RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 PXMP2Q9NR77 195 aa18.3■□□□□ 0.52
ERCC3-206ENST00000462306 GNEQ9Y223 722 aaKnown RBP18.3■□□□□ 0.52
ERCC3-206ENST00000462306 V9GY48 417 aaPredicted RBP18.3■□□□□ 0.52
ERCC3-206ENST00000462306 SMPD1P17405 629 aa18.29■□□□□ 0.52
ERCC3-206ENST00000462306 EIF2AK2P19525 551 aaKnown RBP18.29■□□□□ 0.52
ERCC3-206ENST00000462306 IRX5P78411 483 aaPredicted RBP18.29■□□□□ 0.52
ERCC3-206ENST00000462306 KLHDC9Q8NEP7 349 aa18.29■□□□□ 0.52
ERCC3-206ENST00000462306 ALDH8A1Q9H2A2 487 aaPredicted RBP18.29■□□□□ 0.52
ERCC3-206ENST00000462306 MYADML2A6NDP7 307 aa18.28■□□□□ 0.52
ERCC3-206ENST00000462306 KBTBD13C9JR72 458 aa18.28■□□□□ 0.52
ERCC3-206ENST00000462306 MEIS2O14770 477 aa18.28■□□□□ 0.52
ERCC3-206ENST00000462306 CTAGE5O15320 804 aa18.28■□□□□ 0.52
ERCC3-206ENST00000462306 MYCNP04198 464 aaPredicted RBP18.28■□□□□ 0.52
ERCC3-206ENST00000462306 PTGS1P23219 599 aa18.28■□□□□ 0.52
ERCC3-206ENST00000462306 GJA9P57773 515 aa18.28■□□□□ 0.52
ERCC3-206ENST00000462306 NKX3-2P78367 333 aa18.28■□□□□ 0.52
ERCC3-206ENST00000462306 NTRK3Q16288 839 aa18.28■□□□□ 0.52
ERCC3-206ENST00000462306 ARHGEF16Q5VV41 709 aa18.28■□□□□ 0.52
ERCC3-206ENST00000462306 WWC2Q6AWC2 1192 aa18.28■□□□□ 0.52
ERCC3-206ENST00000462306 CCSAPQ6IQ19 270 aaPredicted RBP18.28■□□□□ 0.52
ERCC3-206ENST00000462306 HEATR3Q7Z4Q2 680 aa18.28■□□□□ 0.52
ERCC3-206ENST00000462306 RNF180Q86T96 592 aa18.28■□□□□ 0.52
ERCC3-206ENST00000462306 GPKOWQ92917 476 aaPredicted RBP eCLIP18.28■□□□□ 0.52
ERCC3-206ENST00000462306 ZNF274Q96GC6 653 aaPredicted RBP18.28■□□□□ 0.52
ERCC3-206ENST00000462306 PDCD2LQ9BRP1 358 aa18.28■□□□□ 0.52
ERCC3-206ENST00000462306 LARP6Q9BRS8 491 aaKnown RBP18.28■□□□□ 0.52
ERCC3-206ENST00000462306 SENP6Q9GZR1 1112 aaPredicted RBP18.28■□□□□ 0.52
ERCC3-206ENST00000462306 PIK3CDO00329 1044 aa18.27■□□□□ 0.52
ERCC3-206ENST00000462306 NR3C2P08235 984 aa18.27■□□□□ 0.52
ERCC3-206ENST00000462306 CST5P28325 142 aaPredicted RBP18.27■□□□□ 0.52
ERCC3-206ENST00000462306 CCT2P78371 535 aaKnown RBP18.27■□□□□ 0.52
ERCC3-206ENST00000462306 STXBP2Q15833 593 aa18.27■□□□□ 0.52
ERCC3-206ENST00000462306 DUSP28Q4G0W2 176 aa18.27■□□□□ 0.52
ERCC3-206ENST00000462306 TYW1BQ6NUM6 668 aa18.27■□□□□ 0.52
ERCC3-206ENST00000462306 USP17L6PQ6QN14 398 aa18.27■□□□□ 0.52
ERCC3-206ENST00000462306 FCHSD1Q86WN1 690 aa18.27■□□□□ 0.52
ERCC3-206ENST00000462306 DPF3Q92784 378 aa18.27■□□□□ 0.52
ERCC3-206ENST00000462306 WDR11Q9BZH6 1224 aa18.27■□□□□ 0.52
ERCC3-206ENST00000462306 NCOA5Q9HCD5 579 aaKnown RBP18.27■□□□□ 0.52
ERCC3-206ENST00000462306 PHF24Q9UPV7 400 aa18.27■□□□□ 0.52
ERCC3-206ENST00000462306 ALPK3Q96L96 1907 aa18.26■□□□□ 0.51
ERCC3-206ENST00000462306 PGM5Q15124 567 aa18.26■□□□□ 0.51
ERCC3-206ENST00000462306 NOL8Q76FK4 1167 aaKnown RBP18.26■□□□□ 0.51
ERCC3-206ENST00000462306 TLK2Q86UE8 772 aa18.26■□□□□ 0.51
ERCC3-206ENST00000462306 IL31RAQ8NI17 732 aa18.26■□□□□ 0.51
ERCC3-206ENST00000462306 TSEN34Q9BSV6 310 aaKnown RBP18.26■□□□□ 0.51
ERCC3-206ENST00000462306 PSTPIP2Q9H939 334 aa18.26■□□□□ 0.51
ERCC3-206ENST00000462306 Q9Y3F1 56 aa18.26■□□□□ 0.51
ERCC3-206ENST00000462306 FRMPD4Q14CM0 1322 aa18.25■□□□□ 0.51
ERCC3-206ENST00000462306 hCG_1984214I3L0E3 225 aa18.25■□□□□ 0.51
ERCC3-206ENST00000462306 STXBP3O00186 592 aa18.25■□□□□ 0.51
ERCC3-206ENST00000462306 PRPF3O43395 683 aaKnown RBP18.25■□□□□ 0.51
ERCC3-206ENST00000462306 C6orf222P0C671 652 aaPredicted RBP18.25■□□□□ 0.51
ERCC3-206ENST00000462306 IFNAR1P17181 557 aa18.25■□□□□ 0.51
ERCC3-206ENST00000462306 KCNA10Q16322 511 aa18.25■□□□□ 0.51
ERCC3-206ENST00000462306 PKN1Q16512 942 aa18.25■□□□□ 0.51
ERCC3-206ENST00000462306 PFKFB3Q16875 520 aaPredicted RBP18.25■□□□□ 0.51
ERCC3-206ENST00000462306 LRRC26Q2I0M4 334 aa18.25■□□□□ 0.51
ERCC3-206ENST00000462306 VSIG10LQ86VR7 867 aa18.25■□□□□ 0.51
ERCC3-206ENST00000462306 ZNF713Q8N859 430 aaPredicted RBP18.25■□□□□ 0.51
ERCC3-206ENST00000462306 SMARCC2Q8TAQ2 1214 aa18.25■□□□□ 0.51
ERCC3-206ENST00000462306 SCFD2Q8WU76 684 aa18.25■□□□□ 0.51
ERCC3-206ENST00000462306 CUL5Q93034 780 aa18.25■□□□□ 0.51
ERCC3-206ENST00000462306 PHKBQ93100 1093 aa18.25■□□□□ 0.51
ERCC3-206ENST00000462306 FERMT2Q96AC1 680 aa18.25■□□□□ 0.51
ERCC3-206ENST00000462306 SPC25Q9HBM1 224 aa18.25■□□□□ 0.51
ERCC3-206ENST00000462306 DYNC1LI2O43237 492 aaPredicted RBP18.24■□□□□ 0.51
ERCC3-206ENST00000462306 EVI5O60447 810 aa18.24■□□□□ 0.51
ERCC3-206ENST00000462306 EIF3JO75822 258 aaKnown RBP18.24■□□□□ 0.51
ERCC3-206ENST00000462306 RGS20O76081 388 aa18.24■□□□□ 0.51
ERCC3-206ENST00000462306 ARIH2O95376 493 aa18.24■□□□□ 0.51
ERCC3-206ENST00000462306 ACLYP53396 1101 aa18.24■□□□□ 0.51
ERCC3-206ENST00000462306 AK2P54819 239 aa18.24■□□□□ 0.51
ERCC3-206ENST00000462306 PPP1R18Q6NYC8 613 aa18.24■□□□□ 0.51
ERCC3-206ENST00000462306 CCDC62Q6P9F0 684 aa18.24■□□□□ 0.51
ERCC3-206ENST00000462306 BARHL2Q9NY43 387 aa18.24■□□□□ 0.51
ERCC3-206ENST00000462306 TPCN1Q9ULQ1 816 aa18.24■□□□□ 0.51
ERCC3-206ENST00000462306 GTF3C3Q9Y5Q9 886 aa18.24■□□□□ 0.51
ERCC3-206ENST00000462306 A0A1W2PQ45 241 aaPredicted RBP18.23■□□□□ 0.51
ERCC3-206ENST00000462306 A0A1W2PQY0 241 aa18.23■□□□□ 0.51
ERCC3-206ENST00000462306 MOXD2PA6NHM9 499 aa18.23■□□□□ 0.51
ERCC3-206ENST00000462306 PPFIA3O75145 1194 aa18.23■□□□□ 0.51
ERCC3-206ENST00000462306 TXNP10599 105 aaKnown RBP18.23■□□□□ 0.51
ERCC3-206ENST00000462306 MYCLP12524 364 aaPredicted RBP18.23■□□□□ 0.51
ERCC3-206ENST00000462306 SCG2P13521 617 aa18.23■□□□□ 0.51
ERCC3-206ENST00000462306 ATN1P54259 1190 aaPredicted RBP18.23■□□□□ 0.51
ERCC3-206ENST00000462306 NAPAP54920 295 aa18.23■□□□□ 0.51
ERCC3-206ENST00000462306 BEX3Q00994 111 aa18.23■□□□□ 0.51
ERCC3-206ENST00000462306 STK3Q13188 491 aa18.23■□□□□ 0.51
ERCC3-206ENST00000462306 UBE2SQ16763 222 aa18.23■□□□□ 0.51
ERCC3-206ENST00000462306 GNASQ5JWF2 1037 aa18.23■□□□□ 0.51
ERCC3-206ENST00000462306 PRPF38BQ5VTL8 546 aaKnown RBP18.23■□□□□ 0.51
ERCC3-206ENST00000462306 SLC39A5Q6ZMH5 540 aa18.23■□□□□ 0.51
ERCC3-206ENST00000462306 SEPT14Q6ZU15 432 aa18.23■□□□□ 0.51
ERCC3-206ENST00000462306 PCSK9Q8NBP7 692 aaKnown RBP18.23■□□□□ 0.51
ERCC3-206ENST00000462306 RNF26Q9BY78 433 aaPredicted RBP18.23■□□□□ 0.51
ERCC3-206ENST00000462306 AP5M1Q9H0R1 490 aa18.23■□□□□ 0.51
ERCC3-206ENST00000462306 RBM27Q9P2N5 1060 aaKnown RBP18.23■□□□□ 0.51
ERCC3-206ENST00000462306 NKRFO15226 690 aaKnown RBP eCLIP18.22■□□□□ 0.51
ERCC3-206ENST00000462306 ASGR1P07306 291 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms