RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 GNA11P29992 359 aa13.53□□□□□ -0.24
CPNE1-221ENST00000462352 CACNB2Q08289 660 aaPredicted RBP13.53□□□□□ -0.24
CPNE1-221ENST00000462352 PWP2Q15269 919 aaKnown RBP13.53□□□□□ -0.24
CPNE1-221ENST00000462352 ARHGEF16Q5VV41 709 aa13.53□□□□□ -0.24
CPNE1-221ENST00000462352 ARMCX2Q7L311 632 aa13.53□□□□□ -0.24
CPNE1-221ENST00000462352 FAM184AQ8NB25 1140 aa13.53□□□□□ -0.24
CPNE1-221ENST00000462352 MORC4Q8TE76 937 aa13.53□□□□□ -0.24
CPNE1-221ENST00000462352 NSUN6Q8TEA1 469 aaKnown RBP13.53□□□□□ -0.24
CPNE1-221ENST00000462352 ARMC5Q96C12 935 aa13.53□□□□□ -0.24
CPNE1-221ENST00000462352 PHF20Q9BVI0 1012 aa13.53□□□□□ -0.24
CPNE1-221ENST00000462352 PXMP2Q9NR77 195 aa13.53□□□□□ -0.24
CPNE1-221ENST00000462352 KCNJ14Q9UNX9 436 aa13.53□□□□□ -0.24
CPNE1-221ENST00000462352 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.53□□□□□ -0.24
CPNE1-221ENST00000462352 SPDYE3A6NKU9 549 aa13.52□□□□□ -0.25
CPNE1-221ENST00000462352 SNAI1O95863 264 aaPredicted RBP13.52□□□□□ -0.25
CPNE1-221ENST00000462352 PRKAR2AP13861 404 aaKnown RBP13.52□□□□□ -0.25
CPNE1-221ENST00000462352 EDNRBP24530 442 aa13.52□□□□□ -0.25
CPNE1-221ENST00000462352 GJB2P29033 226 aa13.52□□□□□ -0.25
CPNE1-221ENST00000462352 CLK2P49760 499 aaKnown RBP13.52□□□□□ -0.25
CPNE1-221ENST00000462352 UBXN2AP68543 259 aa13.52□□□□□ -0.25
CPNE1-221ENST00000462352 NPY5RQ15761 445 aa13.52□□□□□ -0.25
CPNE1-221ENST00000462352 MAP3K21Q5TCX8 1036 aa13.52□□□□□ -0.25
CPNE1-221ENST00000462352 BICD2Q8TD16 824 aa13.52□□□□□ -0.25
CPNE1-221ENST00000462352 ZNF333Q96JL9 665 aa13.52□□□□□ -0.25
CPNE1-221ENST00000462352 IWS1Q96ST2 819 aa13.52□□□□□ -0.25
CPNE1-221ENST00000462352 MPHOSPH6Q99547 160 aaKnown RBP13.52□□□□□ -0.25
CPNE1-221ENST00000462352 PDCD2LQ9BRP1 358 aa13.52□□□□□ -0.25
CPNE1-221ENST00000462352 TMEM260Q9NX78 707 aa13.52□□□□□ -0.25
CPNE1-221ENST00000462352 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.52□□□□□ -0.25
CPNE1-221ENST00000462352 PCDHA6Q9UN73 950 aa13.52□□□□□ -0.25
CPNE1-221ENST00000462352 PCDHA4Q9UN74 947 aa13.52□□□□□ -0.25
CPNE1-221ENST00000462352 SMC3Q9UQE7 1217 aa13.52□□□□□ -0.25
CPNE1-221ENST00000462352 PCDHA8Q9Y5H6 950 aa13.52□□□□□ -0.25
CPNE1-221ENST00000462352 FRMPD4Q14CM0 1322 aa13.51□□□□□ -0.25
CPNE1-221ENST00000462352 RPTORQ8N122 1335 aa13.51□□□□□ -0.25
CPNE1-221ENST00000462352 B4DLN1 442 aa13.51□□□□□ -0.25
CPNE1-221ENST00000462352 FOSP01100 380 aaPredicted RBP13.51□□□□□ -0.25
CPNE1-221ENST00000462352 NR3C2P08235 984 aa13.51□□□□□ -0.25
CPNE1-221ENST00000462352 CYBAP13498 195 aa13.51□□□□□ -0.25
CPNE1-221ENST00000462352 FOSBP53539 338 aa13.51□□□□□ -0.25
CPNE1-221ENST00000462352 PDE4DQ08499 809 aa13.51□□□□□ -0.25
CPNE1-221ENST00000462352 AP3B2Q13367 1082 aa13.51□□□□□ -0.25
CPNE1-221ENST00000462352 TRIM29Q14134 588 aa13.51□□□□□ -0.25
CPNE1-221ENST00000462352 PGM5Q15124 567 aa13.51□□□□□ -0.25
CPNE1-221ENST00000462352 PRAMEF19Q5SWL8 479 aa13.51□□□□□ -0.25
CPNE1-221ENST00000462352 JAKMIP3Q5VZ66 844 aa13.51□□□□□ -0.25
CPNE1-221ENST00000462352 KRT40Q6A162 431 aa13.51□□□□□ -0.25
CPNE1-221ENST00000462352 GALNT17Q6IS24 598 aa13.51□□□□□ -0.25
CPNE1-221ENST00000462352 BLIDQ8IZY5 108 aa13.51□□□□□ -0.25
CPNE1-221ENST00000462352 REXO1Q8N1G1 1221 aaKnown RBP13.51□□□□□ -0.25
CPNE1-221ENST00000462352 DAGLBQ8NCG7 672 aa13.51□□□□□ -0.25
CPNE1-221ENST00000462352 RASGRP4Q8TDF6 673 aa13.51□□□□□ -0.25
CPNE1-221ENST00000462352 INTS4Q96HW7 963 aaKnown RBP13.51□□□□□ -0.25
CPNE1-221ENST00000462352 PGBD1Q96JS3 809 aa13.51□□□□□ -0.25
CPNE1-221ENST00000462352 C8orf76Q96K31 380 aa13.51□□□□□ -0.25
CPNE1-221ENST00000462352 CNPY2Q9Y2B0 182 aa13.51□□□□□ -0.25
CPNE1-221ENST00000462352 MYCP01106 439 aaPredicted RBP13.5□□□□□ -0.25
CPNE1-221ENST00000462352 ZNF865P0CJ78 1059 aaPredicted RBP13.5□□□□□ -0.25
CPNE1-221ENST00000462352 ACVR2BQ13705 512 aa13.5□□□□□ -0.25
CPNE1-221ENST00000462352 MTFR1Q15390 333 aa13.5□□□□□ -0.25
CPNE1-221ENST00000462352 EEPD1Q7L9B9 569 aa13.5□□□□□ -0.25
CPNE1-221ENST00000462352 TRPV1Q8NER1 839 aa13.5□□□□□ -0.25
CPNE1-221ENST00000462352 IL31RAQ8NI17 732 aa13.5□□□□□ -0.25
CPNE1-221ENST00000462352 ANO3Q9BYT9 981 aa13.5□□□□□ -0.25
CPNE1-221ENST00000462352 KATNBL1Q9H079 304 aa13.5□□□□□ -0.25
CPNE1-221ENST00000462352 ABHD16BQ9H3Z7 469 aa13.5□□□□□ -0.25
CPNE1-221ENST00000462352 NRBP1Q9UHY1 535 aa13.5□□□□□ -0.25
CPNE1-221ENST00000462352 ZHX1Q9UKY1 873 aaPredicted RBP13.5□□□□□ -0.25
CPNE1-221ENST00000462352 KIF3AQ9Y496 699 aa13.5□□□□□ -0.25
CPNE1-221ENST00000462352 M0R2N6 131 aa13.49□□□□□ -0.25
CPNE1-221ENST00000462352 MMP1P03956 469 aa13.49□□□□□ -0.25
CPNE1-221ENST00000462352 MYCLP12524 364 aaPredicted RBP13.49□□□□□ -0.25
CPNE1-221ENST00000462352 CCL5P13501 91 aa13.49□□□□□ -0.25
CPNE1-221ENST00000462352 CCND2P30279 289 aa13.49□□□□□ -0.25
CPNE1-221ENST00000462352 CCND3P30281 292 aaPredicted RBP13.49□□□□□ -0.25
CPNE1-221ENST00000462352 GUCY1B3Q02153 619 aa13.49□□□□□ -0.25
CPNE1-221ENST00000462352 STXBP2Q15833 593 aa13.49□□□□□ -0.25
CPNE1-221ENST00000462352 MCTP2Q6DN12 878 aa13.49□□□□□ -0.25
CPNE1-221ENST00000462352 VSIG10LQ86VR7 867 aa13.49□□□□□ -0.25
CPNE1-221ENST00000462352 FBXO16Q8IX29 292 aaPredicted RBP13.49□□□□□ -0.25
CPNE1-221ENST00000462352 TNS4Q8IZW8 715 aa13.49□□□□□ -0.25
CPNE1-221ENST00000462352 OXER1Q8TDS5 423 aa13.49□□□□□ -0.25
CPNE1-221ENST00000462352 UNC93B1Q9H1C4 597 aa13.49□□□□□ -0.25
CPNE1-221ENST00000462352 EHMT1Q9H9B1 1298 aa13.49□□□□□ -0.25
CPNE1-221ENST00000462352 HMX1Q9NP08 348 aaPredicted RBP13.49□□□□□ -0.25
CPNE1-221ENST00000462352 VTA1Q9NP79 307 aa13.49□□□□□ -0.25
CPNE1-221ENST00000462352 FOXD4L1Q9NU39 408 aa13.49□□□□□ -0.25
CPNE1-221ENST00000462352 LRRC37A2A6NM11 1700 aa13.49□□□□□ -0.25
CPNE1-221ENST00000462352 MCM3APO60318 1980 aa13.49□□□□□ -0.25
CPNE1-221ENST00000462352 EIF3JO75822 258 aaKnown RBP13.48□□□□□ -0.25
CPNE1-221ENST00000462352 CNGA1P29973 690 aa13.48□□□□□ -0.25
CPNE1-221ENST00000462352 KRT2P35908 639 aa13.48□□□□□ -0.25
CPNE1-221ENST00000462352 PCNX4Q63HM2 1172 aa13.48□□□□□ -0.25
CPNE1-221ENST00000462352 DIS3L2Q8IYB7 885 aaKnown RBP13.48□□□□□ -0.25
CPNE1-221ENST00000462352 FBXO18Q8NFZ0 1043 aa13.48□□□□□ -0.25
CPNE1-221ENST00000462352 ABHD8Q96I13 439 aa13.48□□□□□ -0.25
CPNE1-221ENST00000462352 ZFP91Q96JP5 570 aaPredicted RBP13.48□□□□□ -0.25
CPNE1-221ENST00000462352 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.48□□□□□ -0.25
CPNE1-221ENST00000462352 RNF208Q9H0X6 261 aa13.48□□□□□ -0.25
CPNE1-221ENST00000462352 BRMS1Q9HCU9 246 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms