RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.26□□□□□ -1.25
CFHR3-204ENST00000461558 TRBV23OR9-2A0A075B6M9 112 aa7.25□□□□□ -1.25
CFHR3-204ENST00000461558 NPHP3-ACAD11A0A0J9YXS1 232 aa7.25□□□□□ -1.25
CFHR3-204ENST00000461558 C1QTNF3-AMACRE9PGA6 284 aa7.25□□□□□ -1.25
CFHR3-204ENST00000461558 SMARCA5O60264 1052 aaPredicted RBP7.25□□□□□ -1.25
CFHR3-204ENST00000461558 PPM1BO75688 479 aa7.25□□□□□ -1.25
CFHR3-204ENST00000461558 C8BP07358 591 aa7.25□□□□□ -1.25
CFHR3-204ENST00000461558 PAMP19021 973 aa7.25□□□□□ -1.25
CFHR3-204ENST00000461558 GRB10Q13322 594 aa7.25□□□□□ -1.25
CFHR3-204ENST00000461558 COL9A2Q14055 689 aaPredicted RBP7.25□□□□□ -1.25
CFHR3-204ENST00000461558 USP33Q8TEY7 942 aa7.25□□□□□ -1.25
CFHR3-204ENST00000461558 FGD4Q96M96 766 aa7.25□□□□□ -1.25
CFHR3-204ENST00000461558 GORASP1Q9BQQ3 440 aa7.25□□□□□ -1.25
CFHR3-204ENST00000461558 KRTAP3-1Q9BYR8 98 aa7.25□□□□□ -1.25
CFHR3-204ENST00000461558 BACH2Q9BYV9 841 aa7.25□□□□□ -1.25
CFHR3-204ENST00000461558 PCDHB10Q9UN67 800 aa7.25□□□□□ -1.25
CFHR3-204ENST00000461558 NPHS1O60500 1241 aa7.24□□□□□ -1.25
CFHR3-204ENST00000461558 ZNF16P17020 682 aaPredicted RBP7.24□□□□□ -1.25
CFHR3-204ENST00000461558 RBM10P98175 930 aaKnown RBP7.24□□□□□ -1.25
CFHR3-204ENST00000461558 SLC7A5Q01650 507 aa7.24□□□□□ -1.25
CFHR3-204ENST00000461558 ARHGEF39Q8N4T4 335 aa7.24□□□□□ -1.25
CFHR3-204ENST00000461558 C19orf47Q8N9M1 422 aaKnown RBP7.24□□□□□ -1.25
CFHR3-204ENST00000461558 SORCS2Q96PQ0 1159 aa7.24□□□□□ -1.25
CFHR3-204ENST00000461558 GINM1Q9NU53 330 aa7.24□□□□□ -1.25
CFHR3-204ENST00000461558 SIT1Q9Y3P8 196 aa7.24□□□□□ -1.25
CFHR3-204ENST00000461558 C7orf72A4D263 438 aa7.23□□□□□ -1.25
CFHR3-204ENST00000461558 OVOL3O00110 214 aa7.23□□□□□ -1.25
CFHR3-204ENST00000461558 PLATP00750 562 aa7.23□□□□□ -1.25
CFHR3-204ENST00000461558 NTRK1P04629 796 aa7.23□□□□□ -1.25
CFHR3-204ENST00000461558 THBS2P35442 1172 aa7.23□□□□□ -1.25
CFHR3-204ENST00000461558 RACK1P63244 317 aaKnown RBP7.23□□□□□ -1.25
CFHR3-204ENST00000461558 TTC9BQ8N6N2 239 aa7.23□□□□□ -1.25
CFHR3-204ENST00000461558 RCC1LQ96I51 464 aaKnown RBP7.23□□□□□ -1.25
CFHR3-204ENST00000461558 LOXL4Q96JB6 756 aa7.23□□□□□ -1.25
CFHR3-204ENST00000461558 SAMD11Q96NU1 681 aa7.23□□□□□ -1.25
CFHR3-204ENST00000461558 C1QTNF3Q9BXJ4 246 aa7.23□□□□□ -1.25
CFHR3-204ENST00000461558 DDX41Q9UJV9 622 aaKnown RBP7.23□□□□□ -1.25
CFHR3-204ENST00000461558 A0A1W2PQH9 124 aa7.22□□□□□ -1.25
CFHR3-204ENST00000461558 FUCA1P04066 466 aa7.22□□□□□ -1.25
CFHR3-204ENST00000461558 ZNF20P17024 532 aa7.22□□□□□ -1.25
CFHR3-204ENST00000461558 RPL13P26373 211 aaKnown RBP7.22□□□□□ -1.25
CFHR3-204ENST00000461558 RGL3Q3MIN7 710 aa7.22□□□□□ -1.25
CFHR3-204ENST00000461558 TBC1D10BQ4KMP7 808 aaPredicted RBP7.22□□□□□ -1.25
CFHR3-204ENST00000461558 ETV3LQ6ZN32 361 aa7.22□□□□□ -1.25
CFHR3-204ENST00000461558 DCP2Q8IU60 420 aaKnown RBP7.22□□□□□ -1.25
CFHR3-204ENST00000461558 KLHL6Q8WZ60 621 aa7.22□□□□□ -1.25
CFHR3-204ENST00000461558 C8orf49Q96NF6 230 aa7.22□□□□□ -1.25
CFHR3-204ENST00000461558 C11orf84Q9BUA3 381 aaPredicted RBP7.22□□□□□ -1.25
CFHR3-204ENST00000461558 PCDH18Q9HCL0 1135 aa7.22□□□□□ -1.25
CFHR3-204ENST00000461558 EIF6P56537 245 aaKnown RBP7.21□□□□□ -1.26
CFHR3-204ENST00000461558 PLEKHO2Q8TD55 490 aa7.21□□□□□ -1.26
CFHR3-204ENST00000461558 SYT3Q9BQG1 590 aa7.21□□□□□ -1.26
CFHR3-204ENST00000461558 SUGT1Q9Y2Z0 365 aa7.21□□□□□ -1.26
CFHR3-204ENST00000461558 SOX9P48436 509 aa7.2□□□□□ -1.26
CFHR3-204ENST00000461558 GIPRP48546 466 aa7.2□□□□□ -1.26
CFHR3-204ENST00000461558 HMGA2P52926 109 aa7.2□□□□□ -1.26
CFHR3-204ENST00000461558 PAK2Q13177 524 aa7.2□□□□□ -1.26
CFHR3-204ENST00000461558 FAM26FQ5R3K3 315 aa7.2□□□□□ -1.26
CFHR3-204ENST00000461558 MBLAC2Q68D91 279 aa7.2□□□□□ -1.26
CFHR3-204ENST00000461558 MIB1Q86YT6 1006 aa7.2□□□□□ -1.26
CFHR3-204ENST00000461558 LGI4Q8N135 537 aa7.2□□□□□ -1.26
CFHR3-204ENST00000461558 KYQ8NBH2 561 aa7.2□□□□□ -1.26
CFHR3-204ENST00000461558 OR6P1Q8NGX9 317 aa7.2□□□□□ -1.26
CFHR3-204ENST00000461558 AP5M1Q9H0R1 490 aa7.2□□□□□ -1.26
CFHR3-204ENST00000461558 CLEC1BQ9P126 229 aa7.2□□□□□ -1.26
CFHR3-204ENST00000461558 EFR3BQ9Y2G0 817 aa7.2□□□□□ -1.26
CFHR3-204ENST00000461558 C6P13671 934 aa7.19□□□□□ -1.26
CFHR3-204ENST00000461558 KIAA2012Q0VF49 1180 aa7.19□□□□□ -1.26
CFHR3-204ENST00000461558 FAM26EQ8N5C1 309 aa7.19□□□□□ -1.26
CFHR3-204ENST00000461558 ZNF513Q8N8E2 541 aaPredicted RBP7.19□□□□□ -1.26
CFHR3-204ENST00000461558 DPF3Q92784 378 aa7.19□□□□□ -1.26
CFHR3-204ENST00000461558 SPATA32Q96LK8 384 aa7.19□□□□□ -1.26
CFHR3-204ENST00000461558 MMP19Q99542 508 aa7.19□□□□□ -1.26
CFHR3-204ENST00000461558 MARCH2Q9P0N8 246 aa7.19□□□□□ -1.26
CFHR3-204ENST00000461558 INVSQ9Y283 1065 aa7.19□□□□□ -1.26
CFHR3-204ENST00000461558 MROH6A6NGR9 719 aa7.18□□□□□ -1.26
CFHR3-204ENST00000461558 SGSM2O43147 1006 aa7.18□□□□□ -1.26
CFHR3-204ENST00000461558 PLS3P13797 630 aa7.18□□□□□ -1.26
CFHR3-204ENST00000461558 GDF5P43026 501 aa7.18□□□□□ -1.26
CFHR3-204ENST00000461558 C9orf131Q5VYM1 1079 aa7.18□□□□□ -1.26
CFHR3-204ENST00000461558 TTLL6Q8N841 843 aa7.18□□□□□ -1.26
CFHR3-204ENST00000461558 COPS5Q92905 334 aa7.18□□□□□ -1.26
CFHR3-204ENST00000461558 SCAND2PQ9GZW5 306 aaPredicted RBP7.18□□□□□ -1.26
CFHR3-204ENST00000461558 APEX2Q9UBZ4 518 aa7.18□□□□□ -1.26
CFHR3-204ENST00000461558 AKT3Q9Y243 479 aa7.18□□□□□ -1.26
CFHR3-204ENST00000461558 SCRN1Q12765 414 aa7.17□□□□□ -1.26
CFHR3-204ENST00000461558 BORAQ6PGQ7 559 aa7.17□□□□□ -1.26
CFHR3-204ENST00000461558 CD300LDQ6UXZ3 194 aa7.17□□□□□ -1.26
CFHR3-204ENST00000461558 FAM124AQ86V42 546 aa7.17□□□□□ -1.26
CFHR3-204ENST00000461558 ZNF654Q8IZM8 581 aa7.17□□□□□ -1.26
CFHR3-204ENST00000461558 CHST13Q8NET6 341 aa7.17□□□□□ -1.26
CFHR3-204ENST00000461558 SSBP3Q9BWW4 388 aaPredicted RBP7.17□□□□□ -1.26
CFHR3-204ENST00000461558 GPRC5CQ9NQ84 441 aa7.17□□□□□ -1.26
CFHR3-204ENST00000461558 ANKRD34BA5PLL1 514 aa7.16□□□□□ -1.26
CFHR3-204ENST00000461558 KCNH1O95259 989 aa7.16□□□□□ -1.26
CFHR3-204ENST00000461558 THBDP07204 575 aa7.16□□□□□ -1.26
CFHR3-204ENST00000461558 TACR2P21452 398 aa7.16□□□□□ -1.26
CFHR3-204ENST00000461558 ITGA1P56199 1179 aa7.16□□□□□ -1.26
CFHR3-204ENST00000461558 PRR31Q5SQ13 230 aa7.16□□□□□ -1.26
CFHR3-204ENST00000461558 MCTP2Q6DN12 878 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms