RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 SYNRGQ9UMZ2 1314 aa13.98□□□□□ -0.17
COL4A6-204ENST00000461897 PNMA6FA0A0J9YX94 578 aa13.98□□□□□ -0.17
COL4A6-204ENST00000461897 LRRC10BA6NIK2 292 aa13.98□□□□□ -0.17
COL4A6-204ENST00000461897 CD44P16070 742 aaKnown RBP13.98□□□□□ -0.17
COL4A6-204ENST00000461897 ECE1P42892 770 aa13.98□□□□□ -0.17
COL4A6-204ENST00000461897 TNNI2P48788 182 aa13.98□□□□□ -0.17
COL4A6-204ENST00000461897 ATP2C1P98194 919 aaPredicted RBP13.98□□□□□ -0.17
COL4A6-204ENST00000461897 KIF4BQ2VIQ3 1234 aa13.98□□□□□ -0.17
COL4A6-204ENST00000461897 ARHGAP27Q6ZUM4 889 aa13.98□□□□□ -0.17
COL4A6-204ENST00000461897 SYMPKQ92797 1274 aaKnown RBP13.98□□□□□ -0.17
COL4A6-204ENST00000461897 NUP88Q99567 741 aaPredicted RBP13.98□□□□□ -0.17
COL4A6-204ENST00000461897 SYNPO2Q9UMS6 1093 aa13.98□□□□□ -0.17
COL4A6-204ENST00000461897 CCDC194A0A1B0GVG4 234 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 ZBTB5O15062 677 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 LMNB1P20700 586 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 GNA11P29992 359 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 TUBB4BP68371 445 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 PTGDRQ13258 359 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 TNFAIP1Q13829 316 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 E2F4Q16254 413 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 CC2D1AQ6P1N0 951 aaPredicted RBP13.97□□□□□ -0.17
COL4A6-204ENST00000461897 ACER1Q8TDN7 264 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 DHX58Q96C10 678 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 MRPL44Q9H9J2 332 aaKnown RBP13.97□□□□□ -0.17
COL4A6-204ENST00000461897 C6orf50Q9HD87 102 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 HACL1Q9UJ83 578 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 CCDC66A2RUB6 948 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 TEX33O43247 280 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 MFAP3LO75121 409 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 TBC1D8O95759 1140 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 MCM7P33993 719 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 CAP2P40123 477 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 INF2Q27J81 1249 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 HSP90AA4PQ58FG1 418 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 IGSF22Q8N9C0 903 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 EPSTI1Q96J88 318 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 ST7Q9NRC1 585 aa13.97□□□□□ -0.17
COL4A6-204ENST00000461897 LIMA1Q9UHB6 759 aaKnown RBP13.97□□□□□ -0.17
COL4A6-204ENST00000461897 PHF20L1A8MW92 1017 aa13.96□□□□□ -0.17
COL4A6-204ENST00000461897 CYP2C19P33261 490 aa13.96□□□□□ -0.17
COL4A6-204ENST00000461897 RBL2Q08999 1139 aa13.96□□□□□ -0.17
COL4A6-204ENST00000461897 KIAA1755Q5JYT7 1200 aa13.96□□□□□ -0.17
COL4A6-204ENST00000461897 PPP1R18Q6NYC8 613 aa13.96□□□□□ -0.17
COL4A6-204ENST00000461897 RAD9BQ6WBX8 426 aa13.96□□□□□ -0.17
COL4A6-204ENST00000461897 PPFIBP1Q86W92 1011 aa13.96□□□□□ -0.17
COL4A6-204ENST00000461897 CNGA4Q8IV77 575 aa13.96□□□□□ -0.17
COL4A6-204ENST00000461897 MSL3Q8N5Y2 521 aaKnown RBP13.96□□□□□ -0.17
COL4A6-204ENST00000461897 GOLGA1Q92805 767 aa13.96□□□□□ -0.17
COL4A6-204ENST00000461897 ARHGEF10LQ9HCE6 1279 aa13.96□□□□□ -0.17
COL4A6-204ENST00000461897 SOWAHDA6NJG2 315 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 TXLNAP40222 546 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 QRICH1Q2TAL8 776 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 FILIP1LQ4L180 1135 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 KRT25Q7Z3Z0 450 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 SPICE1Q8N0Z3 855 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 REXO1Q8N1G1 1221 aaKnown RBP13.95□□□□□ -0.18
COL4A6-204ENST00000461897 C4orf32Q8N8J7 132 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 TMX2Q9Y320 296 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 CCDC151A5D8V7 595 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 BMP3P12645 472 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 ADCY7P51828 1080 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 SPAG1Q07617 926 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 TRIM14Q14142 442 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 MTF1Q14872 753 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 BRD3Q15059 726 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 CDC37Q16543 378 aaPredicted RBP13.95□□□□□ -0.18
COL4A6-204ENST00000461897 PDXDC2PQ6P474 469 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 SRGAP1Q7Z6B7 1085 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 GPC2Q8N158 579 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 TRPM4Q8TD43 1214 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 HNRNPLLQ8WVV9 542 aaKnown RBP13.95□□□□□ -0.18
COL4A6-204ENST00000461897 SYT17Q9BSW7 474 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 DESI2Q9BSY9 194 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 TMEM260Q9NX78 707 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 GPRC5DQ9NZD1 345 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 BIN2Q9UBW5 565 aaPredicted RBP13.95□□□□□ -0.18
COL4A6-204ENST00000461897 RWDD2AQ9UIY3 292 aa13.95□□□□□ -0.18
COL4A6-204ENST00000461897 POTEB2H3BUK9 544 aa13.94□□□□□ -0.18
COL4A6-204ENST00000461897 GTPBP6O43824 516 aaPredicted RBP13.94□□□□□ -0.18
COL4A6-204ENST00000461897 SASH3O75995 380 aa13.94□□□□□ -0.18
COL4A6-204ENST00000461897 AFMP43652 599 aa13.94□□□□□ -0.18
COL4A6-204ENST00000461897 SEMA3FQ13275 785 aa13.94□□□□□ -0.18
COL4A6-204ENST00000461897 NONOQ15233 471 aaKnown RBP eCLIP13.94□□□□□ -0.18
COL4A6-204ENST00000461897 IL17AQ16552 155 aa13.94□□□□□ -0.18
COL4A6-204ENST00000461897 BTNL9Q6UXG8 535 aa13.94□□□□□ -0.18
COL4A6-204ENST00000461897 CCDC84Q86UT8 332 aaPredicted RBP13.94□□□□□ -0.18
COL4A6-204ENST00000461897 IQUBQ8NA54 791 aa13.94□□□□□ -0.18
COL4A6-204ENST00000461897 PARD6BQ9BYG5 372 aa13.94□□□□□ -0.18
COL4A6-204ENST00000461897 GLIS2Q9BZE0 524 aaPredicted RBP13.94□□□□□ -0.18
COL4A6-204ENST00000461897 DEFB129Q9H1M3 183 aa13.94□□□□□ -0.18
COL4A6-204ENST00000461897 RIC8AQ9NPQ8 531 aa13.94□□□□□ -0.18
COL4A6-204ENST00000461897 MYO1AQ9UBC5 1043 aa13.94□□□□□ -0.18
COL4A6-204ENST00000461897 CDC23Q9UJX2 597 aa13.94□□□□□ -0.18
COL4A6-204ENST00000461897 H7C1D1 291 aa13.93□□□□□ -0.18
COL4A6-204ENST00000461897 KIF5CO60282 957 aa13.93□□□□□ -0.18
COL4A6-204ENST00000461897 GYPCP04921 128 aa13.93□□□□□ -0.18
COL4A6-204ENST00000461897 ASNSP08243 561 aa13.93□□□□□ -0.18
COL4A6-204ENST00000461897 SYDE2Q5VT97 1194 aa13.93□□□□□ -0.18
COL4A6-204ENST00000461897 ARL6IP4Q66PJ3 421 aaKnown RBP13.93□□□□□ -0.18
COL4A6-204ENST00000461897 TMTC1Q8IUR5 882 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms