RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 PGK1P00558 417 aa23.1■■□□□ 1.29
SNAPC3-204ENST00000461041 MYCNP04198 464 aaPredicted RBP23.1■■□□□ 1.29
SNAPC3-204ENST00000461041 NEK4P51957 841 aa23.1■■□□□ 1.29
SNAPC3-204ENST00000461041 TNFAIP2Q03169 654 aa23.1■■□□□ 1.29
SNAPC3-204ENST00000461041 STK3Q13188 491 aa23.1■■□□□ 1.29
SNAPC3-204ENST00000461041 ANKRD1Q15327 319 aa23.1■■□□□ 1.29
SNAPC3-204ENST00000461041 LRRC41Q15345 812 aa23.1■■□□□ 1.29
SNAPC3-204ENST00000461041 IQSEC1Q6DN90 963 aa23.1■■□□□ 1.29
SNAPC3-204ENST00000461041 FCHSD1Q86WN1 690 aa23.1■■□□□ 1.29
SNAPC3-204ENST00000461041 CUL5Q93034 780 aa23.1■■□□□ 1.29
SNAPC3-204ENST00000461041 PHKBQ93100 1093 aa23.1■■□□□ 1.29
SNAPC3-204ENST00000461041 C22orf23Q9BZE7 217 aa23.1■■□□□ 1.29
SNAPC3-204ENST00000461041 C11orf49Q9H6J7 331 aa23.1■■□□□ 1.29
SNAPC3-204ENST00000461041 SYNRGQ9UMZ2 1314 aa23.09■■□□□ 1.29
SNAPC3-204ENST00000461041 hCG_1984214I3L0E3 225 aa23.09■■□□□ 1.29
SNAPC3-204ENST00000461041 PIK3CDO00329 1044 aa23.09■■□□□ 1.29
SNAPC3-204ENST00000461041 MEIS2O14770 477 aa23.09■■□□□ 1.29
SNAPC3-204ENST00000461041 PRPF3O43395 683 aaKnown RBP23.09■■□□□ 1.29
SNAPC3-204ENST00000461041 ADAMTS4O75173 837 aa23.09■■□□□ 1.29
SNAPC3-204ENST00000461041 COL6A1P12109 1028 aa23.09■■□□□ 1.29
SNAPC3-204ENST00000461041 IFNAR1P17181 557 aa23.09■■□□□ 1.29
SNAPC3-204ENST00000461041 USP17L6PQ6QN14 398 aa23.09■■□□□ 1.29
SNAPC3-204ENST00000461041 ZNF713Q8N859 430 aaPredicted RBP23.09■■□□□ 1.29
SNAPC3-204ENST00000461041 SMARCC2Q8TAQ2 1214 aa23.09■■□□□ 1.29
SNAPC3-204ENST00000461041 PDCD2LQ9BRP1 358 aa23.09■■□□□ 1.29
SNAPC3-204ENST00000461041 PSTPIP2Q9H939 334 aa23.09■■□□□ 1.29
SNAPC3-204ENST00000461041 TPCN1Q9ULQ1 816 aa23.09■■□□□ 1.29
SNAPC3-204ENST00000461041 RBM47A0AV96 593 aaKnown RBP23.08■■□□□ 1.29
SNAPC3-204ENST00000461041 KBTBD13C9JR72 458 aa23.08■■□□□ 1.29
SNAPC3-204ENST00000461041 STXBP3O00186 592 aa23.08■■□□□ 1.29
SNAPC3-204ENST00000461041 NR3C2P08235 984 aa23.08■■□□□ 1.29
SNAPC3-204ENST00000461041 SMPD1P17405 629 aa23.08■■□□□ 1.29
SNAPC3-204ENST00000461041 NAPAP54920 295 aa23.08■■□□□ 1.29
SNAPC3-204ENST00000461041 STXBP2Q15833 593 aa23.08■■□□□ 1.29
SNAPC3-204ENST00000461041 PFKFB3Q16875 520 aaPredicted RBP23.08■■□□□ 1.29
SNAPC3-204ENST00000461041 TYW1BQ6NUM6 668 aa23.08■■□□□ 1.29
SNAPC3-204ENST00000461041 PPP1R18Q6NYC8 613 aa23.08■■□□□ 1.29
SNAPC3-204ENST00000461041 NOL8Q76FK4 1167 aaKnown RBP23.08■■□□□ 1.29
SNAPC3-204ENST00000461041 RNF180Q86T96 592 aa23.08■■□□□ 1.29
SNAPC3-204ENST00000461041 HTATIP2Q9BUP3 242 aa23.08■■□□□ 1.29
SNAPC3-204ENST00000461041 RBM27Q9P2N5 1060 aaKnown RBP23.08■■□□□ 1.29
SNAPC3-204ENST00000461041 GNEQ9Y223 722 aaKnown RBP23.08■■□□□ 1.29
SNAPC3-204ENST00000461041 PPFIA3O75145 1194 aa23.07■■□□□ 1.28
SNAPC3-204ENST00000461041 SCG2P13521 617 aa23.07■■□□□ 1.28
SNAPC3-204ENST00000461041 RBM25P49756 843 aaKnown RBP23.07■■□□□ 1.28
SNAPC3-204ENST00000461041 AKAP17AQ02040 695 aaKnown RBP23.07■■□□□ 1.28
SNAPC3-204ENST00000461041 PGM5Q15124 567 aa23.07■■□□□ 1.28
SNAPC3-204ENST00000461041 PKN1Q16512 942 aa23.07■■□□□ 1.28
SNAPC3-204ENST00000461041 TMEM63BQ5T3F8 832 aa23.07■■□□□ 1.28
SNAPC3-204ENST00000461041 KIF2CQ99661 725 aa23.07■■□□□ 1.28
SNAPC3-204ENST00000461041 SLC26A6Q9BXS9 759 aa23.07■■□□□ 1.28
SNAPC3-204ENST00000461041 RNF26Q9BY78 433 aaPredicted RBP23.07■■□□□ 1.28
SNAPC3-204ENST00000461041 WDR11Q9BZH6 1224 aa23.07■■□□□ 1.28
SNAPC3-204ENST00000461041 UPF3AQ9H1J1 476 aaKnown RBP23.07■■□□□ 1.28
SNAPC3-204ENST00000461041 BARHL2Q9NY43 387 aa23.07■■□□□ 1.28
SNAPC3-204ENST00000461041 CPLX1O14810 134 aa23.06■■□□□ 1.28
SNAPC3-204ENST00000461041 GJA9P57773 515 aa23.06■■□□□ 1.28
SNAPC3-204ENST00000461041 IL31RAQ8NI17 732 aa23.06■■□□□ 1.28
SNAPC3-204ENST00000461041 SCFD2Q8WU76 684 aa23.06■■□□□ 1.28
SNAPC3-204ENST00000461041 SLKQ9H2G2 1235 aaPredicted RBP23.06■■□□□ 1.28
SNAPC3-204ENST00000461041 SPC25Q9HBM1 224 aa23.06■■□□□ 1.28
SNAPC3-204ENST00000461041 MYADML2A6NDP7 307 aa23.05■■□□□ 1.28
SNAPC3-204ENST00000461041 PFKFB2O60825 505 aa23.05■■□□□ 1.28
SNAPC3-204ENST00000461041 MYCLP12524 364 aaPredicted RBP23.05■■□□□ 1.28
SNAPC3-204ENST00000461041 PTGS1P23219 599 aa23.05■■□□□ 1.28
SNAPC3-204ENST00000461041 IRX5P78411 483 aaPredicted RBP23.05■■□□□ 1.28
SNAPC3-204ENST00000461041 SCRN1Q12765 414 aa23.05■■□□□ 1.28
SNAPC3-204ENST00000461041 UBE2SQ16763 222 aa23.05■■□□□ 1.28
SNAPC3-204ENST00000461041 DUSP28Q4G0W2 176 aa23.05■■□□□ 1.28
SNAPC3-204ENST00000461041 TLK2Q86UE8 772 aa23.05■■□□□ 1.28
SNAPC3-204ENST00000461041 KLHDC9Q8NEP7 349 aa23.05■■□□□ 1.28
SNAPC3-204ENST00000461041 SENP6Q9GZR1 1112 aaPredicted RBP23.05■■□□□ 1.28
SNAPC3-204ENST00000461041 UPF2Q9HAU5 1272 aaKnown RBP23.05■■□□□ 1.28
SNAPC3-204ENST00000461041 FRMPD4Q14CM0 1322 aa23.05■■□□□ 1.28
SNAPC3-204ENST00000461041 TNRC18O15417 2968 aaPredicted RBP23.04■■□□□ 1.28
SNAPC3-204ENST00000461041 EIF3JO75822 258 aaKnown RBP23.04■■□□□ 1.28
SNAPC3-204ENST00000461041 C6orf222P0C671 652 aaPredicted RBP23.04■■□□□ 1.28
SNAPC3-204ENST00000461041 CST5P28325 142 aaPredicted RBP23.04■■□□□ 1.28
SNAPC3-204ENST00000461041 CCND2P30279 289 aa23.04■■□□□ 1.28
SNAPC3-204ENST00000461041 SSRP1Q08945 709 aaKnown RBP23.04■■□□□ 1.28
SNAPC3-204ENST00000461041 CPLX2Q6PUV4 134 aaKnown RBP23.04■■□□□ 1.28
SNAPC3-204ENST00000461041 SEPT14Q6ZU15 432 aa23.04■■□□□ 1.28
SNAPC3-204ENST00000461041 VSIG10LQ86VR7 867 aa23.04■■□□□ 1.28
SNAPC3-204ENST00000461041 RIC8AQ9NPQ8 531 aa23.04■■□□□ 1.28
SNAPC3-204ENST00000461041 PHF24Q9UPV7 400 aa23.04■■□□□ 1.28
SNAPC3-204ENST00000461041 Q9Y3F1 56 aa23.04■■□□□ 1.28
SNAPC3-204ENST00000461041 SMCO2A6NFE2 343 aa23.03■■□□□ 1.28
SNAPC3-204ENST00000461041 CTAGE5O15320 804 aa23.03■■□□□ 1.28
SNAPC3-204ENST00000461041 DYNC1LI2O43237 492 aaPredicted RBP23.03■■□□□ 1.28
SNAPC3-204ENST00000461041 ADCY7P51828 1080 aa23.03■■□□□ 1.28
SNAPC3-204ENST00000461041 NKX3-2P78367 333 aa23.03■■□□□ 1.28
SNAPC3-204ENST00000461041 TTLL4Q14679 1199 aa23.03■■□□□ 1.28
SNAPC3-204ENST00000461041 CCSAPQ6IQ19 270 aaPredicted RBP23.03■■□□□ 1.28
SNAPC3-204ENST00000461041 TRIM22Q8IYM9 498 aa23.03■■□□□ 1.28
SNAPC3-204ENST00000461041 DPF3Q92784 378 aa23.03■■□□□ 1.28
SNAPC3-204ENST00000461041 TSEN34Q9BSV6 310 aaKnown RBP23.03■■□□□ 1.28
SNAPC3-204ENST00000461041 AP5M1Q9H0R1 490 aa23.03■■□□□ 1.28
SNAPC3-204ENST00000461041 KIAA1217Q5T5P2 1943 aa23.02■■□□□ 1.28
SNAPC3-204ENST00000461041 ARIH2O95376 493 aa23.02■■□□□ 1.28
SNAPC3-204ENST00000461041 TXNP10599 105 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms