RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 COL11A1P12107 1806 aaPredicted RBP14.06□□□□□ -0.16
HDAC4-206ENST00000460235 OPLAHO14841 1288 aa14.06□□□□□ -0.16
HDAC4-206ENST00000460235 MAFGO15525 162 aa14.06□□□□□ -0.16
HDAC4-206ENST00000460235 SREBF1P36956 1147 aa14.06□□□□□ -0.16
HDAC4-206ENST00000460235 IRF5Q13568 498 aa14.06□□□□□ -0.16
HDAC4-206ENST00000460235 UBE2SQ16763 222 aa14.06□□□□□ -0.16
HDAC4-206ENST00000460235 MORN1Q5T089 497 aa14.06□□□□□ -0.16
HDAC4-206ENST00000460235 KCNV1Q6PIU1 500 aa14.06□□□□□ -0.16
HDAC4-206ENST00000460235 MOXD1Q6UVY6 613 aa14.06□□□□□ -0.16
HDAC4-206ENST00000460235 PIK3AP1Q6ZUJ8 805 aa14.06□□□□□ -0.16
HDAC4-206ENST00000460235 NEK8Q86SG6 692 aa14.06□□□□□ -0.16
HDAC4-206ENST00000460235 NLRX1Q86UT6 975 aa14.06□□□□□ -0.16
HDAC4-206ENST00000460235 PXMP2Q9NR77 195 aa14.06□□□□□ -0.16
HDAC4-206ENST00000460235 SRRDQ9UH36 339 aa14.06□□□□□ -0.16
HDAC4-206ENST00000460235 CFAP45Q9UL16 551 aa14.06□□□□□ -0.16
HDAC4-206ENST00000460235 EIF3JO75822 258 aaKnown RBP14.05□□□□□ -0.16
HDAC4-206ENST00000460235 CYP3A4P08684 503 aa14.05□□□□□ -0.16
HDAC4-206ENST00000460235 PKN2Q16513 984 aaKnown RBP14.05□□□□□ -0.16
HDAC4-206ENST00000460235 ZNF792Q3KQV3 632 aa14.05□□□□□ -0.16
HDAC4-206ENST00000460235 MFSD14CQ5VZR4 134 aa14.05□□□□□ -0.16
HDAC4-206ENST00000460235 PCNX4Q63HM2 1172 aa14.05□□□□□ -0.16
HDAC4-206ENST00000460235 OLFML2BQ68BL8 750 aa14.05□□□□□ -0.16
HDAC4-206ENST00000460235 SLC30A10Q6XR72 485 aa14.05□□□□□ -0.16
HDAC4-206ENST00000460235 RAET1EQ8TD07 263 aa14.05□□□□□ -0.16
HDAC4-206ENST00000460235 TRIM47Q96LD4 638 aa14.05□□□□□ -0.16
HDAC4-206ENST00000460235 R3HDMLQ9H3Y0 253 aa14.05□□□□□ -0.16
HDAC4-206ENST00000460235 NRBP1Q9UHY1 535 aa14.05□□□□□ -0.16
HDAC4-206ENST00000460235 CNPY2Q9Y2B0 182 aa14.05□□□□□ -0.16
HDAC4-206ENST00000460235 M0R2N6 131 aa14.04□□□□□ -0.16
HDAC4-206ENST00000460235 MARCH6O60337 910 aa14.04□□□□□ -0.16
HDAC4-206ENST00000460235 PEX10O60683 326 aa14.04□□□□□ -0.16
HDAC4-206ENST00000460235 BAG4O95429 457 aaKnown RBP14.04□□□□□ -0.16
HDAC4-206ENST00000460235 BRD1O95696 1058 aa14.04□□□□□ -0.16
HDAC4-206ENST00000460235 F13A1P00488 732 aa14.04□□□□□ -0.16
HDAC4-206ENST00000460235 NR3C2P08235 984 aa14.04□□□□□ -0.16
HDAC4-206ENST00000460235 ALDH5A1P51649 535 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-206ENST00000460235 ARHGAP4P98171 946 aa14.04□□□□□ -0.16
HDAC4-206ENST00000460235 SETQ01105 290 aaPredicted RBP14.04□□□□□ -0.16
HDAC4-206ENST00000460235 NR5A1Q13285 461 aa14.04□□□□□ -0.16
HDAC4-206ENST00000460235 CSPP1Q1MSJ5 1256 aa14.04□□□□□ -0.16
HDAC4-206ENST00000460235 MAMDC4Q6UXC1 1216 aa14.04□□□□□ -0.16
HDAC4-206ENST00000460235 NIPA1Q7RTP0 329 aa14.04□□□□□ -0.16
HDAC4-206ENST00000460235 CD99L2Q8TCZ2 262 aa14.04□□□□□ -0.16
HDAC4-206ENST00000460235 TBCKQ8TEA7 893 aa14.04□□□□□ -0.16
HDAC4-206ENST00000460235 TBC1D5Q92609 795 aa14.04□□□□□ -0.16
HDAC4-206ENST00000460235 TAAR1Q96RJ0 339 aa14.04□□□□□ -0.16
HDAC4-206ENST00000460235 PDCD2LQ9BRP1 358 aa14.04□□□□□ -0.16
HDAC4-206ENST00000460235 GJB4Q9NTQ9 266 aa14.04□□□□□ -0.16
HDAC4-206ENST00000460235 TCEAL9Q9UHQ7 104 aa14.04□□□□□ -0.16
HDAC4-206ENST00000460235 SYNGAP1Q96PV0 1343 aa14.04□□□□□ -0.16
HDAC4-206ENST00000460235 LAD1O00515 517 aa14.03□□□□□ -0.16
HDAC4-206ENST00000460235 PGK2P07205 417 aa14.03□□□□□ -0.16
HDAC4-206ENST00000460235 EIF2AK2P19525 551 aaKnown RBP14.03□□□□□ -0.16
HDAC4-206ENST00000460235 CYP2B6P20813 491 aa14.03□□□□□ -0.16
HDAC4-206ENST00000460235 FLT3LGP49771 235 aa14.03□□□□□ -0.16
HDAC4-206ENST00000460235 PGM5Q15124 567 aa14.03□□□□□ -0.16
HDAC4-206ENST00000460235 NPY5RQ15761 445 aa14.03□□□□□ -0.16
HDAC4-206ENST00000460235 PPP4R3AQ6IN85 833 aa14.03□□□□□ -0.16
HDAC4-206ENST00000460235 VSIG10LQ86VR7 867 aa14.03□□□□□ -0.16
HDAC4-206ENST00000460235 GIMAP8Q8ND71 665 aaPredicted RBP14.03□□□□□ -0.16
HDAC4-206ENST00000460235 OXER1Q8TDS5 423 aa14.03□□□□□ -0.16
HDAC4-206ENST00000460235 PXYLP1Q8TE99 480 aa14.03□□□□□ -0.16
HDAC4-206ENST00000460235 USP6NLQ92738 828 aa14.03□□□□□ -0.16
HDAC4-206ENST00000460235 MAML3Q96JK9 1138 aa14.03□□□□□ -0.16
HDAC4-206ENST00000460235 TINF2Q9BSI4 451 aa14.03□□□□□ -0.16
HDAC4-206ENST00000460235 ABHD16BQ9H3Z7 469 aa14.03□□□□□ -0.16
HDAC4-206ENST00000460235 VTA1Q9NP79 307 aa14.03□□□□□ -0.16
HDAC4-206ENST00000460235 TMEM260Q9NX78 707 aa14.03□□□□□ -0.16
HDAC4-206ENST00000460235 GJD2Q9UKL4 321 aa14.03□□□□□ -0.16
HDAC4-206ENST00000460235 FRMPD4Q14CM0 1322 aa14.03□□□□□ -0.16
HDAC4-206ENST00000460235 RPTORQ8N122 1335 aa14.03□□□□□ -0.16
HDAC4-206ENST00000460235 DTNBO60941 627 aa14.02□□□□□ -0.17
HDAC4-206ENST00000460235 COBLO75128 1261 aa14.02□□□□□ -0.17
HDAC4-206ENST00000460235 HSPA1AP0DMV8 641 aaKnown RBP14.02□□□□□ -0.17
HDAC4-206ENST00000460235 HSPA1BP0DMV9 641 aaKnown RBP14.02□□□□□ -0.17
HDAC4-206ENST00000460235 TGFB3P10600 412 aa14.02□□□□□ -0.17
HDAC4-206ENST00000460235 MYCLP12524 364 aaPredicted RBP14.02□□□□□ -0.17
HDAC4-206ENST00000460235 TAL1P17542 331 aaPredicted RBP14.02□□□□□ -0.17
HDAC4-206ENST00000460235 CIITAP33076 1130 aa14.02□□□□□ -0.17
HDAC4-206ENST00000460235 CNTN2Q02246 1040 aa14.02□□□□□ -0.17
HDAC4-206ENST00000460235 INF2Q27J81 1249 aa14.02□□□□□ -0.17
HDAC4-206ENST00000460235 LETM2Q2VYF4 491 aa14.02□□□□□ -0.17
HDAC4-206ENST00000460235 CEP55Q53EZ4 464 aa14.02□□□□□ -0.17
HDAC4-206ENST00000460235 MYSM1Q5VVJ2 828 aa14.02□□□□□ -0.17
HDAC4-206ENST00000460235 FERMT3Q86UX7 667 aa14.02□□□□□ -0.17
HDAC4-206ENST00000460235 SLAIN1Q8ND83 568 aa14.02□□□□□ -0.17
HDAC4-206ENST00000460235 RASGRP4Q8TDF6 673 aa14.02□□□□□ -0.17
HDAC4-206ENST00000460235 MORC4Q8TE76 937 aa14.02□□□□□ -0.17
HDAC4-206ENST00000460235 TNFRSF25Q93038 417 aa14.02□□□□□ -0.17
HDAC4-206ENST00000460235 GPRASP2Q96D09 838 aa14.02□□□□□ -0.17
HDAC4-206ENST00000460235 TRIM17Q9Y577 477 aa14.02□□□□□ -0.17
HDAC4-206ENST00000460235 CYP3A7-CYP3A51PA0A087WV96 503 aa14.01□□□□□ -0.17
HDAC4-206ENST00000460235 SOWAHBA6NEL2 793 aa14.01□□□□□ -0.17
HDAC4-206ENST00000460235 TBX3O15119 743 aa14.01□□□□□ -0.17
HDAC4-206ENST00000460235 CCNT1O60563 726 aaKnown RBP14.01□□□□□ -0.17
HDAC4-206ENST00000460235 CYP3A7P24462 503 aa14.01□□□□□ -0.17
HDAC4-206ENST00000460235 EDNRBP24530 442 aa14.01□□□□□ -0.17
HDAC4-206ENST00000460235 DDIT3P35638 169 aa14.01□□□□□ -0.17
HDAC4-206ENST00000460235 KRT85P78386 507 aa14.01□□□□□ -0.17
HDAC4-206ENST00000460235 RESTQ13127 1097 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms