00000463216 LY6KQ17RY6 165 aa28.05■■■□□ 2.08
TTC3-212ENST00000463216 ARHGEF16Q5VV41 709 aa28.05■■■□□ 2.08
TTC3-212ENST00000463216 PPM1EQ8WY54 764 aa28.05■■■□□ 2.08
TTC3-212ENST00000463216 GAS2L1Q99501 681 aaPredicted RBP28.05■■■□□ 2.08
TTC3-212ENST00000463216 NKX2-4Q9H2Z4 354 aa28.05■■■□□ 2.08
TTC3-212ENST00000463216 PRDM12Q9H4Q4 367 aa28.05■■■□□ 2.08
TTC3-212ENST00000463216 NOD1Q9Y239 953 aa28.05■■■□□ 2.08
TTC3-212ENST00000463216 CUL9Q8IWT3 2517 aa28.05■■■□□ 2.08
TTC3-212ENST00000463216 GBF1Q92538 1859 aa28.04■■■□□ 2.08
TTC3-212ENST00000463216 A6NJR5 290 aa28.04■■■□□ 2.08
TTC3-212ENST00000463216 STXBP2Q15833 593 aa28.04■■■□□ 2.08
TTC3-212ENST00000463216 CYB5R4Q7L1T6 521 aa28.04■■■□□ 2.08
TTC3-212ENST00000463216 SLC4A7Q9Y6M7 1214 aa28.04■■■□□ 2.08
TTC3-212ENST00000463216 SCN10AQ9Y5Y9 1956 aa28.03■■■□□ 2.08
TTC3-212ENST00000463216 KLRF2D3W0D1 207 aa28.03■■■□□ 2.08
TTC3-212ENST00000463216 AFG1LQ8WV93 481 aa28.03■■■□□ 2.08
TTC3-212ENST00000463216 GH1P01241 217 aa28.02■■■□□ 2.08
TTC3-212ENST00000463216 RABGGTBP53611 331 aa28.02■■■□□ 2.08
TTC3-212ENST00000463216 NFRKBQ6P4R8 1299 aa28.02■■■□□ 2.08
TTC3-212ENST00000463216 RUFY2Q8WXA3 655 aa28.02■■■□□ 2.08
TTC3-212ENST00000463216 AMNQ9BXJ7 453 aa28.02■■■□□ 2.08
TTC3-212ENST00000463216 SLC28A3Q9HAS3 691 aa28.02■■■□□ 2.08
TTC3-212ENST00000463216 SCN5AQ14524 2016 aa28.02■■■□□ 2.08
TTC3-212ENST00000463216 SEC23AQ15436 765 aa28.01■■■□□ 2.07
TTC3-212ENST00000463216 RETREG2Q8NC44 543 aa28.01■■■□□ 2.07
TTC3-212ENST00000463216 IWS1Q96ST2 819 aa28.01■■■□□ 2.07
TTC3-212ENST00000463216 MAF1Q9H063 256 aa28.01■■■□□ 2.07
TTC3-212ENST00000463216 KIAA1217Q5T5P2 1943 aa28■■■□□ 2.07
TTC3-212ENST00000463216 CCDC62Q6P9F0 684 aa28■■■□□ 2.07
TTC3-212ENST00000463216 HOMER1Q86YM7 354 aa28■■■□□ 2.07
TTC3-212ENST00000463216 USP38Q8NB14 1042 aa28■■■□□ 2.07
TTC3-212ENST00000463216 MAD2L2Q9UI95 211 aa28■■■□□ 2.07
TTC3-212ENST00000463216 YBX2Q9Y2T7 364 aaKnown RBP28■■■□□ 2.07
TTC3-212ENST00000463216 U3KPZ7 1027 aaPredicted RBP28■■■□□ 2.07
TTC3-212ENST00000463216 IFIT3O14879 490 aaKnown RBP27.99■■■□□ 2.07
TTC3-212ENST00000463216 MMP3P08254 477 aa27.99■■■□□ 2.07
TTC3-212ENST00000463216 IGFBP4P22692 258 aa27.99■■■□□ 2.07
TTC3-212ENST00000463216 PTH1RQ03431 593 aa27.99■■■□□ 2.07
TTC3-212ENST00000463216 PXMP2Q9NR77 195 aa27.99■■■□□ 2.07
TTC3-212ENST00000463216 PCDHA1Q9Y5I3 950 aa27.99■■■□□ 2.07
TTC3-212ENST00000463216 ERICH2A1L162 156 aa27.98■■■□□ 2.07
TTC3-212ENST00000463216 CYP21A2P08686 494 aa27.98■■■□□ 2.07
TTC3-212ENST00000463216 MYCLP12524 364 aaPredicted RBP27.98■■■□□ 2.07
TTC3-212ENST00000463216 PTPN11Q06124 597 aaPredicted RBP27.98■■■□□ 2.07
TTC3-212ENST00000463216 RALYLQ86SE5 291 aaKnown RBP27.98■■■□□ 2.07
TTC3-212ENST00000463216 FTOQ9C0B1 505 aaKnown RBP eCLIP27.98■■■□□ 2.07
TTC3-212ENST00000463216 MRVI1Q9Y6F6 885 aa27.98■■■□□ 2.07
TTC3-212ENST00000463216 ZBTB5O15062 677 aa27.97■■■□□ 2.07
TTC3-212ENST00000463216 EIF3JO75822 258 aaKnown RBP27.97■■■□□ 2.07
TTC3-212ENST00000463216 NR3C2P08235 984 aa27.97■■■□□ 2.07
TTC3-212ENST00000463216 PFKMP08237 780 aa27.97■■■□□ 2.07
TTC3-212ENST00000463216 ACTN1P12814 892 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms