RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 UAP1Q16222 522 aaPredicted RBP16.21■□□□□ 0.18
PTPRU-205ENST00000460170 XKR9Q5GH70 373 aa16.21■□□□□ 0.18
PTPRU-205ENST00000460170 OXER1Q8TDS5 423 aa16.21■□□□□ 0.18
PTPRU-205ENST00000460170 RIPOR2Q9Y4F9 1068 aa16.21■□□□□ 0.18
PTPRU-205ENST00000460170 CD19P15391 556 aa16.2■□□□□ 0.18
PTPRU-205ENST00000460170 IL25Q9H293 177 aa16.2■□□□□ 0.18
PTPRU-205ENST00000460170 ZNF609O15014 1411 aa16.2■□□□□ 0.18
PTPRU-205ENST00000460170 ZC3H13Q5T200 1668 aaKnown RBP16.2■□□□□ 0.18
PTPRU-205ENST00000460170 PFKFB3Q16875 520 aaPredicted RBP16.2■□□□□ 0.18
PTPRU-205ENST00000460170 LRCH2Q5VUJ6 765 aa16.2■□□□□ 0.18
PTPRU-205ENST00000460170 MCF2L2Q86YR7 1114 aa16.2■□□□□ 0.18
PTPRU-205ENST00000460170 PPM1EQ8WY54 764 aa16.2■□□□□ 0.18
PTPRU-205ENST00000460170 CLEC11AQ9Y240 323 aa16.2■□□□□ 0.18
PTPRU-205ENST00000460170 ADGRB1O14514 1584 aa16.2■□□□□ 0.18
PTPRU-205ENST00000460170 PPFIA4O75335 1185 aa16.2■□□□□ 0.18
PTPRU-205ENST00000460170 CYP2D6P10635 497 aa16.2■□□□□ 0.18
PTPRU-205ENST00000460170 FERP16591 822 aa16.2■□□□□ 0.18
PTPRU-205ENST00000460170 GNGT1P63211 74 aa16.2■□□□□ 0.18
PTPRU-205ENST00000460170 PARD6BQ9BYG5 372 aa16.2■□□□□ 0.18
PTPRU-205ENST00000460170 GDAQ9Y2T3 454 aa16.2■□□□□ 0.18
PTPRU-205ENST00000460170 PIK3C2BO00750 1634 aa16.19■□□□□ 0.18
PTPRU-205ENST00000460170 E7EVH7 732 aa16.19■□□□□ 0.18
PTPRU-205ENST00000460170 SPICE1Q8N0Z3 855 aa16.19■□□□□ 0.18
PTPRU-205ENST00000460170 HINFPQ9BQA5 517 aa16.19■□□□□ 0.18
PTPRU-205ENST00000460170 CLCN6P51797 869 aa16.19■□□□□ 0.18
PTPRU-205ENST00000460170 GUCY2DQ02846 1103 aa16.19■□□□□ 0.18
PTPRU-205ENST00000460170 PSMD2Q13200 908 aa16.19■□□□□ 0.18
PTPRU-205ENST00000460170 GNPTABQ3T906 1256 aa16.19■□□□□ 0.18
PTPRU-205ENST00000460170 FAM182BQ5T319 152 aa16.19■□□□□ 0.18
PTPRU-205ENST00000460170 ARMCX5Q6P1M9 558 aa16.19■□□□□ 0.18
PTPRU-205ENST00000460170 PAXIP1Q6ZW49 1069 aaPredicted RBP16.19■□□□□ 0.18
PTPRU-205ENST00000460170 HOXA7P31268 230 aaPredicted RBP16.19■□□□□ 0.18
PTPRU-205ENST00000460170 CUL4BQ13620 913 aa16.19■□□□□ 0.18
PTPRU-205ENST00000460170 ARHGEF16Q5VV41 709 aa16.19■□□□□ 0.18
PTPRU-205ENST00000460170 MRRFQ96E11 262 aaKnown RBP16.19■□□□□ 0.18
PTPRU-205ENST00000460170 RPS6KA4O75676 772 aa16.19■□□□□ 0.18
PTPRU-205ENST00000460170 CACNB1Q02641 598 aaPredicted RBP16.19■□□□□ 0.18
PTPRU-205ENST00000460170 SEPT2Q15019 361 aa16.19■□□□□ 0.18
PTPRU-205ENST00000460170 SMCR8Q8TEV9 937 aaPredicted RBP16.19■□□□□ 0.18
PTPRU-205ENST00000460170 FAM204AQ9H8W3 233 aa16.19■□□□□ 0.18
PTPRU-205ENST00000460170 NHEJ1Q9H9Q4 299 aaPredicted RBP16.19■□□□□ 0.18
PTPRU-205ENST00000460170 FAM169AQ9Y6X4 670 aa16.19■□□□□ 0.18
PTPRU-205ENST00000460170 LACTBP83111 547 aaPredicted RBP16.18■□□□□ 0.18
PTPRU-205ENST00000460170 PPM1KQ8N3J5 372 aa16.18■□□□□ 0.18
PTPRU-205ENST00000460170 DEPTORQ8TB45 409 aa16.18■□□□□ 0.18
PTPRU-205ENST00000460170 CSRNP1Q96S65 589 aa16.18■□□□□ 0.18
PTPRU-205ENST00000460170 DCP1AQ9NPI6 582 aaPredicted RBP16.18■□□□□ 0.18
PTPRU-205ENST00000460170 CPDO75976 1380 aa16.18■□□□□ 0.18
PTPRU-205ENST00000460170 KIF28PB7ZC32 967 aa16.18■□□□□ 0.18
PTPRU-205ENST00000460170 AFPP02771 609 aaKnown RBP16.18■□□□□ 0.18
PTPRU-205ENST00000460170 GAP43P17677 238 aa16.18■□□□□ 0.18
PTPRU-205ENST00000460170 FBXO38Q6PIJ6 1188 aa16.18■□□□□ 0.18
PTPRU-205ENST00000460170 MB21D1Q8N884 522 aa16.18■□□□□ 0.18
PTPRU-205ENST00000460170 TRIM7Q9C029 511 aa16.18■□□□□ 0.18
PTPRU-205ENST00000460170 NDST4Q9H3R1 872 aa16.18■□□□□ 0.18
PTPRU-205ENST00000460170 RGS16O15492 202 aaPredicted RBP16.18■□□□□ 0.18
PTPRU-205ENST00000460170 CASP1P29466 404 aa16.18■□□□□ 0.18
PTPRU-205ENST00000460170 CCDC127Q96BQ5 260 aa16.18■□□□□ 0.18
PTPRU-205ENST00000460170 PLA2G12BQ9BX93 195 aa16.18■□□□□ 0.18
PTPRU-205ENST00000460170 DHX36Q9H2U1 1008 aaKnown RBP16.18■□□□□ 0.18
PTPRU-205ENST00000460170 SHC4Q6S5L8 630 aa16.18■□□□□ 0.18
PTPRU-205ENST00000460170 DHX40Q8IX18 779 aaKnown RBP16.18■□□□□ 0.18
PTPRU-205ENST00000460170 DPH5Q9H2P9 285 aa16.18■□□□□ 0.18
PTPRU-205ENST00000460170 CCPG1Q9ULG6 757 aa16.18■□□□□ 0.18
PTPRU-205ENST00000460170 CHGBP05060 677 aa16.17■□□□□ 0.18
PTPRU-205ENST00000460170 SH3RF3Q8TEJ3 882 aaPredicted RBP16.17■□□□□ 0.18
PTPRU-205ENST00000460170 PPANQ9NQ55 473 aaKnown RBP16.17■□□□□ 0.18
PTPRU-205ENST00000460170 EMILIN3Q9NT22 766 aa16.17■□□□□ 0.18
PTPRU-205ENST00000460170 CEMIPQ8WUJ3 1361 aa16.17■□□□□ 0.18
PTPRU-205ENST00000460170 EIF4A3P38919 411 aaKnown RBP16.17■□□□□ 0.18
PTPRU-205ENST00000460170 LRRC63Q05C16 580 aa16.17■□□□□ 0.18
PTPRU-205ENST00000460170 ZNF354CQ86Y25 554 aa16.17■□□□□ 0.18
PTPRU-205ENST00000460170 CELF1Q92879 486 aaKnown RBP16.17■□□□□ 0.18
PTPRU-205ENST00000460170 CAPS2Q9BXY5 557 aa16.17■□□□□ 0.18
PTPRU-205ENST00000460170 PNMA2Q9UL42 364 aa16.17■□□□□ 0.18
PTPRU-205ENST00000460170 JRKLQ9Y4A0 524 aa16.17■□□□□ 0.18
PTPRU-205ENST00000460170 PNMA6FA0A0J9YX94 578 aa16.17■□□□□ 0.18
PTPRU-205ENST00000460170 CYP27A1Q02318 531 aa16.17■□□□□ 0.18
PTPRU-205ENST00000460170 APBA1Q02410 837 aa16.17■□□□□ 0.18
PTPRU-205ENST00000460170 C1orf112Q9NSG2 853 aa16.17■□□□□ 0.18
PTPRU-205ENST00000460170 BMP3P12645 472 aa16.17■□□□□ 0.18
PTPRU-205ENST00000460170 PSMC2P35998 433 aaKnown RBP16.17■□□□□ 0.18
PTPRU-205ENST00000460170 UBE2SQ16763 222 aa16.17■□□□□ 0.18
PTPRU-205ENST00000460170 FAM186BQ8IYM0 893 aa16.17■□□□□ 0.18
PTPRU-205ENST00000460170 KRT12Q99456 494 aa16.17■□□□□ 0.18
PTPRU-205ENST00000460170 TMEM47Q9BQJ4 181 aa16.17■□□□□ 0.18
PTPRU-205ENST00000460170 LMNB1P20700 586 aa16.16■□□□□ 0.18
PTPRU-205ENST00000460170 ATP1A2P50993 1020 aa16.16■□□□□ 0.18
PTPRU-205ENST00000460170 PRKG1Q13976 671 aa16.16■□□□□ 0.18
PTPRU-205ENST00000460170 PNPLA7Q6ZV29 1317 aa16.16■□□□□ 0.18
PTPRU-205ENST00000460170 LIG4P49917 911 aa16.16■□□□□ 0.18
PTPRU-205ENST00000460170 SLC8A3P57103 927 aa16.16■□□□□ 0.18
PTPRU-205ENST00000460170 CCDC14Q49A88 953 aa16.16■□□□□ 0.18
PTPRU-205ENST00000460170 CC2D2BQ6DHV5 1058 aa16.16■□□□□ 0.18
PTPRU-205ENST00000460170 BCAS4Q8TDM0 211 aa16.16■□□□□ 0.18
PTPRU-205ENST00000460170 DBNDD1Q9H9R9 158 aa16.16■□□□□ 0.18
PTPRU-205ENST00000460170 NARFQ9UHQ1 456 aa16.16■□□□□ 0.18
PTPRU-205ENST00000460170 KIDINS220Q9ULH0 1771 aa16.16■□□□□ 0.18
PTPRU-205ENST00000460170 CLTCQ00610 1675 aaKnown RBP16.16■□□□□ 0.18
PTPRU-205ENST00000460170 H0YCG3 227 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms