RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 OSBP2Q969R2 916 aa13.36□□□□□ -0.27
PRAMEF35P-201ENST00000458709 GMCL1Q96IK5 515 aa13.36□□□□□ -0.27
PRAMEF35P-201ENST00000458709 SUGCTQ9HAC7 445 aa13.36□□□□□ -0.27
PRAMEF35P-201ENST00000458709 GPHNQ9NQX3 736 aaPredicted RBP13.36□□□□□ -0.27
PRAMEF35P-201ENST00000458709 LMCD1Q9NZU5 365 aa13.36□□□□□ -0.27
PRAMEF35P-201ENST00000458709 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.35□□□□□ -0.27
PRAMEF35P-201ENST00000458709 TSPY3P0CV98 308 aa13.35□□□□□ -0.27
PRAMEF35P-201ENST00000458709 TSPY8P0CW00 308 aa13.35□□□□□ -0.27
PRAMEF35P-201ENST00000458709 TDO2P48775 406 aa13.35□□□□□ -0.27
PRAMEF35P-201ENST00000458709 ALDH5A1P51649 535 aaPredicted RBP13.35□□□□□ -0.27
PRAMEF35P-201ENST00000458709 PLCB2Q00722 1185 aa13.35□□□□□ -0.27
PRAMEF35P-201ENST00000458709 BFSP2Q13515 415 aa13.35□□□□□ -0.27
PRAMEF35P-201ENST00000458709 GPNMBQ14956 572 aa13.35□□□□□ -0.27
PRAMEF35P-201ENST00000458709 NFRKBQ6P4R8 1299 aa13.35□□□□□ -0.27
PRAMEF35P-201ENST00000458709 NEDD1Q8NHV4 660 aa13.35□□□□□ -0.27
PRAMEF35P-201ENST00000458709 COPS5Q92905 334 aa13.35□□□□□ -0.27
PRAMEF35P-201ENST00000458709 ZBED2Q9BTP6 218 aa13.35□□□□□ -0.27
PRAMEF35P-201ENST00000458709 LRRCC1Q9C099 1032 aa13.35□□□□□ -0.27
PRAMEF35P-201ENST00000458709 CCPG1Q9ULG6 757 aa13.35□□□□□ -0.27
PRAMEF35P-201ENST00000458709 PRR12Q9ULL5 1215 aa13.35□□□□□ -0.27
PRAMEF35P-201ENST00000458709 RBM47A0AV96 593 aaKnown RBP13.34□□□□□ -0.27
PRAMEF35P-201ENST00000458709 BAATQ14032 418 aaPredicted RBP13.34□□□□□ -0.27
PRAMEF35P-201ENST00000458709 TCTN1Q2MV58 587 aa13.34□□□□□ -0.27
PRAMEF35P-201ENST00000458709 PTCRAQ6ISU1 281 aaPredicted RBP13.34□□□□□ -0.27
PRAMEF35P-201ENST00000458709 SNX27Q96L92 541 aa13.34□□□□□ -0.27
PRAMEF35P-201ENST00000458709 FBXL18Q96ME1 805 aa13.34□□□□□ -0.27
PRAMEF35P-201ENST00000458709 CTAGE1Q96RT6 745 aa13.34□□□□□ -0.27
PRAMEF35P-201ENST00000458709 ZNF287Q9HBT7 754 aa13.34□□□□□ -0.27
PRAMEF35P-201ENST00000458709 NOD1Q9Y239 953 aa13.34□□□□□ -0.27
PRAMEF35P-201ENST00000458709 LINC01553A4QN01 128 aa13.33□□□□□ -0.28
PRAMEF35P-201ENST00000458709 NFIBO00712 420 aa13.33□□□□□ -0.28
PRAMEF35P-201ENST00000458709 GPAA1O43292 621 aa13.33□□□□□ -0.28
PRAMEF35P-201ENST00000458709 PLA2G6O60733 806 aa13.33□□□□□ -0.28
PRAMEF35P-201ENST00000458709 ALADP13716 330 aa13.33□□□□□ -0.28
PRAMEF35P-201ENST00000458709 CHMP4BP1P59074 171 aa13.33□□□□□ -0.28
PRAMEF35P-201ENST00000458709 ERVK-21P61565 698 aa13.33□□□□□ -0.28
PRAMEF35P-201ENST00000458709 TFAP4Q01664 338 aa13.33□□□□□ -0.28
PRAMEF35P-201ENST00000458709 PTPN11Q06124 597 aaPredicted RBP13.33□□□□□ -0.28
PRAMEF35P-201ENST00000458709 PPP2R5BQ15173 497 aa13.33□□□□□ -0.28
PRAMEF35P-201ENST00000458709 CSPP1Q1MSJ5 1256 aa13.33□□□□□ -0.28
PRAMEF35P-201ENST00000458709 LRRFIP1Q32MZ4 808 aaKnown RBP13.33□□□□□ -0.28
PRAMEF35P-201ENST00000458709 SLC30A10Q6XR72 485 aa13.33□□□□□ -0.28
PRAMEF35P-201ENST00000458709 APPBP2Q92624 585 aa13.33□□□□□ -0.28
PRAMEF35P-201ENST00000458709 TGS1Q96RS0 853 aaKnown RBP13.33□□□□□ -0.28
PRAMEF35P-201ENST00000458709 GRXCR2A6NFK2 248 aa13.32□□□□□ -0.28
PRAMEF35P-201ENST00000458709 A6NJR5 290 aa13.32□□□□□ -0.28
PRAMEF35P-201ENST00000458709 M0R2C6 588 aa13.32□□□□□ -0.28
PRAMEF35P-201ENST00000458709 DCXO43602 365 aa13.32□□□□□ -0.28
PRAMEF35P-201ENST00000458709 GJB5O95377 273 aa13.32□□□□□ -0.28
PRAMEF35P-201ENST00000458709 APPP05067 770 aa13.32□□□□□ -0.28
PRAMEF35P-201ENST00000458709 ICAM1P05362 532 aa13.32□□□□□ -0.28
PRAMEF35P-201ENST00000458709 PTGISQ16647 500 aa13.32□□□□□ -0.28
PRAMEF35P-201ENST00000458709 BRDTQ58F21 947 aaPredicted RBP13.32□□□□□ -0.28
PRAMEF35P-201ENST00000458709 FAM117BQ6P1L5 589 aa13.32□□□□□ -0.28
PRAMEF35P-201ENST00000458709 DHX38Q92620 1227 aaKnown RBP13.32□□□□□ -0.28
PRAMEF35P-201ENST00000458709 ANKS1AQ92625 1134 aa13.32□□□□□ -0.28
PRAMEF35P-201ENST00000458709 RAD9AQ99638 391 aa13.32□□□□□ -0.28
PRAMEF35P-201ENST00000458709 OSBPL3Q9H4L5 887 aa13.32□□□□□ -0.28
PRAMEF35P-201ENST00000458709 ADD3Q9UEY8 706 aaKnown RBP13.32□□□□□ -0.28
PRAMEF35P-201ENST00000458709 MTMR7Q9Y216 660 aa13.32□□□□□ -0.28
PRAMEF35P-201ENST00000458709 RAD50Q92878 1312 aa13.32□□□□□ -0.28
PRAMEF35P-201ENST00000458709 WDFY4Q6ZS81 3184 aa13.31□□□□□ -0.28
PRAMEF35P-201ENST00000458709 PTPDC1A2A3K4 754 aa13.31□□□□□ -0.28
PRAMEF35P-201ENST00000458709 H3BQ06 376 aaPredicted RBP13.31□□□□□ -0.28
PRAMEF35P-201ENST00000458709 NMT2O60551 498 aa13.31□□□□□ -0.28
PRAMEF35P-201ENST00000458709 NBNO60934 754 aa13.31□□□□□ -0.28
PRAMEF35P-201ENST00000458709 SELPP16109 830 aa13.31□□□□□ -0.28
PRAMEF35P-201ENST00000458709 RCSD1Q6JBY9 416 aa13.31□□□□□ -0.28
PRAMEF35P-201ENST00000458709 GDF6Q6KF10 455 aaPredicted RBP13.31□□□□□ -0.28
PRAMEF35P-201ENST00000458709 CNKSR3Q6P9H4 555 aa13.31□□□□□ -0.28
PRAMEF35P-201ENST00000458709 LRRC8DQ7L1W4 858 aa13.31□□□□□ -0.28
PRAMEF35P-201ENST00000458709 CHD1LQ86WJ1 897 aa13.31□□□□□ -0.28
PRAMEF35P-201ENST00000458709 TICAM2Q86XR7 235 aa13.31□□□□□ -0.28
PRAMEF35P-201ENST00000458709 CCDC155Q8N6L0 562 aa13.31□□□□□ -0.28
PRAMEF35P-201ENST00000458709 KBTBD3Q8NAB2 608 aa13.31□□□□□ -0.28
PRAMEF35P-201ENST00000458709 CAGE1Q8TC20 777 aa13.31□□□□□ -0.28
PRAMEF35P-201ENST00000458709 AFAP1L1Q8TED9 768 aa13.31□□□□□ -0.28
PRAMEF35P-201ENST00000458709 CCDC136Q96JN2 1154 aa13.31□□□□□ -0.28
PRAMEF35P-201ENST00000458709 C17orf80Q9BSJ5 609 aa13.31□□□□□ -0.28
PRAMEF35P-201ENST00000458709 STX8Q9UNK0 236 aa13.31□□□□□ -0.28
PRAMEF35P-201ENST00000458709 SIP14410 1827 aa13.31□□□□□ -0.28
PRAMEF35P-201ENST00000458709 NKRFO15226 690 aaKnown RBP eCLIP13.3□□□□□ -0.28
PRAMEF35P-201ENST00000458709 SMARCA5O60264 1052 aaPredicted RBP13.3□□□□□ -0.28
PRAMEF35P-201ENST00000458709 KPNA6O60684 536 aa13.3□□□□□ -0.28
PRAMEF35P-201ENST00000458709 ARIH2O95376 493 aa13.3□□□□□ -0.28
PRAMEF35P-201ENST00000458709 CXCL10P02778 98 aa13.3□□□□□ -0.28
PRAMEF35P-201ENST00000458709 CALML3P27482 149 aa13.3□□□□□ -0.28
PRAMEF35P-201ENST00000458709 SLC16A2P36021 539 aa13.3□□□□□ -0.28
PRAMEF35P-201ENST00000458709 PDE4BQ07343 736 aa13.3□□□□□ -0.28
PRAMEF35P-201ENST00000458709 PDE4DQ08499 809 aa13.3□□□□□ -0.28
PRAMEF35P-201ENST00000458709 CCDC96Q2M329 555 aa13.3□□□□□ -0.28
PRAMEF35P-201ENST00000458709 TTBK2Q6IQ55 1244 aa13.3□□□□□ -0.28
PRAMEF35P-201ENST00000458709 IFNL3Q8IZI9 196 aa13.3□□□□□ -0.28
PRAMEF35P-201ENST00000458709 NEK9Q8TD19 979 aa13.3□□□□□ -0.28
PRAMEF35P-201ENST00000458709 SCFD2Q8WU76 684 aa13.3□□□□□ -0.28
PRAMEF35P-201ENST00000458709 RANBP17Q9H2T7 1088 aaKnown RBP13.3□□□□□ -0.28
PRAMEF35P-201ENST00000458709 IL17RBQ9NRM6 502 aa13.3□□□□□ -0.28
PRAMEF35P-201ENST00000458709 TTC41PQ6P2S7 1318 aa13.3□□□□□ -0.28
PRAMEF35P-201ENST00000458709 LOC102724159A0A0B4J2E5 919 aa13.29□□□□□ -0.28
PRAMEF35P-201ENST00000458709 POTEB3A0JP26 581 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms