RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 TNKSO95271 1327 aa16.96■□□□□ 0.31
UPF3AP2-201ENST00000457924 ICAM1P05362 532 aa16.96■□□□□ 0.31
UPF3AP2-201ENST00000457924 MYL3P08590 195 aa16.96■□□□□ 0.31
UPF3AP2-201ENST00000457924 CYP2C9P11712 490 aa16.96■□□□□ 0.31
UPF3AP2-201ENST00000457924 ACTN1P12814 892 aa16.96■□□□□ 0.31
UPF3AP2-201ENST00000457924 CPT1AP50416 773 aa16.96■□□□□ 0.31
UPF3AP2-201ENST00000457924 TTLL4Q14679 1199 aa16.96■□□□□ 0.31
UPF3AP2-201ENST00000457924 CCDC96Q2M329 555 aa16.96■□□□□ 0.31
UPF3AP2-201ENST00000457924 DEFB128Q7Z7B8 93 aa16.96■□□□□ 0.31
UPF3AP2-201ENST00000457924 PURBQ96QR8 312 aaKnown RBP16.96■□□□□ 0.31
UPF3AP2-201ENST00000457924 FSD1Q9BTV5 496 aa16.96■□□□□ 0.31
UPF3AP2-201ENST00000457924 WDR11Q9BZH6 1224 aa16.96■□□□□ 0.31
UPF3AP2-201ENST00000457924 RCAN3Q9UKA8 241 aa16.96■□□□□ 0.31
UPF3AP2-201ENST00000457924 SCN5AQ14524 2016 aa16.96■□□□□ 0.3
UPF3AP2-201ENST00000457924 TTC41PQ6P2S7 1318 aa16.96■□□□□ 0.3
UPF3AP2-201ENST00000457924 LOC102724159A0A0B4J2E5 919 aa16.95■□□□□ 0.3
UPF3AP2-201ENST00000457924 ERC2O15083 957 aa16.95■□□□□ 0.3
UPF3AP2-201ENST00000457924 NMT2O60551 498 aa16.95■□□□□ 0.3
UPF3AP2-201ENST00000457924 CA3P07451 260 aa16.95■□□□□ 0.3
UPF3AP2-201ENST00000457924 BMP1P13497 986 aa16.95■□□□□ 0.3
UPF3AP2-201ENST00000457924 ALDH5A1P51649 535 aaPredicted RBP16.95■□□□□ 0.3
UPF3AP2-201ENST00000457924 PURAQ00577 322 aaKnown RBP16.95■□□□□ 0.3
UPF3AP2-201ENST00000457924 BAATQ14032 418 aaPredicted RBP16.95■□□□□ 0.3
UPF3AP2-201ENST00000457924 PWP2Q15269 919 aaKnown RBP16.95■□□□□ 0.3
UPF3AP2-201ENST00000457924 BRDTQ58F21 947 aaPredicted RBP16.95■□□□□ 0.3
UPF3AP2-201ENST00000457924 VWCEQ96DN2 955 aa16.95■□□□□ 0.3
UPF3AP2-201ENST00000457924 NECAB3Q96P71 396 aaPredicted RBP16.95■□□□□ 0.3
UPF3AP2-201ENST00000457924 MTG1Q9BT17 334 aaPredicted RBP16.95■□□□□ 0.3
UPF3AP2-201ENST00000457924 C1QTNF1Q9BXJ1 281 aa16.95■□□□□ 0.3
UPF3AP2-201ENST00000457924 IL17RBQ9NRM6 502 aa16.95■□□□□ 0.3
UPF3AP2-201ENST00000457924 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.95■□□□□ 0.3
UPF3AP2-201ENST00000457924 CHD9Q3L8U1 2897 aa16.95■□□□□ 0.3
UPF3AP2-201ENST00000457924 RFC2P35250 354 aa16.94■□□□□ 0.3
UPF3AP2-201ENST00000457924 TFF2Q03403 129 aa16.94■□□□□ 0.3
UPF3AP2-201ENST00000457924 CTDSPL2Q05D32 466 aa16.94■□□□□ 0.3
UPF3AP2-201ENST00000457924 FAM47CQ5HY64 1035 aa16.94■□□□□ 0.3
UPF3AP2-201ENST00000457924 ZMYM1Q5SVZ6 1142 aa16.94■□□□□ 0.3
UPF3AP2-201ENST00000457924 C20orf194Q5TEA3 1177 aa16.94■□□□□ 0.3
UPF3AP2-201ENST00000457924 RASGRP2Q7LDG7 609 aa16.94■□□□□ 0.3
UPF3AP2-201ENST00000457924 OR6J1Q8NGC5 347 aa16.94■□□□□ 0.3
UPF3AP2-201ENST00000457924 DCAF4Q8WV16 495 aa16.94■□□□□ 0.3
UPF3AP2-201ENST00000457924 FAM122AQ96E09 287 aa16.94■□□□□ 0.3
UPF3AP2-201ENST00000457924 SLC9A7Q96T83 725 aa16.94■□□□□ 0.3
UPF3AP2-201ENST00000457924 RANBP17Q9H2T7 1088 aaKnown RBP16.94■□□□□ 0.3
UPF3AP2-201ENST00000457924 WDR70Q9NW82 654 aa16.94■□□□□ 0.3
UPF3AP2-201ENST00000457924 RAD50Q92878 1312 aa16.94■□□□□ 0.3
UPF3AP2-201ENST00000457924 PTPDC1A2A3K4 754 aa16.93■□□□□ 0.3
UPF3AP2-201ENST00000457924 RANBP6O60518 1105 aaKnown RBP16.93■□□□□ 0.3
UPF3AP2-201ENST00000457924 POU3F3P20264 500 aaPredicted RBP16.93■□□□□ 0.3
UPF3AP2-201ENST00000457924 PLA2G5P39877 138 aa16.93■□□□□ 0.3
UPF3AP2-201ENST00000457924 KCNQ1P51787 676 aa16.93■□□□□ 0.3
UPF3AP2-201ENST00000457924 RETREG2Q8NC44 543 aa16.93■□□□□ 0.3
UPF3AP2-201ENST00000457924 PHOSPHO2Q8TCD6 241 aa16.93■□□□□ 0.3
UPF3AP2-201ENST00000457924 MPHOSPH6Q99547 160 aaKnown RBP16.93■□□□□ 0.3
UPF3AP2-201ENST00000457924 CERS4Q9HA82 394 aa16.93■□□□□ 0.3
UPF3AP2-201ENST00000457924 INCENPQ9NQS7 918 aa16.93■□□□□ 0.3
UPF3AP2-201ENST00000457924 MTCH2Q9Y6C9 303 aa16.93■□□□□ 0.3
UPF3AP2-201ENST00000457924 PRRC2BQ5JSZ5 2229 aaKnown RBP16.93■□□□□ 0.3
UPF3AP2-201ENST00000457924 SCN10AQ9Y5Y9 1956 aa16.92■□□□□ 0.3
UPF3AP2-201ENST00000457924 RBM47A0AV96 593 aaKnown RBP16.92■□□□□ 0.3
UPF3AP2-201ENST00000457924 KIF28PB7ZC32 967 aa16.92■□□□□ 0.3
UPF3AP2-201ENST00000457924 RFXAPO00287 272 aa16.92■□□□□ 0.3
UPF3AP2-201ENST00000457924 SNPHO15079 494 aa16.92■□□□□ 0.3
UPF3AP2-201ENST00000457924 NKRFO15226 690 aaKnown RBP eCLIP16.92■□□□□ 0.3
UPF3AP2-201ENST00000457924 SLC16A2P36021 539 aa16.92■□□□□ 0.3
UPF3AP2-201ENST00000457924 CAMK2BQ13554 666 aa16.92■□□□□ 0.3
UPF3AP2-201ENST00000457924 NBPF20Q3BBV1 942 aa16.92■□□□□ 0.3
UPF3AP2-201ENST00000457924 TTBK2Q6IQ55 1244 aa16.92■□□□□ 0.3
UPF3AP2-201ENST00000457924 NFRKBQ6P4R8 1299 aa16.92■□□□□ 0.3
UPF3AP2-201ENST00000457924 FTOQ9C0B1 505 aaKnown RBP eCLIP16.92■□□□□ 0.3
UPF3AP2-201ENST00000457924 COG5Q9UP83 839 aa16.92■□□□□ 0.3
UPF3AP2-201ENST00000457924 TANC1Q9C0D5 1861 aa16.91■□□□□ 0.3
UPF3AP2-201ENST00000457924 NFIBO00712 420 aa16.91■□□□□ 0.3
UPF3AP2-201ENST00000457924 KPNA6O60684 536 aa16.91■□□□□ 0.3
UPF3AP2-201ENST00000457924 CALML3P27482 149 aa16.91■□□□□ 0.3
UPF3AP2-201ENST00000457924 NOVP48745 357 aa16.91■□□□□ 0.3
UPF3AP2-201ENST00000457924 PDE4DQ08499 809 aa16.91■□□□□ 0.3
UPF3AP2-201ENST00000457924 PPP2R5BQ15173 497 aa16.91■□□□□ 0.3
UPF3AP2-201ENST00000457924 SYDE2Q5VT97 1194 aa16.91■□□□□ 0.3
UPF3AP2-201ENST00000457924 BTNL9Q6UXG8 535 aa16.91■□□□□ 0.3
UPF3AP2-201ENST00000457924 RNF207Q6ZRF8 634 aa16.91■□□□□ 0.3
UPF3AP2-201ENST00000457924 PI4K2BQ8TCG2 481 aa16.91■□□□□ 0.3
UPF3AP2-201ENST00000457924 PNMA2Q9UL42 364 aa16.91■□□□□ 0.3
UPF3AP2-201ENST00000457924 CHD7Q9P2D1 2997 aa16.91■□□□□ 0.3
UPF3AP2-201ENST00000457924 IQCF3P0C7M6 154 aa16.9■□□□□ 0.3
UPF3AP2-201ENST00000457924 PTPN11Q06124 597 aaPredicted RBP16.9■□□□□ 0.3
UPF3AP2-201ENST00000457924 BFSP2Q13515 415 aa16.9■□□□□ 0.3
UPF3AP2-201ENST00000457924 SLC30A10Q6XR72 485 aa16.9■□□□□ 0.3
UPF3AP2-201ENST00000457924 HERC6Q8IVU3 1022 aa16.9■□□□□ 0.3
UPF3AP2-201ENST00000457924 SCFD2Q8WU76 684 aa16.9■□□□□ 0.3
UPF3AP2-201ENST00000457924 ARNTL2Q8WYA1 636 aa16.9■□□□□ 0.3
UPF3AP2-201ENST00000457924 ANAPC4Q9UJX5 808 aa16.9■□□□□ 0.3
UPF3AP2-201ENST00000457924 NOD1Q9Y239 953 aa16.9■□□□□ 0.3
UPF3AP2-201ENST00000457924 FRMPD2Q68DX3 1309 aaPredicted RBP16.9■□□□□ 0.3
UPF3AP2-201ENST00000457924 B4DLN1 442 aa16.89■□□□□ 0.29
UPF3AP2-201ENST00000457924 FOXP2O15409 715 aa16.89■□□□□ 0.29
UPF3AP2-201ENST00000457924 ORC4O43929 436 aa16.89■□□□□ 0.29
UPF3AP2-201ENST00000457924 TOP1P11387 765 aaKnown RBP16.89■□□□□ 0.29
UPF3AP2-201ENST00000457924 MRPL12P52815 198 aaKnown RBP16.89■□□□□ 0.29
UPF3AP2-201ENST00000457924 GPCPD1Q9NPB8 672 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms