RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 RFXAPO00287 272 aa14.47□□□□□ -0.09
GPNMB-204ENST00000459927 GOLGA8HP0CJ92 632 aa14.47□□□□□ -0.09
GPNMB-204ENST00000459927 ACTN1P12814 892 aa14.47□□□□□ -0.09
GPNMB-204ENST00000459927 SDSP20132 328 aa14.47□□□□□ -0.09
GPNMB-204ENST00000459927 POU3F3P20264 500 aaPredicted RBP14.47□□□□□ -0.09
GPNMB-204ENST00000459927 RFC2P35250 354 aa14.47□□□□□ -0.09
GPNMB-204ENST00000459927 PPP2R5BQ15173 497 aa14.47□□□□□ -0.09
GPNMB-204ENST00000459927 FAM47CQ5HY64 1035 aa14.47□□□□□ -0.09
GPNMB-204ENST00000459927 PPP2R2DQ66LE6 453 aa14.47□□□□□ -0.09
GPNMB-204ENST00000459927 CCDC62Q6P9F0 684 aa14.47□□□□□ -0.09
GPNMB-204ENST00000459927 ANKS1AQ92625 1134 aa14.47□□□□□ -0.09
GPNMB-204ENST00000459927 TAAR1Q96RJ0 339 aa14.47□□□□□ -0.09
GPNMB-204ENST00000459927 ZKSCAN3Q9BRR0 538 aa14.47□□□□□ -0.09
GPNMB-204ENST00000459927 GBF1Q92538 1859 aa14.46□□□□□ -0.09
GPNMB-204ENST00000459927 ZMYM6O95789 1325 aa14.46□□□□□ -0.09
GPNMB-204ENST00000459927 PITPNM1O00562 1244 aa14.46□□□□□ -0.09
GPNMB-204ENST00000459927 ZNF213O14771 459 aa14.46□□□□□ -0.09
GPNMB-204ENST00000459927 ARIH2O95376 493 aa14.46□□□□□ -0.09
GPNMB-204ENST00000459927 BMP1P13497 986 aa14.46□□□□□ -0.09
GPNMB-204ENST00000459927 RRP1P56182 461 aaKnown RBP14.46□□□□□ -0.09
GPNMB-204ENST00000459927 GPATCH4Q5T3I0 446 aaKnown RBP14.46□□□□□ -0.09
GPNMB-204ENST00000459927 ESR2Q92731 530 aa14.46□□□□□ -0.09
GPNMB-204ENST00000459927 RILPL2Q969X0 211 aa14.46□□□□□ -0.09
GPNMB-204ENST00000459927 TSPYL2Q9H2G4 693 aaPredicted RBP14.46□□□□□ -0.09
GPNMB-204ENST00000459927 CPVLQ9H3G5 476 aa14.46□□□□□ -0.09
GPNMB-204ENST00000459927 RNF41Q9H4P4 317 aaPredicted RBP14.46□□□□□ -0.09
GPNMB-204ENST00000459927 CCDC171Q6TFL3 1326 aa14.45□□□□□ -0.1
GPNMB-204ENST00000459927 RAD50Q92878 1312 aa14.45□□□□□ -0.1
GPNMB-204ENST00000459927 BFSP2Q13515 415 aa14.45□□□□□ -0.1
GPNMB-204ENST00000459927 LY6KQ17RY6 165 aa14.45□□□□□ -0.1
GPNMB-204ENST00000459927 USH1GQ495M9 461 aa14.45□□□□□ -0.1
GPNMB-204ENST00000459927 CCDC178Q5BJE1 867 aa14.45□□□□□ -0.1
GPNMB-204ENST00000459927 TBC1D10CQ8IV04 446 aa14.45□□□□□ -0.1
GPNMB-204ENST00000459927 ADGRF4Q8IZF3 695 aa14.45□□□□□ -0.1
GPNMB-204ENST00000459927 SYTL5Q8TDW5 730 aaPredicted RBP14.45□□□□□ -0.1
GPNMB-204ENST00000459927 ADAMTS19Q8TE59 1207 aa14.45□□□□□ -0.1
GPNMB-204ENST00000459927 NSUN6Q8TEA1 469 aaKnown RBP14.45□□□□□ -0.1
GPNMB-204ENST00000459927 FTOQ9C0B1 505 aaKnown RBP eCLIP14.45□□□□□ -0.1
GPNMB-204ENST00000459927 ZSWIM5Q9P217 1185 aa14.45□□□□□ -0.1
GPNMB-204ENST00000459927 MTCH2Q9Y6C9 303 aa14.45□□□□□ -0.1
GPNMB-204ENST00000459927 TRIP12Q14669 1992 aaPredicted RBP14.45□□□□□ -0.1
GPNMB-204ENST00000459927 MUC3AQ02505 3323 aa14.44□□□□□ -0.1
GPNMB-204ENST00000459927 SCN5AQ14524 2016 aa14.44□□□□□ -0.1
GPNMB-204ENST00000459927 SCN10AQ9Y5Y9 1956 aa14.44□□□□□ -0.1
GPNMB-204ENST00000459927 KIF28PB7ZC32 967 aa14.44□□□□□ -0.1
GPNMB-204ENST00000459927 CA3P07451 260 aa14.44□□□□□ -0.1
GPNMB-204ENST00000459927 MFAP1P55081 439 aaKnown RBP14.44□□□□□ -0.1
GPNMB-204ENST00000459927 GPNMBQ14956 572 aa14.44□□□□□ -0.1
GPNMB-204ENST00000459927 STXBP2Q15833 593 aa14.44□□□□□ -0.1
GPNMB-204ENST00000459927 PTGISQ16647 500 aa14.44□□□□□ -0.1
GPNMB-204ENST00000459927 SEPT14Q6ZU15 432 aa14.44□□□□□ -0.1
GPNMB-204ENST00000459927 AFG1LQ8WV93 481 aa14.44□□□□□ -0.1
GPNMB-204ENST00000459927 IWS1Q96ST2 819 aa14.44□□□□□ -0.1
GPNMB-204ENST00000459927 SLC9A7Q96T83 725 aa14.44□□□□□ -0.1
GPNMB-204ENST00000459927 LNPKQ9C0E8 428 aa14.44□□□□□ -0.1
GPNMB-204ENST00000459927 CERS4Q9HA82 394 aa14.44□□□□□ -0.1
GPNMB-204ENST00000459927 VAT1LQ9HCJ6 419 aa14.44□□□□□ -0.1
GPNMB-204ENST00000459927 DDX41Q9UJV9 622 aaKnown RBP14.44□□□□□ -0.1
GPNMB-204ENST00000459927 LRRC37A2A6NM11 1700 aa14.44□□□□□ -0.1
GPNMB-204ENST00000459927 KDM4AO75164 1064 aa14.43□□□□□ -0.1
GPNMB-204ENST00000459927 CASTP20810 708 aaKnown RBP14.43□□□□□ -0.1
GPNMB-204ENST00000459927 COL9A1P20849 921 aa14.43□□□□□ -0.1
GPNMB-204ENST00000459927 NT5C2P49902 561 aa14.43□□□□□ -0.1
GPNMB-204ENST00000459927 CHMP4BP1P59074 171 aa14.43□□□□□ -0.1
GPNMB-204ENST00000459927 TAP1Q03518 808 aa14.43□□□□□ -0.1
GPNMB-204ENST00000459927 B4GALNT3Q6L9W6 998 aa14.43□□□□□ -0.1
GPNMB-204ENST00000459927 SESTD1Q86VW0 696 aa14.43□□□□□ -0.1
GPNMB-204ENST00000459927 IQCA1Q86XH1 822 aa14.43□□□□□ -0.1
GPNMB-204ENST00000459927 MCF2L2Q86YR7 1114 aa14.43□□□□□ -0.1
GPNMB-204ENST00000459927 HERC6Q8IVU3 1022 aa14.43□□□□□ -0.1
GPNMB-204ENST00000459927 PLEKHM2Q8IWE5 1019 aa14.43□□□□□ -0.1
GPNMB-204ENST00000459927 PNMA1Q8ND90 353 aa14.43□□□□□ -0.1
GPNMB-204ENST00000459927 TET1Q8NFU7 2136 aa14.43□□□□□ -0.1
GPNMB-204ENST00000459927 KAT2BQ92831 832 aa14.43□□□□□ -0.1
GPNMB-204ENST00000459927 CTAGE1Q96RT6 745 aa14.43□□□□□ -0.1
GPNMB-204ENST00000459927 UHRF1Q96T88 793 aaPredicted RBP14.43□□□□□ -0.1
GPNMB-204ENST00000459927 COL20A1Q9P218 1284 aa14.43□□□□□ -0.1
GPNMB-204ENST00000459927 CHD7Q9P2D1 2997 aa14.43□□□□□ -0.1
GPNMB-204ENST00000459927 NOD1Q9Y239 953 aa14.43□□□□□ -0.1
GPNMB-204ENST00000459927 TCF20Q9UGU0 1960 aaKnown RBP14.43□□□□□ -0.1
GPNMB-204ENST00000459927 ABCB11O95342 1321 aa14.42□□□□□ -0.1
GPNMB-204ENST00000459927 NCOR1O75376 2440 aa14.42□□□□□ -0.1
GPNMB-204ENST00000459927 EIF3JO75822 258 aaKnown RBP14.42□□□□□ -0.1
GPNMB-204ENST00000459927 GH1P01241 217 aa14.42□□□□□ -0.1
GPNMB-204ENST00000459927 TFF2Q03403 129 aa14.42□□□□□ -0.1
GPNMB-204ENST00000459927 ARHGAP1Q07960 439 aa14.42□□□□□ -0.1
GPNMB-204ENST00000459927 CDC37Q16543 378 aaPredicted RBP14.42□□□□□ -0.1
GPNMB-204ENST00000459927 GDF6Q6KF10 455 aaPredicted RBP14.42□□□□□ -0.1
GPNMB-204ENST00000459927 SMC5Q8IY18 1101 aa14.42□□□□□ -0.1
GPNMB-204ENST00000459927 MICALL1Q8N3F8 863 aa14.42□□□□□ -0.1
GPNMB-204ENST00000459927 ZSCAN10Q96SZ4 725 aaPredicted RBP14.42□□□□□ -0.1
GPNMB-204ENST00000459927 RMDN3Q96TC7 470 aa14.42□□□□□ -0.1
GPNMB-204ENST00000459927 RWDD1Q9H446 243 aaPredicted RBP14.42□□□□□ -0.1
GPNMB-204ENST00000459927 OSBPL3Q9H4L5 887 aa14.42□□□□□ -0.1
GPNMB-204ENST00000459927 KAT14Q9H8E8 782 aa14.42□□□□□ -0.1
GPNMB-204ENST00000459927 JMJD4Q9H9V9 463 aa14.42□□□□□ -0.1
GPNMB-204ENST00000459927 MRPL11Q9Y3B7 192 aaKnown RBP14.42□□□□□ -0.1
GPNMB-204ENST00000459927 PRRC2BQ5JSZ5 2229 aaKnown RBP14.42□□□□□ -0.1
GPNMB-204ENST00000459927 NEDD4P46934 1319 aa14.41□□□□□ -0.1
GPNMB-204ENST00000459927 EPOPA6NHQ4 379 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms