RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 PITPNM1O00562 1244 aa25.2■■□□□ 1.62
CPNE1-220ENST00000458038 TXNP10599 105 aaKnown RBP25.2■■□□□ 1.62
CPNE1-220ENST00000458038 ACTN1P12814 892 aa25.2■■□□□ 1.62
CPNE1-220ENST00000458038 CHD1LQ86WJ1 897 aa25.2■■□□□ 1.62
CPNE1-220ENST00000458038 PNMA1Q8ND90 353 aa25.2■■□□□ 1.62
CPNE1-220ENST00000458038 ATXN2LQ8WWM7 1075 aaKnown RBP25.2■■□□□ 1.62
CPNE1-220ENST00000458038 SCLYQ96I15 445 aa25.2■■□□□ 1.62
CPNE1-220ENST00000458038 NKX2-4Q9H2Z4 354 aa25.2■■□□□ 1.62
CPNE1-220ENST00000458038 KAT14Q9H8E8 782 aa25.2■■□□□ 1.62
CPNE1-220ENST00000458038 LAMA4Q16363 1823 aa25.19■■□□□ 1.62
CPNE1-220ENST00000458038 ABCB11O95342 1321 aa25.19■■□□□ 1.62
CPNE1-220ENST00000458038 NEDD4P46934 1319 aa25.19■■□□□ 1.62
CPNE1-220ENST00000458038 TRANK1O15050 2925 aa25.19■■□□□ 1.62
CPNE1-220ENST00000458038 ASPRV1Q53RT3 343 aa25.19■■□□□ 1.62
CPNE1-220ENST00000458038 MCF2L2Q86YR7 1114 aa25.19■■□□□ 1.62
CPNE1-220ENST00000458038 PLEKHM2Q8IWE5 1019 aa25.19■■□□□ 1.62
CPNE1-220ENST00000458038 DIAPH3Q9NSV4 1193 aa25.19■■□□□ 1.62
CPNE1-220ENST00000458038 MYH6P13533 1939 aa25.19■■□□□ 1.62
CPNE1-220ENST00000458038 ZBBXA8MT70 800 aa25.18■■□□□ 1.62
CPNE1-220ENST00000458038 GOLGA8HP0CJ92 632 aa25.18■■□□□ 1.62
CPNE1-220ENST00000458038 CYP2C9P11712 490 aa25.18■■□□□ 1.62
CPNE1-220ENST00000458038 ATP2A2P16615 1042 aaKnown RBP25.18■■□□□ 1.62
CPNE1-220ENST00000458038 USH1GQ495M9 461 aa25.18■■□□□ 1.62
CPNE1-220ENST00000458038 FAM47CQ5HY64 1035 aa25.18■■□□□ 1.62
CPNE1-220ENST00000458038 RETREG2Q8NC44 543 aa25.18■■□□□ 1.62
CPNE1-220ENST00000458038 NSUN6Q8TEA1 469 aaKnown RBP25.18■■□□□ 1.62
CPNE1-220ENST00000458038 IWS1Q96ST2 819 aa25.18■■□□□ 1.62
CPNE1-220ENST00000458038 ZKSCAN3Q9BRR0 538 aa25.18■■□□□ 1.62
CPNE1-220ENST00000458038 CTNNA3Q9UI47 895 aa25.18■■□□□ 1.62
CPNE1-220ENST00000458038 YBX2Q9Y2T7 364 aaKnown RBP25.18■■□□□ 1.62
CPNE1-220ENST00000458038 KDM4AO75164 1064 aa25.17■■□□□ 1.62
CPNE1-220ENST00000458038 NUCB1Q02818 461 aa25.17■■□□□ 1.62
CPNE1-220ENST00000458038 BFSP2Q13515 415 aa25.17■■□□□ 1.62
CPNE1-220ENST00000458038 B4GALNT3Q6L9W6 998 aa25.17■■□□□ 1.62
CPNE1-220ENST00000458038 VWCEQ96DN2 955 aa25.17■■□□□ 1.62
CPNE1-220ENST00000458038 ZSCAN10Q96SZ4 725 aaPredicted RBP25.17■■□□□ 1.62
CPNE1-220ENST00000458038 DSCC1Q9BVC3 393 aa25.17■■□□□ 1.62
CPNE1-220ENST00000458038 UBA5Q9GZZ9 404 aa25.17■■□□□ 1.62
CPNE1-220ENST00000458038 IGFBP4P22692 258 aa25.16■■□□□ 1.62
CPNE1-220ENST00000458038 CDC37Q16543 378 aaPredicted RBP25.16■■□□□ 1.62
CPNE1-220ENST00000458038 IMMTQ16891 758 aaKnown RBP25.16■■□□□ 1.62
CPNE1-220ENST00000458038 CCDC62Q6P9F0 684 aa25.16■■□□□ 1.62
CPNE1-220ENST00000458038 CWC27Q6UX04 472 aaKnown RBP25.16■■□□□ 1.62
CPNE1-220ENST00000458038 ADGRF4Q8IZF3 695 aa25.16■■□□□ 1.62
CPNE1-220ENST00000458038 KRT23Q9C075 422 aa25.16■■□□□ 1.62
CPNE1-220ENST00000458038 CNNM2Q9H8M5 875 aa25.16■■□□□ 1.62
CPNE1-220ENST00000458038 PRDM6Q9NQX0 595 aa25.16■■□□□ 1.62
CPNE1-220ENST00000458038 THEGQ9P2T0 379 aa25.16■■□□□ 1.62
CPNE1-220ENST00000458038 MRPL11Q9Y3B7 192 aaKnown RBP25.16■■□□□ 1.62
CPNE1-220ENST00000458038 KIAA1217Q5T5P2 1943 aa25.16■■□□□ 1.62
CPNE1-220ENST00000458038 MUC3AQ02505 3323 aa25.15■■□□□ 1.62
CPNE1-220ENST00000458038 ADGRE1Q14246 886 aa25.15■■□□□ 1.62
CPNE1-220ENST00000458038 STXBP2Q15833 593 aa25.15■■□□□ 1.62
CPNE1-220ENST00000458038 PPP2R2DQ66LE6 453 aa25.15■■□□□ 1.62
CPNE1-220ENST00000458038 PHOSPHO2Q8TCD6 241 aa25.15■■□□□ 1.62
CPNE1-220ENST00000458038 PPM1EQ8WY54 764 aa25.15■■□□□ 1.62
CPNE1-220ENST00000458038 COPS5Q92905 334 aa25.15■■□□□ 1.62
CPNE1-220ENST00000458038 TSPYL2Q9H2G4 693 aaPredicted RBP25.15■■□□□ 1.62
CPNE1-220ENST00000458038 SCN5AQ14524 2016 aa25.15■■□□□ 1.62
CPNE1-220ENST00000458038 TRIP12Q14669 1992 aaPredicted RBP25.14■■□□□ 1.62
CPNE1-220ENST00000458038 GH1P01241 217 aa25.14■■□□□ 1.62
CPNE1-220ENST00000458038 PARP1P09874 1014 aaKnown RBP25.14■■□□□ 1.62
CPNE1-220ENST00000458038 TMEM67Q5HYA8 995 aa25.14■■□□□ 1.62
CPNE1-220ENST00000458038 DEFB128Q7Z7B8 93 aa25.14■■□□□ 1.62
CPNE1-220ENST00000458038 FBXO11Q86XK2 927 aa25.14■■□□□ 1.62
CPNE1-220ENST00000458038 CCDC155Q8N6L0 562 aa25.14■■□□□ 1.62
CPNE1-220ENST00000458038 SLC9A7Q96T83 725 aa25.14■■□□□ 1.62
CPNE1-220ENST00000458038 ZSWIM5Q9P217 1185 aa25.14■■□□□ 1.62
CPNE1-220ENST00000458038 NOD1Q9Y239 953 aa25.14■■□□□ 1.62
CPNE1-220ENST00000458038 B4E1Z4 1266 aa25.13■■□□□ 1.61
CPNE1-220ENST00000458038 IQCF3P0C7M6 154 aa25.13■■□□□ 1.61
CPNE1-220ENST00000458038 RABGGTBP53611 331 aa25.13■■□□□ 1.61
CPNE1-220ENST00000458038 MRPS5P82675 430 aaKnown RBP25.13■■□□□ 1.61
CPNE1-220ENST00000458038 ENAHQ8N8S7 591 aaPredicted RBP25.13■■□□□ 1.61
CPNE1-220ENST00000458038 SYTL5Q8TDW5 730 aaPredicted RBP25.13■■□□□ 1.61
CPNE1-220ENST00000458038 RMDN3Q96TC7 470 aa25.13■■□□□ 1.61
CPNE1-220ENST00000458038 CPVLQ9H3G5 476 aa25.13■■□□□ 1.61
CPNE1-220ENST00000458038 ARIH2O95376 493 aa25.12■■□□□ 1.61
CPNE1-220ENST00000458038 CASTP20810 708 aaKnown RBP25.12■■□□□ 1.61
CPNE1-220ENST00000458038 SESTD1Q86VW0 696 aa25.12■■□□□ 1.61
CPNE1-220ENST00000458038 CAGE1Q8TC20 777 aa25.12■■□□□ 1.61
CPNE1-220ENST00000458038 ASB2Q96Q27 587 aa25.12■■□□□ 1.61
CPNE1-220ENST00000458038 TAAR1Q96RJ0 339 aa25.12■■□□□ 1.61
CPNE1-220ENST00000458038 UBAC1Q9BSL1 405 aa25.12■■□□□ 1.61
CPNE1-220ENST00000458038 BDP1A6H8Y1 2624 aa25.11■■□□□ 1.61
CPNE1-220ENST00000458038 TNFRSF10AO00220 468 aa25.11■■□□□ 1.61
CPNE1-220ENST00000458038 DHX16O60231 1041 aaKnown RBP25.11■■□□□ 1.61
CPNE1-220ENST00000458038 PARNO95453 639 aaKnown RBP25.11■■□□□ 1.61
CPNE1-220ENST00000458038 QRICH1Q2TAL8 776 aa25.11■■□□□ 1.61
CPNE1-220ENST00000458038 SEPT14Q6ZU15 432 aa25.11■■□□□ 1.61
CPNE1-220ENST00000458038 SAMD3Q8N6K7 520 aa25.11■■□□□ 1.61
CPNE1-220ENST00000458038 AFG1LQ8WV93 481 aa25.11■■□□□ 1.61
CPNE1-220ENST00000458038 TBC1D5Q92609 795 aa25.11■■□□□ 1.61
CPNE1-220ENST00000458038 MAP3K20Q9NYL2 800 aaKnown RBP25.11■■□□□ 1.61
CPNE1-220ENST00000458038 TANC1Q9C0D5 1861 aa25.11■■□□□ 1.61
CPNE1-220ENST00000458038 TET1Q8NFU7 2136 aa25.1■■□□□ 1.61
CPNE1-220ENST00000458038 KIF28PB7ZC32 967 aa25.1■■□□□ 1.61
CPNE1-220ENST00000458038 EIF3JO75822 258 aaKnown RBP25.1■■□□□ 1.61
CPNE1-220ENST00000458038 BAIAP3O94812 1187 aa25.1■■□□□ 1.61
CPNE1-220ENST00000458038 MMP3P08254 477 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms