RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 PRKAG2Q9UGJ0 569 aa20.88■□□□□ 0.93
PDLIM2-215ENST00000456545 ZMYND8Q9ULU4 1186 aaPredicted RBP20.88■□□□□ 0.93
PDLIM2-215ENST00000456545 MKI67P46013 3256 aaKnown RBP20.88■□□□□ 0.93
PDLIM2-215ENST00000456545 LCTP09848 1927 aa20.88■□□□□ 0.93
PDLIM2-215ENST00000456545 MOXD2PA6NHM9 499 aa20.87■□□□□ 0.93
PDLIM2-215ENST00000456545 ADCY6O43306 1168 aa20.87■□□□□ 0.93
PDLIM2-215ENST00000456545 RTP1P59025 263 aa20.87■□□□□ 0.93
PDLIM2-215ENST00000456545 APOBRQ0VD83 1088 aa20.87■□□□□ 0.93
PDLIM2-215ENST00000456545 KLHDC9Q8NEP7 349 aa20.87■□□□□ 0.93
PDLIM2-215ENST00000456545 SMARCC2Q8TAQ2 1214 aa20.87■□□□□ 0.93
PDLIM2-215ENST00000456545 SCFD2Q8WU76 684 aa20.87■□□□□ 0.93
PDLIM2-215ENST00000456545 GLT1D1Q96MS3 346 aa20.87■□□□□ 0.93
PDLIM2-215ENST00000456545 UPF3AQ9H1J1 476 aaKnown RBP20.87■□□□□ 0.93
PDLIM2-215ENST00000456545 STARD7Q9NQZ5 370 aa20.87■□□□□ 0.93
PDLIM2-215ENST00000456545 Q9Y3F1 56 aa20.87■□□□□ 0.93
PDLIM2-215ENST00000456545 CYP46A1Q9Y6A2 500 aa20.87■□□□□ 0.93
PDLIM2-215ENST00000456545 CCDC196A0A1B0GTZ2 297 aa20.86■□□□□ 0.93
PDLIM2-215ENST00000456545 A0A1W2PQ45 241 aaPredicted RBP20.86■□□□□ 0.93
PDLIM2-215ENST00000456545 A0A1W2PQY0 241 aa20.86■□□□□ 0.93
PDLIM2-215ENST00000456545 MYCLP12524 364 aaPredicted RBP20.86■□□□□ 0.93
PDLIM2-215ENST00000456545 SYN1P17600 705 aa20.86■□□□□ 0.93
PDLIM2-215ENST00000456545 EDNRBP24530 442 aa20.86■□□□□ 0.93
PDLIM2-215ENST00000456545 BEX3Q00994 111 aa20.86■□□□□ 0.93
PDLIM2-215ENST00000456545 PPP2R5BQ15173 497 aa20.86■□□□□ 0.93
PDLIM2-215ENST00000456545 DUSP28Q4G0W2 176 aa20.86■□□□□ 0.93
PDLIM2-215ENST00000456545 SEPT14Q6ZU15 432 aa20.86■□□□□ 0.93
PDLIM2-215ENST00000456545 RUFY3Q7L099 469 aa20.86■□□□□ 0.93
PDLIM2-215ENST00000456545 PXMP2Q9NR77 195 aa20.86■□□□□ 0.93
PDLIM2-215ENST00000456545 GNEQ9Y223 722 aaKnown RBP20.86■□□□□ 0.93
PDLIM2-215ENST00000456545 hCG_1642624A0A1W2PR95 340 aa20.85■□□□□ 0.93
PDLIM2-215ENST00000456545 MYADML2A6NDP7 307 aa20.85■□□□□ 0.93
PDLIM2-215ENST00000456545 OPLAHO14841 1288 aa20.85■□□□□ 0.93
PDLIM2-215ENST00000456545 ASGR1P07306 291 aa20.85■□□□□ 0.93
PDLIM2-215ENST00000456545 NR3C2P08235 984 aa20.85■□□□□ 0.93
PDLIM2-215ENST00000456545 TXNP10599 105 aaKnown RBP20.85■□□□□ 0.93
PDLIM2-215ENST00000456545 CST5P28325 142 aaPredicted RBP20.85■□□□□ 0.93
PDLIM2-215ENST00000456545 METAP2P50579 478 aaKnown RBP eCLIP20.85■□□□□ 0.93
PDLIM2-215ENST00000456545 TTLL4Q14679 1199 aa20.85■□□□□ 0.93
PDLIM2-215ENST00000456545 FSCN1Q16658 493 aaKnown RBP20.85■□□□□ 0.93
PDLIM2-215ENST00000456545 BRDTQ58F21 947 aaPredicted RBP20.85■□□□□ 0.93
PDLIM2-215ENST00000456545 RBM47A0AV96 593 aaKnown RBP20.84■□□□□ 0.93
PDLIM2-215ENST00000456545 NKRFO15226 690 aaKnown RBP eCLIP20.84■□□□□ 0.93
PDLIM2-215ENST00000456545 EIF3JO75822 258 aaKnown RBP20.84■□□□□ 0.93
PDLIM2-215ENST00000456545 IRX5P78411 483 aaPredicted RBP20.84■□□□□ 0.93
PDLIM2-215ENST00000456545 CHRDL2Q6WN34 429 aa20.84■□□□□ 0.93
PDLIM2-215ENST00000456545 HEATR3Q7Z4Q2 680 aa20.84■□□□□ 0.93
PDLIM2-215ENST00000456545 OR6J1Q8NGC5 347 aa20.84■□□□□ 0.93
PDLIM2-215ENST00000456545 ZSWIM6Q9HCJ5 1215 aa20.84■□□□□ 0.93
PDLIM2-215ENST00000456545 ALPK3Q96L96 1907 aa20.84■□□□□ 0.93
PDLIM2-215ENST00000456545 RCAN1P53805 252 aa20.83■□□□□ 0.93
PDLIM2-215ENST00000456545 GHRHRQ02643 423 aa20.83■□□□□ 0.93
PDLIM2-215ENST00000456545 TRIM60Q495X7 471 aa20.83■□□□□ 0.93
PDLIM2-215ENST00000456545 TMEM63BQ5T3F8 832 aa20.83■□□□□ 0.93
PDLIM2-215ENST00000456545 PSTPIP2Q9H939 334 aa20.83■□□□□ 0.93
PDLIM2-215ENST00000456545 V9GY48 417 aaPredicted RBP20.83■□□□□ 0.93
PDLIM2-215ENST00000456545 CCND2P30279 289 aa20.82■□□□□ 0.92
PDLIM2-215ENST00000456545 CPT1AP50416 773 aa20.82■□□□□ 0.92
PDLIM2-215ENST00000456545 AKAP17AQ02040 695 aaKnown RBP20.82■□□□□ 0.92
PDLIM2-215ENST00000456545 CCSAPQ6IQ19 270 aaPredicted RBP20.82■□□□□ 0.92
PDLIM2-215ENST00000456545 PDCD2LQ9BRP1 358 aa20.82■□□□□ 0.92
PDLIM2-215ENST00000456545 TM6SF1Q9BZW5 370 aa20.82■□□□□ 0.92
PDLIM2-215ENST00000456545 PRDM5Q9NQX1 630 aaPredicted RBP20.82■□□□□ 0.92
PDLIM2-215ENST00000456545 COLQQ9Y215 455 aaPredicted RBP20.82■□□□□ 0.92
PDLIM2-215ENST00000456545 ELP1O95163 1332 aa20.81■□□□□ 0.92
PDLIM2-215ENST00000456545 CABYRO75952 493 aa20.81■□□□□ 0.92
PDLIM2-215ENST00000456545 PTGS1P23219 599 aa20.81■□□□□ 0.92
PDLIM2-215ENST00000456545 CDC27P30260 824 aa20.81■□□□□ 0.92
PDLIM2-215ENST00000456545 ADD1P35611 737 aaKnown RBP20.81■□□□□ 0.92
PDLIM2-215ENST00000456545 PGM5Q15124 567 aa20.81■□□□□ 0.92
PDLIM2-215ENST00000456545 USP17L6PQ6QN14 398 aa20.81■□□□□ 0.92
PDLIM2-215ENST00000456545 FBXL16Q8N461 479 aa20.81■□□□□ 0.92
PDLIM2-215ENST00000456545 LBHD1Q9BQE6 289 aaPredicted RBP20.81■□□□□ 0.92
PDLIM2-215ENST00000456545 PDRG1Q9NUG6 133 aa20.81■□□□□ 0.92
PDLIM2-215ENST00000456545 MRVI1Q9Y6F6 885 aa20.81■□□□□ 0.92
PDLIM2-215ENST00000456545 LRRC37A2A6NM11 1700 aa20.81■□□□□ 0.92
PDLIM2-215ENST00000456545 DCDC2CA8MYV0 355 aa20.8■□□□□ 0.92
PDLIM2-215ENST00000456545 PQBP1O60828 265 aaKnown RBP20.8■□□□□ 0.92
PDLIM2-215ENST00000456545 MYL3P08590 195 aa20.8■□□□□ 0.92
PDLIM2-215ENST00000456545 NAPAP54920 295 aa20.8■□□□□ 0.92
PDLIM2-215ENST00000456545 NKX3-2P78367 333 aa20.8■□□□□ 0.92
PDLIM2-215ENST00000456545 TLE2Q04725 743 aa20.8■□□□□ 0.92
PDLIM2-215ENST00000456545 C1orf53Q5VUE5 145 aa20.8■□□□□ 0.92
PDLIM2-215ENST00000456545 CXCL17Q6UXB2 119 aa20.8■□□□□ 0.92
PDLIM2-215ENST00000456545 GPKOWQ92917 476 aaPredicted RBP eCLIP20.8■□□□□ 0.92
PDLIM2-215ENST00000456545 UPF3BQ9BZI7 483 aaKnown RBP20.8■□□□□ 0.92
PDLIM2-215ENST00000456545 POLR3EQ9NVU0 708 aa20.8■□□□□ 0.92
PDLIM2-215ENST00000456545 CNTNAP5Q8WYK1 1306 aa20.79■□□□□ 0.92
PDLIM2-215ENST00000456545 A0A0U1RQG5 324 aaPredicted RBP20.79■□□□□ 0.92
PDLIM2-215ENST00000456545 CTAGE5O15320 804 aa20.79■□□□□ 0.92
PDLIM2-215ENST00000456545 GH1P01241 217 aa20.79■□□□□ 0.92
PDLIM2-215ENST00000456545 SNX17Q15036 470 aa20.79■□□□□ 0.92
PDLIM2-215ENST00000456545 LY6KQ17RY6 165 aa20.79■□□□□ 0.92
PDLIM2-215ENST00000456545 KCNV1Q6PIU1 500 aa20.79■□□□□ 0.92
PDLIM2-215ENST00000456545 VSIG10LQ86VR7 867 aa20.79■□□□□ 0.92
PDLIM2-215ENST00000456545 COPS5Q92905 334 aa20.79■□□□□ 0.92
PDLIM2-215ENST00000456545 AGXT2Q9BYV1 514 aa20.79■□□□□ 0.92
PDLIM2-215ENST00000456545 MROH7Q68CQ1 1323 aa20.78■□□□□ 0.92
PDLIM2-215ENST00000456545 SPDYE3A6NKU9 549 aa20.78■□□□□ 0.92
PDLIM2-215ENST00000456545 PIK3CDO00329 1044 aa20.78■□□□□ 0.92
PDLIM2-215ENST00000456545 CCT2P78371 535 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms