RNA–Protein interactions for RNA: ENST00000462438.1

RAE1-207, Transcript of ribonucleic acid export 1, humanhuman

TSL 2

Gene RAE1, Length 3,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-207ENST00000462438 CHAMP1Q96JM3 812 aa13.74□□□□□ -0.21
RAE1-207ENST00000462438 POLR3EQ9NVU0 708 aa13.74□□□□□ -0.21
RAE1-207ENST00000462438 RSPH14Q9UHP6 348 aa13.74□□□□□ -0.21
RAE1-207ENST00000462438 ELP1O95163 1332 aa13.73□□□□□ -0.21
RAE1-207ENST00000462438 BCRP11274 1271 aa13.73□□□□□ -0.21
RAE1-207ENST00000462438 PSEN1P49768 467 aa13.73□□□□□ -0.21
RAE1-207ENST00000462438 MYSM1Q5VVJ2 828 aa13.73□□□□□ -0.21
RAE1-207ENST00000462438 MBOAT7Q96N66 472 aa13.73□□□□□ -0.21
RAE1-207ENST00000462438 BTBD7Q9P203 1132 aa13.73□□□□□ -0.21
RAE1-207ENST00000462438 ISY1Q9ULR0 285 aaKnown RBP13.73□□□□□ -0.21
RAE1-207ENST00000462438 KCNJ14Q9UNX9 436 aa13.73□□□□□ -0.21
RAE1-207ENST00000462438 MYH7BA7E2Y1 1941 aa13.73□□□□□ -0.21
RAE1-207ENST00000462438 hCG_1642624A0A1W2PR95 340 aa13.73□□□□□ -0.21
RAE1-207ENST00000462438 KIF28PB7ZC32 967 aa13.73□□□□□ -0.21
RAE1-207ENST00000462438 GCOM1H8Y6P7 765 aaPredicted RBP13.73□□□□□ -0.21
RAE1-207ENST00000462438 POLR2MP0CAP2 368 aa13.73□□□□□ -0.21
RAE1-207ENST00000462438 MYRIPQ8NFW9 859 aa13.73□□□□□ -0.21
RAE1-207ENST00000462438 SMCHD1A6NHR9 2005 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 CYP3A7-CYP3A51PA0A087WV96 503 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 CYP3A7P24462 503 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 USP11P51784 963 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 ERVK-9P63128 1117 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 ERVK-24P63145 666 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 CAPNS2Q96L46 248 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 SAGE1Q9NXZ1 904 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 CFAP45Q9UL16 551 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 BTBD18B2RXH4 712 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 IGF2BP3O00425 579 aaKnown RBP eCLIP13.72□□□□□ -0.21
RAE1-207ENST00000462438 CLGNO14967 610 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 YEATS4O95619 227 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 GCFC2P16383 781 aaKnown RBP13.72□□□□□ -0.21
RAE1-207ENST00000462438 SREBF1P36956 1147 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 IRF5Q13568 498 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 NAA30Q147X3 362 aaPredicted RBP13.72□□□□□ -0.21
RAE1-207ENST00000462438 SNRNP48Q6IEG0 339 aaKnown RBP13.72□□□□□ -0.21
RAE1-207ENST00000462438 CCDC174Q6PII3 467 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 GPRC5AQ8NFJ5 357 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 AGBL1Q96MI9 1066 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 RAVER2Q9HCJ3 691 aaKnown RBP13.72□□□□□ -0.21
RAE1-207ENST00000462438 ST7Q9NRC1 585 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 RNF146Q9NTX7 359 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 RTEL1Q9NZ71 1219 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 CA12O43570 354 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 ZNF500O60304 480 aaPredicted RBP13.72□□□□□ -0.21
RAE1-207ENST00000462438 CIITAP33076 1130 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 NONOQ15233 471 aaKnown RBP eCLIP13.72□□□□□ -0.21
RAE1-207ENST00000462438 GBP4Q96PP9 640 aa13.72□□□□□ -0.21
RAE1-207ENST00000462438 LAD1O00515 517 aa13.71□□□□□ -0.21
RAE1-207ENST00000462438 PPP4R3AQ6IN85 833 aa13.71□□□□□ -0.21
RAE1-207ENST00000462438 C17orf99Q6UX52 265 aa13.71□□□□□ -0.21
RAE1-207ENST00000462438 NIPA1Q7RTP0 329 aa13.71□□□□□ -0.21
RAE1-207ENST00000462438 DNERQ8NFT8 737 aa13.71□□□□□ -0.21
RAE1-207ENST00000462438 ZFYVE28Q9HCC9 887 aa13.71□□□□□ -0.21
RAE1-207ENST00000462438 PLXNA1Q9UIW2 1896 aa13.71□□□□□ -0.21
RAE1-207ENST00000462438 CASP8AP2Q9UKL3 1982 aa13.71□□□□□ -0.21
RAE1-207ENST00000462438 OXER1Q8TDS5 423 aa13.71□□□□□ -0.22
RAE1-207ENST00000462438 MOV10L1Q9BXT6 1211 aaKnown RBP13.71□□□□□ -0.22
RAE1-207ENST00000462438 SCAND2PQ9GZW5 306 aaPredicted RBP13.71□□□□□ -0.22
RAE1-207ENST00000462438 STRNO43815 780 aa13.7□□□□□ -0.22
RAE1-207ENST00000462438 TLR2O60603 784 aa13.7□□□□□ -0.22
RAE1-207ENST00000462438 STAM2O75886 525 aa13.7□□□□□ -0.22
RAE1-207ENST00000462438 MAPK4P31152 587 aa13.7□□□□□ -0.22
RAE1-207ENST00000462438 TTC12Q9H892 705 aaPredicted RBP13.7□□□□□ -0.22
RAE1-207ENST00000462438 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.7□□□□□ -0.22
RAE1-207ENST00000462438 GJB4Q9NTQ9 266 aa13.7□□□□□ -0.22
RAE1-207ENST00000462438 CEP131Q9UPN4 1083 aa13.7□□□□□ -0.22
RAE1-207ENST00000462438 CCDC194A0A1B0GVG4 234 aa13.7□□□□□ -0.22
RAE1-207ENST00000462438 CCDC66A2RUB6 948 aa13.7□□□□□ -0.22
RAE1-207ENST00000462438 KRT85P78386 507 aa13.7□□□□□ -0.22
RAE1-207ENST00000462438 FAM212AQ96EL1 285 aa13.7□□□□□ -0.22
RAE1-207ENST00000462438 ZNFX1Q9P2E3 1918 aaKnown RBP13.7□□□□□ -0.22
RAE1-207ENST00000462438 DIS3Q9Y2L1 958 aaKnown RBP13.7□□□□□ -0.22
RAE1-207ENST00000462438 TCHHQ07283 1943 aa13.7□□□□□ -0.22
RAE1-207ENST00000462438 GTF2A1P52655 376 aaPredicted RBP13.7□□□□□ -0.22
RAE1-207ENST00000462438 ZNF467Q7Z7K2 595 aaPredicted RBP13.7□□□□□ -0.22
RAE1-207ENST00000462438 MORC4Q8TE76 937 aa13.7□□□□□ -0.22
RAE1-207ENST00000462438 RCOR1Q9UKL0 485 aa13.7□□□□□ -0.22
RAE1-207ENST00000462438 DNAJC25-GNG10A0A024R161 153 aa13.69□□□□□ -0.22
RAE1-207ENST00000462438 GNL2Q13823 731 aaKnown RBP13.69□□□□□ -0.22
RAE1-207ENST00000462438 USH1GQ495M9 461 aa13.69□□□□□ -0.22
RAE1-207ENST00000462438 IWS1Q96ST2 819 aa13.69□□□□□ -0.22
RAE1-207ENST00000462438 ANO3Q9BYT9 981 aa13.69□□□□□ -0.22
RAE1-207ENST00000462438 PPP6R2O75170 966 aa13.69□□□□□ -0.22
RAE1-207ENST00000462438 BAG4O95429 457 aaKnown RBP13.69□□□□□ -0.22
RAE1-207ENST00000462438 ALAS1P13196 640 aa13.69□□□□□ -0.22
RAE1-207ENST00000462438 GUCY1B3Q02153 619 aa13.69□□□□□ -0.22
RAE1-207ENST00000462438 NR5A1Q13285 461 aa13.69□□□□□ -0.22
RAE1-207ENST00000462438 MCTP1Q6DN14 999 aa13.69□□□□□ -0.22
RAE1-207ENST00000462438 MSL3Q8N5Y2 521 aaKnown RBP13.69□□□□□ -0.22
RAE1-207ENST00000462438 SYTL5Q8TDW5 730 aaPredicted RBP13.69□□□□□ -0.22
RAE1-207ENST00000462438 SMCR8Q8TEV9 937 aaPredicted RBP13.69□□□□□ -0.22
RAE1-207ENST00000462438 TXNRD2Q9NNW7 524 aa13.69□□□□□ -0.22
RAE1-207ENST00000462438 CYP39A1Q9NYL5 469 aa13.69□□□□□ -0.22
RAE1-207ENST00000462438 PPFIA3O75145 1194 aa13.68□□□□□ -0.22
RAE1-207ENST00000462438 PRPHP41219 470 aa13.68□□□□□ -0.22
RAE1-207ENST00000462438 TOB1P50616 345 aaPredicted RBP13.68□□□□□ -0.22
RAE1-207ENST00000462438 SNAP25P60880 206 aa13.68□□□□□ -0.22
RAE1-207ENST00000462438 MUM1L1Q5H9M0 696 aa13.68□□□□□ -0.22
RAE1-207ENST00000462438 CYP4F22Q6NT55 531 aa13.68□□□□□ -0.22
RAE1-207ENST00000462438 NEK8Q86SG6 692 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms