RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 MAF1Q9H063 256 aa23.21■■□□□ 1.31
VARS-221ENST00000463184 MUC3AQ02505 3323 aa23.21■■□□□ 1.31
VARS-221ENST00000463184 GBF1Q92538 1859 aa23.2■■□□□ 1.3
VARS-221ENST00000463184 TRIM6-TRIM34B2RNG4 842 aa23.2■■□□□ 1.3
VARS-221ENST00000463184 TXNP10599 105 aaKnown RBP23.2■■□□□ 1.3
VARS-221ENST00000463184 ACTN1P12814 892 aa23.2■■□□□ 1.3
VARS-221ENST00000463184 MYOGP15173 224 aa23.2■■□□□ 1.3
VARS-221ENST00000463184 NT5C2P49902 561 aa23.2■■□□□ 1.3
VARS-221ENST00000463184 MFAP1P55081 439 aaKnown RBP23.2■■□□□ 1.3
VARS-221ENST00000463184 AAMPQ13685 434 aa23.2■■□□□ 1.3
VARS-221ENST00000463184 DEFB128Q7Z7B8 93 aa23.2■■□□□ 1.3
VARS-221ENST00000463184 DGKHQ86XP1 1220 aa23.2■■□□□ 1.3
VARS-221ENST00000463184 ESR2Q92731 530 aa23.2■■□□□ 1.3
VARS-221ENST00000463184 CHD7Q9P2D1 2997 aa23.19■■□□□ 1.3
VARS-221ENST00000463184 PITPNM1O00562 1244 aa23.19■■□□□ 1.3
VARS-221ENST00000463184 TMEM67Q5HYA8 995 aa23.19■■□□□ 1.3
VARS-221ENST00000463184 TBC1D10CQ8IV04 446 aa23.19■■□□□ 1.3
VARS-221ENST00000463184 RETREG2Q8NC44 543 aa23.19■■□□□ 1.3
VARS-221ENST00000463184 COPS5Q92905 334 aa23.19■■□□□ 1.3
VARS-221ENST00000463184 TSPYL2Q9H2G4 693 aaPredicted RBP23.19■■□□□ 1.3
VARS-221ENST00000463184 SCN10AQ9Y5Y9 1956 aa23.19■■□□□ 1.3
VARS-221ENST00000463184 CCDC178Q5BJE1 867 aa23.18■■□□□ 1.3
VARS-221ENST00000463184 RILPL2Q969X0 211 aa23.18■■□□□ 1.3
VARS-221ENST00000463184 IQCF3P0C7M6 154 aa23.17■■□□□ 1.3
VARS-221ENST00000463184 GOLGA8HP0CJ92 632 aa23.17■■□□□ 1.3
VARS-221ENST00000463184 BFSP2Q13515 415 aa23.17■■□□□ 1.3
VARS-221ENST00000463184 USH1GQ495M9 461 aa23.17■■□□□ 1.3
VARS-221ENST00000463184 PHOSPHO2Q8TCD6 241 aa23.17■■□□□ 1.3
VARS-221ENST00000463184 SLC9A7Q96T83 725 aa23.17■■□□□ 1.3
VARS-221ENST00000463184 ZNF213O14771 459 aa23.16■■□□□ 1.3
VARS-221ENST00000463184 IQCA1Q86XH1 822 aa23.16■■□□□ 1.3
VARS-221ENST00000463184 IL27Q8NEV9 243 aa23.16■■□□□ 1.3
VARS-221ENST00000463184 ZKSCAN3Q9BRR0 538 aa23.16■■□□□ 1.3
VARS-221ENST00000463184 LNPKQ9C0E8 428 aa23.16■■□□□ 1.3
VARS-221ENST00000463184 UBA5Q9GZZ9 404 aa23.16■■□□□ 1.3
VARS-221ENST00000463184 NEDD4P46934 1319 aa23.15■■□□□ 1.3
VARS-221ENST00000463184 ARIH2O95376 493 aa23.15■■□□□ 1.3
VARS-221ENST00000463184 SDSP20132 328 aa23.15■■□□□ 1.3
VARS-221ENST00000463184 CCDC62Q6P9F0 684 aa23.15■■□□□ 1.3
VARS-221ENST00000463184 EXOC6Q8TAG9 804 aa23.15■■□□□ 1.3
VARS-221ENST00000463184 ADAMTS19Q8TE59 1207 aa23.15■■□□□ 1.3
VARS-221ENST00000463184 NOD1Q9Y239 953 aa23.15■■□□□ 1.3
VARS-221ENST00000463184 ABCB11O95342 1321 aa23.14■■□□□ 1.3
VARS-221ENST00000463184 CA3P07451 260 aa23.14■■□□□ 1.29
VARS-221ENST00000463184 POU3F3P20264 500 aaPredicted RBP23.14■■□□□ 1.29
VARS-221ENST00000463184 CDC37Q16543 378 aaPredicted RBP23.14■■□□□ 1.29
VARS-221ENST00000463184 MCF2L2Q86YR7 1114 aa23.14■■□□□ 1.29
VARS-221ENST00000463184 PNMA1Q8ND90 353 aa23.14■■□□□ 1.29
VARS-221ENST00000463184 NSUN6Q8TEA1 469 aaKnown RBP23.14■■□□□ 1.29
VARS-221ENST00000463184 ANKS1AQ92625 1134 aa23.14■■□□□ 1.29
VARS-221ENST00000463184 FTOQ9C0B1 505 aaKnown RBP eCLIP23.14■■□□□ 1.29
VARS-221ENST00000463184 CPVLQ9H3G5 476 aa23.14■■□□□ 1.29
VARS-221ENST00000463184 KIF28PB7ZC32 967 aa23.13■■□□□ 1.29
VARS-221ENST00000463184 MICALL1Q8N3F8 863 aa23.13■■□□□ 1.29
VARS-221ENST00000463184 CAGE1Q8TC20 777 aa23.13■■□□□ 1.29
VARS-221ENST00000463184 SYTL5Q8TDW5 730 aaPredicted RBP23.13■■□□□ 1.29
VARS-221ENST00000463184 PPP1R13LQ8WUF5 828 aa23.13■■□□□ 1.29
VARS-221ENST00000463184 TAAR1Q96RJ0 339 aa23.13■■□□□ 1.29
VARS-221ENST00000463184 IWS1Q96ST2 819 aa23.13■■□□□ 1.29
VARS-221ENST00000463184 UHRF1Q96T88 793 aaPredicted RBP23.13■■□□□ 1.29
VARS-221ENST00000463184 KAT14Q9H8E8 782 aa23.13■■□□□ 1.29
VARS-221ENST00000463184 SCN5AQ14524 2016 aa23.13■■□□□ 1.29
VARS-221ENST00000463184 GTPBP6O43824 516 aaPredicted RBP23.12■■□□□ 1.29
VARS-221ENST00000463184 KDM4AO75164 1064 aa23.12■■□□□ 1.29
VARS-221ENST00000463184 BAIAP3O94812 1187 aa23.12■■□□□ 1.29
VARS-221ENST00000463184 GH1P01241 217 aa23.12■■□□□ 1.29
VARS-221ENST00000463184 STXBP2Q15833 593 aa23.12■■□□□ 1.29
VARS-221ENST00000463184 PTGISQ16647 500 aa23.12■■□□□ 1.29
VARS-221ENST00000463184 ASPRV1Q53RT3 343 aa23.12■■□□□ 1.29
VARS-221ENST00000463184 SEPT14Q6ZU15 432 aa23.12■■□□□ 1.29
VARS-221ENST00000463184 SESTD1Q86VW0 696 aa23.12■■□□□ 1.29
VARS-221ENST00000463184 ADGRF4Q8IZF3 695 aa23.12■■□□□ 1.29
VARS-221ENST00000463184 CCDC155Q8N6L0 562 aa23.12■■□□□ 1.29
VARS-221ENST00000463184 AFG1LQ8WV93 481 aa23.12■■□□□ 1.29
VARS-221ENST00000463184 TBC1D5Q92609 795 aa23.12■■□□□ 1.29
VARS-221ENST00000463184 MMP3P08254 477 aa23.11■■□□□ 1.29
VARS-221ENST00000463184 CASTP20810 708 aaKnown RBP23.11■■□□□ 1.29
VARS-221ENST00000463184 CHMP4BP1P59074 171 aa23.11■■□□□ 1.29
VARS-221ENST00000463184 IRX6P78412 446 aaPredicted RBP23.11■■□□□ 1.29
VARS-221ENST00000463184 LY6KQ17RY6 165 aa23.11■■□□□ 1.29
VARS-221ENST00000463184 AAK1Q2M2I8 961 aa23.11■■□□□ 1.29
VARS-221ENST00000463184 SMC5Q8IY18 1101 aa23.11■■□□□ 1.29
VARS-221ENST00000463184 ZSCAN10Q96SZ4 725 aaPredicted RBP23.11■■□□□ 1.29
VARS-221ENST00000463184 OSBPL3Q9H4L5 887 aa23.11■■□□□ 1.29
VARS-221ENST00000463184 MRPL11Q9Y3B7 192 aaKnown RBP23.11■■□□□ 1.29
VARS-221ENST00000463184 ARHGAP1Q07960 439 aa23.1■■□□□ 1.29
VARS-221ENST00000463184 HERC6Q8IVU3 1022 aa23.1■■□□□ 1.29
VARS-221ENST00000463184 AFAP1L1Q8TED9 768 aa23.1■■□□□ 1.29
VARS-221ENST00000463184 RMDN3Q96TC7 470 aa23.1■■□□□ 1.29
VARS-221ENST00000463184 RWDD1Q9H446 243 aaPredicted RBP23.1■■□□□ 1.29
VARS-221ENST00000463184 COL20A1Q9P218 1284 aa23.1■■□□□ 1.29
VARS-221ENST00000463184 MTCH2Q9Y6C9 303 aa23.1■■□□□ 1.29
VARS-221ENST00000463184 RFXAPO00287 272 aa23.09■■□□□ 1.29
VARS-221ENST00000463184 PARNO95453 639 aaKnown RBP23.09■■□□□ 1.29
VARS-221ENST00000463184 PARP1P09874 1014 aaKnown RBP23.09■■□□□ 1.29
VARS-221ENST00000463184 QRICH1Q2TAL8 776 aa23.09■■□□□ 1.29
VARS-221ENST00000463184 CWC27Q6UX04 472 aaKnown RBP23.09■■□□□ 1.29
VARS-221ENST00000463184 FBXO11Q86XK2 927 aa23.09■■□□□ 1.29
VARS-221ENST00000463184 PLEKHM2Q8IWE5 1019 aa23.09■■□□□ 1.29
VARS-221ENST00000463184 CERS4Q9HA82 394 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms