RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 DCP1AQ9NPI6 582 aaPredicted RBP4.27□□□□□ -1.73
HDAC6-212ENST00000461608 C19orf73Q9NVV2 129 aa4.27□□□□□ -1.73
HDAC6-212ENST00000461608 MCM8Q9UJA3 840 aa4.27□□□□□ -1.73
HDAC6-212ENST00000461608 PITPNM2Q9BZ72 1349 aa4.26□□□□□ -1.73
HDAC6-212ENST00000461608 SHISA3A0PJX4 238 aa4.26□□□□□ -1.73
HDAC6-212ENST00000461608 C2orf71A6NGG8 1288 aa4.26□□□□□ -1.73
HDAC6-212ENST00000461608 STXBP3O00186 592 aa4.26□□□□□ -1.73
HDAC6-212ENST00000461608 PDE8AO60658 829 aa4.26□□□□□ -1.73
HDAC6-212ENST00000461608 C6orf222P0C671 652 aaPredicted RBP4.26□□□□□ -1.73
HDAC6-212ENST00000461608 POU3F2P20265 443 aaPredicted RBP4.26□□□□□ -1.73
HDAC6-212ENST00000461608 HOXA5P20719 270 aa4.26□□□□□ -1.73
HDAC6-212ENST00000461608 TPP2P29144 1249 aaPredicted RBP4.26□□□□□ -1.73
HDAC6-212ENST00000461608 LTKP29376 864 aa4.26□□□□□ -1.73
HDAC6-212ENST00000461608 CNGA1P29973 690 aa4.26□□□□□ -1.73
HDAC6-212ENST00000461608 GRIA2P42262 883 aa4.26□□□□□ -1.73
HDAC6-212ENST00000461608 CTSKP43235 329 aa4.26□□□□□ -1.73
HDAC6-212ENST00000461608 CT47A1Q5JQC4 288 aaPredicted RBP4.26□□□□□ -1.73
HDAC6-212ENST00000461608 WWC2Q6AWC2 1192 aa4.26□□□□□ -1.73
HDAC6-212ENST00000461608 BRAPQ7Z569 592 aa4.26□□□□□ -1.73
HDAC6-212ENST00000461608 PPIL6Q8IXY8 311 aa4.26□□□□□ -1.73
HDAC6-212ENST00000461608 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.26□□□□□ -1.73
HDAC6-212ENST00000461608 GPATCH3Q96I76 525 aa4.26□□□□□ -1.73
HDAC6-212ENST00000461608 METTL14Q9HCE5 456 aaKnown RBP4.26□□□□□ -1.73
HDAC6-212ENST00000461608 GPR27Q9NS67 375 aa4.26□□□□□ -1.73
HDAC6-212ENST00000461608 NDOR1Q9UHB4 597 aa4.26□□□□□ -1.73
HDAC6-212ENST00000461608 DUSP13Q9UII6 198 aa4.26□□□□□ -1.73
HDAC6-212ENST00000461608 TCFL5Q9UL49 500 aa4.26□□□□□ -1.73
HDAC6-212ENST00000461608 CTNND2Q9UQB3 1225 aa4.26□□□□□ -1.73
HDAC6-212ENST00000461608 NPFFR2Q9Y5X5 522 aa4.26□□□□□ -1.73
HDAC6-212ENST00000461608 MEIS1O00470 390 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 IRS4O14654 1257 aaPredicted RBP4.25□□□□□ -1.73
HDAC6-212ENST00000461608 MYO1BO43795 1136 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 FOXD2O60548 495 aaPredicted RBP4.25□□□□□ -1.73
HDAC6-212ENST00000461608 RAPGEF3O95398 923 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 TBC1D8O95759 1140 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 MYCLP1P12525 358 aaPredicted RBP4.25□□□□□ -1.73
HDAC6-212ENST00000461608 RAC2P15153 192 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 VAV1P15498 845 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 PAMP19021 973 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 PMLP29590 882 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 ECI1P42126 302 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 GTF2A2P52657 109 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 DPY19L1Q2PZI1 675 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 GAB4Q2WGN9 574 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 USP53Q70EK8 1073 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 LRRTM3Q86VH5 581 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 IFNL3Q8IZI9 196 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 NPLOC4Q8TAT6 608 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 KCNN1Q92952 543 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 FCRL2Q96LA5 508 aaPredicted RBP4.25□□□□□ -1.73
HDAC6-212ENST00000461608 MMP19Q99542 508 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 ALG1Q9BT22 464 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 SLC12A9Q9BXP2 914 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 DUSP15Q9H1R2 295 aaPredicted RBP4.25□□□□□ -1.73
HDAC6-212ENST00000461608 SLC52A2Q9HAB3 445 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 KCNK12Q9HB15 430 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 TRIM39Q9HCM9 518 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 PARD6AQ9NPB6 346 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 SEMA3GQ9NS98 782 aa4.25□□□□□ -1.73
HDAC6-212ENST00000461608 A0A087X0B3 334 aa4.24□□□□□ -1.73
HDAC6-212ENST00000461608 GSG1L2A8MUP6 293 aa4.24□□□□□ -1.73
HDAC6-212ENST00000461608 ALG1L2C9J202 215 aa4.24□□□□□ -1.73
HDAC6-212ENST00000461608 H3BS24 57 aa4.24□□□□□ -1.73
HDAC6-212ENST00000461608 OPA1O60313 960 aa4.24□□□□□ -1.73
HDAC6-212ENST00000461608 VAMP4O75379 141 aa4.24□□□□□ -1.73
HDAC6-212ENST00000461608 KRT1P04264 644 aa4.24□□□□□ -1.73
HDAC6-212ENST00000461608 THBDP07204 575 aa4.24□□□□□ -1.73
HDAC6-212ENST00000461608 SYPP08247 313 aa4.24□□□□□ -1.73
HDAC6-212ENST00000461608 IFNGR1P15260 489 aa4.24□□□□□ -1.73
HDAC6-212ENST00000461608 LTBRP36941 435 aa4.24□□□□□ -1.73
HDAC6-212ENST00000461608 GPR85P60893 370 aa4.24□□□□□ -1.73
HDAC6-212ENST00000461608 CBX2Q14781 532 aaPredicted RBP4.24□□□□□ -1.73
HDAC6-212ENST00000461608 NFIXQ14938 502 aa4.24□□□□□ -1.73
HDAC6-212ENST00000461608 KIZQ2M2Z5 673 aa4.24□□□□□ -1.73
HDAC6-212ENST00000461608 UBE2R2Q712K3 238 aaPredicted RBP4.24□□□□□ -1.73
HDAC6-212ENST00000461608 RNF180Q86T96 592 aa4.24□□□□□ -1.73
HDAC6-212ENST00000461608 MTDHQ86UE4 582 aaKnown RBP4.24□□□□□ -1.73
HDAC6-212ENST00000461608 DHX37Q8IY37 1157 aaKnown RBP4.24□□□□□ -1.73
HDAC6-212ENST00000461608 NAT16Q8N8M0 369 aa4.24□□□□□ -1.73
HDAC6-212ENST00000461608 DIO2Q92813 273 aa4.24□□□□□ -1.73
HDAC6-212ENST00000461608 MAGEB10Q96LZ2 347 aaPredicted RBP4.24□□□□□ -1.73
HDAC6-212ENST00000461608 FCRL3Q96P31 734 aaPredicted RBP4.24□□□□□ -1.73
HDAC6-212ENST00000461608 LGR4Q9BXB1 951 aa4.24□□□□□ -1.73
HDAC6-212ENST00000461608 PCGF6Q9BYE7 350 aa4.24□□□□□ -1.73
HDAC6-212ENST00000461608 ATP13A1Q9HD20 1204 aa4.24□□□□□ -1.73
HDAC6-212ENST00000461608 NPHP3-ACAD11A0A0J9YXS1 232 aa4.23□□□□□ -1.73
HDAC6-212ENST00000461608 GSTA4O15217 222 aa4.23□□□□□ -1.73
HDAC6-212ENST00000461608 FGF10O15520 208 aaPredicted RBP4.23□□□□□ -1.73
HDAC6-212ENST00000461608 DNAJC8O75937 253 aaPredicted RBP4.23□□□□□ -1.73
HDAC6-212ENST00000461608 GSTM1P09488 218 aa4.23□□□□□ -1.73
HDAC6-212ENST00000461608 BMP7P18075 431 aa4.23□□□□□ -1.73
HDAC6-212ENST00000461608 AMPD3Q01432 767 aa4.23□□□□□ -1.73
HDAC6-212ENST00000461608 DUSP4Q13115 394 aa4.23□□□□□ -1.73
HDAC6-212ENST00000461608 DHCR24Q15392 516 aa4.23□□□□□ -1.73
HDAC6-212ENST00000461608 NTRK3Q16288 839 aa4.23□□□□□ -1.73
HDAC6-212ENST00000461608 PRSS53Q2L4Q9 553 aa4.23□□□□□ -1.73
HDAC6-212ENST00000461608 FAM47CQ5HY64 1035 aa4.23□□□□□ -1.73
HDAC6-212ENST00000461608 CDKAL1Q5VV42 579 aa4.23□□□□□ -1.73
HDAC6-212ENST00000461608 DDX53Q86TM3 631 aaKnown RBP4.23□□□□□ -1.73
HDAC6-212ENST00000461608 KREMEN2Q8NCW0 462 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms