RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 CPT1AP50416 773 aa18.5■□□□□ 0.55
SND1-203ENST00000463020 RPS6P62753 249 aaKnown RBP18.5■□□□□ 0.55
SND1-203ENST00000463020 GRB10Q13322 594 aa18.5■□□□□ 0.55
SND1-203ENST00000463020 DHX38Q92620 1227 aaKnown RBP18.5■□□□□ 0.55
SND1-203ENST00000463020 FAM227BQ96M60 508 aa18.5■□□□□ 0.55
SND1-203ENST00000463020 ADD3Q9UEY8 706 aaKnown RBP18.5■□□□□ 0.55
SND1-203ENST00000463020 A0A0D9SFI3 127 aa18.49■□□□□ 0.55
SND1-203ENST00000463020 A6NJR5 290 aa18.49■□□□□ 0.55
SND1-203ENST00000463020 TLL1O43897 1013 aa18.49■□□□□ 0.55
SND1-203ENST00000463020 MX1P20591 662 aa18.49■□□□□ 0.55
SND1-203ENST00000463020 CHMP4BP1P59074 171 aa18.49■□□□□ 0.55
SND1-203ENST00000463020 PPP2R5BQ15173 497 aa18.49■□□□□ 0.55
SND1-203ENST00000463020 RRP12Q5JTH9 1297 aaKnown RBP18.49■□□□□ 0.55
SND1-203ENST00000463020 RNF207Q6ZRF8 634 aa18.49■□□□□ 0.55
SND1-203ENST00000463020 TBC1D5Q92609 795 aa18.49■□□□□ 0.55
SND1-203ENST00000463020 PITPNM1O00562 1244 aa18.48■□□□□ 0.55
SND1-203ENST00000463020 TOP1P11387 765 aaKnown RBP18.48■□□□□ 0.55
SND1-203ENST00000463020 DEFB103AP81534 67 aa18.48■□□□□ 0.55
SND1-203ENST00000463020 PDE4DQ08499 809 aa18.48■□□□□ 0.55
SND1-203ENST00000463020 NFRKBQ6P4R8 1299 aa18.48■□□□□ 0.55
SND1-203ENST00000463020 ZNF589Q86UQ0 364 aaPredicted RBP18.48■□□□□ 0.55
SND1-203ENST00000463020 SLC9A7Q96T83 725 aa18.48■□□□□ 0.55
SND1-203ENST00000463020 FTOQ9C0B1 505 aaKnown RBP eCLIP18.48■□□□□ 0.55
SND1-203ENST00000463020 COL20A1Q9P218 1284 aa18.48■□□□□ 0.55
SND1-203ENST00000463020 FGAP02671 866 aa18.47■□□□□ 0.55
SND1-203ENST00000463020 GOLGA8HP0CJ92 632 aa18.47■□□□□ 0.55
SND1-203ENST00000463020 TXNP10599 105 aaKnown RBP18.47■□□□□ 0.55
SND1-203ENST00000463020 HAND2P61296 217 aa18.47■□□□□ 0.55
SND1-203ENST00000463020 ZNF543Q08ER8 600 aa18.47■□□□□ 0.55
SND1-203ENST00000463020 LRRFIP1Q32MZ4 808 aaKnown RBP18.47■□□□□ 0.55
SND1-203ENST00000463020 PPP4R3BQ5MIZ7 849 aa18.47■□□□□ 0.55
SND1-203ENST00000463020 GDF6Q6KF10 455 aaPredicted RBP18.47■□□□□ 0.55
SND1-203ENST00000463020 TBC1D10CQ8IV04 446 aa18.47■□□□□ 0.55
SND1-203ENST00000463020 GDPD5Q8WTR4 605 aa18.47■□□□□ 0.55
SND1-203ENST00000463020 KAT2BQ92831 832 aa18.47■□□□□ 0.55
SND1-203ENST00000463020 TSPYL2Q9H2G4 693 aaPredicted RBP18.47■□□□□ 0.55
SND1-203ENST00000463020 CD320Q9NPF0 282 aa18.47■□□□□ 0.55
SND1-203ENST00000463020 C11orf16Q9NQ32 467 aa18.47■□□□□ 0.55
SND1-203ENST00000463020 GPHNQ9NQX3 736 aaPredicted RBP18.47■□□□□ 0.55
SND1-203ENST00000463020 TOMM22Q9NS69 142 aa18.47■□□□□ 0.55
SND1-203ENST00000463020 SNHG28P0DPA3 235 aa18.46■□□□□ 0.55
SND1-203ENST00000463020 RFC2P35250 354 aa18.46■□□□□ 0.55
SND1-203ENST00000463020 WDR5P61964 334 aaKnown RBP18.46■□□□□ 0.55
SND1-203ENST00000463020 ALX1Q15699 326 aa18.46■□□□□ 0.55
SND1-203ENST00000463020 USH1GQ495M9 461 aa18.46■□□□□ 0.55
SND1-203ENST00000463020 CCDC62Q6P9F0 684 aa18.46■□□□□ 0.55
SND1-203ENST00000463020 SCFD2Q8WU76 684 aa18.46■□□□□ 0.55
SND1-203ENST00000463020 AFG1LQ8WV93 481 aa18.46■□□□□ 0.55
SND1-203ENST00000463020 WNT8BQ93098 351 aa18.46■□□□□ 0.55
SND1-203ENST00000463020 LRFN3Q9BTN0 628 aa18.46■□□□□ 0.55
SND1-203ENST00000463020 BRWD1Q9NSI6 2320 aa18.45■□□□□ 0.54
SND1-203ENST00000463020 GTPBP6O43824 516 aaPredicted RBP18.45■□□□□ 0.54
SND1-203ENST00000463020 ACTN1P12814 892 aa18.45■□□□□ 0.54
SND1-203ENST00000463020 ARHGAP1Q07960 439 aa18.45■□□□□ 0.54
SND1-203ENST00000463020 PTGISQ16647 500 aa18.45■□□□□ 0.54
SND1-203ENST00000463020 LY6KQ17RY6 165 aa18.45■□□□□ 0.54
SND1-203ENST00000463020 PHOSPHO2Q8TCD6 241 aa18.45■□□□□ 0.54
SND1-203ENST00000463020 FAM122AQ96E09 287 aa18.45■□□□□ 0.54
SND1-203ENST00000463020 UBA5Q9GZZ9 404 aa18.45■□□□□ 0.54
SND1-203ENST00000463020 TCP11L1Q9NUJ3 509 aa18.45■□□□□ 0.54
SND1-203ENST00000463020 LOC102724159A0A0B4J2E5 919 aa18.44■□□□□ 0.54
SND1-203ENST00000463020 FAM86C2PA6NEL3 165 aa18.44■□□□□ 0.54
SND1-203ENST00000463020 NBNO60934 754 aa18.44■□□□□ 0.54
SND1-203ENST00000463020 MMP3P08254 477 aa18.44■□□□□ 0.54
SND1-203ENST00000463020 HIC1Q14526 733 aa18.44■□□□□ 0.54
SND1-203ENST00000463020 PWP2Q15269 919 aaKnown RBP18.44■□□□□ 0.54
SND1-203ENST00000463020 TRAF7Q6Q0C0 670 aa18.44■□□□□ 0.54
SND1-203ENST00000463020 RETREG2Q8NC44 543 aa18.44■□□□□ 0.54
SND1-203ENST00000463020 TAAR1Q96RJ0 339 aa18.44■□□□□ 0.54
SND1-203ENST00000463020 ZKSCAN3Q9BRR0 538 aa18.44■□□□□ 0.54
SND1-203ENST00000463020 TRIP12Q14669 1992 aaPredicted RBP18.44■□□□□ 0.54
SND1-203ENST00000463020 NEDD4P46934 1319 aa18.44■□□□□ 0.54
SND1-203ENST00000463020 WDR19Q8NEZ3 1342 aa18.44■□□□□ 0.54
SND1-203ENST00000463020 NKRFO15226 690 aaKnown RBP eCLIP18.43■□□□□ 0.54
SND1-203ENST00000463020 HSPD1P10809 573 aaKnown RBP18.43■□□□□ 0.54
SND1-203ENST00000463020 PTPN11Q06124 597 aaPredicted RBP18.43■□□□□ 0.54
SND1-203ENST00000463020 CHST3Q7LGC8 479 aa18.43■□□□□ 0.54
SND1-203ENST00000463020 DNERQ8NFT8 737 aa18.43■□□□□ 0.54
SND1-203ENST00000463020 C1QTNF1Q9BXJ1 281 aa18.43■□□□□ 0.54
SND1-203ENST00000463020 MTUS1Q9ULD2 1270 aa18.43■□□□□ 0.54
SND1-203ENST00000463020 ZNF200P98182 395 aaPredicted RBP18.42■□□□□ 0.54
SND1-203ENST00000463020 NMIQ13287 307 aaPredicted RBP18.42■□□□□ 0.54
SND1-203ENST00000463020 BFSP2Q13515 415 aa18.42■□□□□ 0.54
SND1-203ENST00000463020 MBTPS1Q14703 1052 aa18.42■□□□□ 0.54
SND1-203ENST00000463020 AAK1Q2M2I8 961 aa18.42■□□□□ 0.54
SND1-203ENST00000463020 SEPT14Q6ZU15 432 aa18.42■□□□□ 0.54
SND1-203ENST00000463020 SYTL5Q8TDW5 730 aaPredicted RBP18.42■□□□□ 0.54
SND1-203ENST00000463020 HLA-CQ95604 372 aa18.42■□□□□ 0.54
SND1-203ENST00000463020 HELLSQ9NRZ9 838 aa18.42■□□□□ 0.54
SND1-203ENST00000463020 COG5Q9UP83 839 aa18.42■□□□□ 0.54
SND1-203ENST00000463020 NOD1Q9Y239 953 aa18.42■□□□□ 0.54
SND1-203ENST00000463020 RAD50Q92878 1312 aa18.42■□□□□ 0.54
SND1-203ENST00000463020 KPNA6O60684 536 aa18.41■□□□□ 0.54
SND1-203ENST00000463020 BAIAP3O94812 1187 aa18.41■□□□□ 0.54
SND1-203ENST00000463020 TRIM71Q2Q1W2 868 aaKnown RBP18.41■□□□□ 0.54
SND1-203ENST00000463020 ERICH6BQ5W0A0 696 aa18.41■□□□□ 0.54
SND1-203ENST00000463020 LRRC8DQ7L1W4 858 aa18.41■□□□□ 0.54
SND1-203ENST00000463020 EVI5LQ96CN4 794 aa18.41■□□□□ 0.54
SND1-203ENST00000463020 CXCL10P02778 98 aa18.4■□□□□ 0.54
SND1-203ENST00000463020 ZNF286BP0CG31 522 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms