RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 KCNA10Q16322 511 aa18.78■□□□□ 0.6
SMPD4-214ENST00000455548 DUSP28Q4G0W2 176 aa18.78■□□□□ 0.6
SMPD4-214ENST00000455548 GNASQ5JWF2 1037 aa18.78■□□□□ 0.6
SMPD4-214ENST00000455548 SLC39A5Q6ZMH5 540 aa18.78■□□□□ 0.6
SMPD4-214ENST00000455548 TLK2Q86UE8 772 aa18.78■□□□□ 0.6
SMPD4-214ENST00000455548 SCFD2Q8WU76 684 aa18.78■□□□□ 0.6
SMPD4-214ENST00000455548 BRF1Q92994 677 aa18.78■□□□□ 0.6
SMPD4-214ENST00000455548 FERMT2Q96AC1 680 aa18.78■□□□□ 0.6
SMPD4-214ENST00000455548 WDR11Q9BZH6 1224 aa18.78■□□□□ 0.6
SMPD4-214ENST00000455548 TM6SF1Q9BZW5 370 aa18.78■□□□□ 0.6
SMPD4-214ENST00000455548 NAP1L2Q9ULW6 460 aaPredicted RBP18.78■□□□□ 0.6
SMPD4-214ENST00000455548 GNEQ9Y223 722 aaKnown RBP18.78■□□□□ 0.6
SMPD4-214ENST00000455548 CCDC196A0A1B0GTZ2 297 aa18.77■□□□□ 0.6
SMPD4-214ENST00000455548 A0A1W2PQ45 241 aaPredicted RBP18.77■□□□□ 0.6
SMPD4-214ENST00000455548 A0A1W2PQY0 241 aa18.77■□□□□ 0.6
SMPD4-214ENST00000455548 SMPD1P17405 629 aa18.77■□□□□ 0.6
SMPD4-214ENST00000455548 EIF2AK2P19525 551 aaKnown RBP18.77■□□□□ 0.6
SMPD4-214ENST00000455548 ACLYP53396 1101 aa18.77■□□□□ 0.6
SMPD4-214ENST00000455548 APOBRQ0VD83 1088 aa18.77■□□□□ 0.6
SMPD4-214ENST00000455548 STXBP2Q15833 593 aa18.77■□□□□ 0.6
SMPD4-214ENST00000455548 CCSAPQ6IQ19 270 aaPredicted RBP18.77■□□□□ 0.6
SMPD4-214ENST00000455548 RUFY3Q7L099 469 aa18.77■□□□□ 0.6
SMPD4-214ENST00000455548 CMTR1Q8N1G2 835 aaKnown RBP18.77■□□□□ 0.6
SMPD4-214ENST00000455548 CCDC82Q8N4S0 544 aa18.77■□□□□ 0.6
SMPD4-214ENST00000455548 AGXT2Q9BYV1 514 aa18.77■□□□□ 0.6
SMPD4-214ENST00000455548 ZSWIM6Q9HCJ5 1215 aa18.77■□□□□ 0.6
SMPD4-214ENST00000455548 PXMP2Q9NR77 195 aa18.77■□□□□ 0.6
SMPD4-214ENST00000455548 CYP46A1Q9Y6A2 500 aa18.77■□□□□ 0.6
SMPD4-214ENST00000455548 MYADML2A6NDP7 307 aa18.76■□□□□ 0.59
SMPD4-214ENST00000455548 NKRFO15226 690 aaKnown RBP eCLIP18.76■□□□□ 0.59
SMPD4-214ENST00000455548 DYNC1LI2O43237 492 aaPredicted RBP18.76■□□□□ 0.59
SMPD4-214ENST00000455548 NR3C2P08235 984 aa18.76■□□□□ 0.59
SMPD4-214ENST00000455548 HOXA13P31271 388 aaPredicted RBP18.76■□□□□ 0.59
SMPD4-214ENST00000455548 METAP2P50579 478 aaKnown RBP eCLIP18.76■□□□□ 0.59
SMPD4-214ENST00000455548 RTP1P59025 263 aa18.76■□□□□ 0.59
SMPD4-214ENST00000455548 C1orf53Q5VUE5 145 aa18.76■□□□□ 0.59
SMPD4-214ENST00000455548 CUL5Q93034 780 aa18.76■□□□□ 0.59
SMPD4-214ENST00000455548 CNTNAP5Q8WYK1 1306 aa18.75■□□□□ 0.59
SMPD4-214ENST00000455548 CTAGE5O15320 804 aa18.75■□□□□ 0.59
SMPD4-214ENST00000455548 ZEB2O60315 1214 aa18.75■□□□□ 0.59
SMPD4-214ENST00000455548 EIF3JO75822 258 aaKnown RBP18.75■□□□□ 0.59
SMPD4-214ENST00000455548 ASGR1P07306 291 aa18.75■□□□□ 0.59
SMPD4-214ENST00000455548 SNX17Q15036 470 aa18.75■□□□□ 0.59
SMPD4-214ENST00000455548 FSCN1Q16658 493 aaKnown RBP18.75■□□□□ 0.59
SMPD4-214ENST00000455548 ATP11BQ9Y2G3 1177 aa18.75■□□□□ 0.59
SMPD4-214ENST00000455548 NID2Q14112 1375 aa18.75■□□□□ 0.59
SMPD4-214ENST00000455548 ELP1O95163 1332 aa18.74■□□□□ 0.59
SMPD4-214ENST00000455548 FUT2Q10981 343 aa18.74■□□□□ 0.59
SMPD4-214ENST00000455548 TTLL4Q14679 1199 aa18.74■□□□□ 0.59
SMPD4-214ENST00000455548 FCHSD1Q86WN1 690 aa18.74■□□□□ 0.59
SMPD4-214ENST00000455548 GLT1D1Q96MS3 346 aa18.74■□□□□ 0.59
SMPD4-214ENST00000455548 PDCD2LQ9BRP1 358 aa18.74■□□□□ 0.59
SMPD4-214ENST00000455548 STARD7Q9NQZ5 370 aa18.74■□□□□ 0.59
SMPD4-214ENST00000455548 FAM217BQ9NTX9 383 aaPredicted RBP18.74■□□□□ 0.59
SMPD4-214ENST00000455548 ZMYND8Q9ULU4 1186 aaPredicted RBP18.74■□□□□ 0.59
SMPD4-214ENST00000455548 hCG_1642624A0A1W2PR95 340 aa18.73■□□□□ 0.59
SMPD4-214ENST00000455548 PIK3CDO00329 1044 aa18.73■□□□□ 0.59
SMPD4-214ENST00000455548 CABYRO75952 493 aa18.73■□□□□ 0.59
SMPD4-214ENST00000455548 TXNP10599 105 aaKnown RBP18.73■□□□□ 0.59
SMPD4-214ENST00000455548 CDC27P30260 824 aa18.73■□□□□ 0.59
SMPD4-214ENST00000455548 ANAPC15P60006 121 aa18.73■□□□□ 0.59
SMPD4-214ENST00000455548 IRX5P78411 483 aaPredicted RBP18.73■□□□□ 0.59
SMPD4-214ENST00000455548 BEX3Q00994 111 aa18.73■□□□□ 0.59
SMPD4-214ENST00000455548 HEATR3Q7Z4Q2 680 aa18.73■□□□□ 0.59
SMPD4-214ENST00000455548 PSTPIP2Q9H939 334 aa18.73■□□□□ 0.59
SMPD4-214ENST00000455548 hCG_1984214I3L0E3 225 aa18.72■□□□□ 0.59
SMPD4-214ENST00000455548 MYCLP12524 364 aaPredicted RBP18.72■□□□□ 0.59
SMPD4-214ENST00000455548 CCND2P30279 289 aa18.72■□□□□ 0.59
SMPD4-214ENST00000455548 CPT1AP50416 773 aa18.72■□□□□ 0.59
SMPD4-214ENST00000455548 EVCP57679 992 aa18.72■□□□□ 0.59
SMPD4-214ENST00000455548 PGM5Q15124 567 aa18.72■□□□□ 0.59
SMPD4-214ENST00000455548 TRIM60Q495X7 471 aa18.72■□□□□ 0.59
SMPD4-214ENST00000455548 BRDTQ58F21 947 aaPredicted RBP18.72■□□□□ 0.59
SMPD4-214ENST00000455548 TMEM63BQ5T3F8 832 aa18.72■□□□□ 0.59
SMPD4-214ENST00000455548 CCDC62Q6P9F0 684 aa18.72■□□□□ 0.59
SMPD4-214ENST00000455548 SEPT14Q6ZU15 432 aa18.72■□□□□ 0.59
SMPD4-214ENST00000455548 VSIG10LQ86VR7 867 aa18.72■□□□□ 0.59
SMPD4-214ENST00000455548 TEX2Q8IWB9 1127 aa18.72■□□□□ 0.59
SMPD4-214ENST00000455548 ZNF713Q8N859 430 aaPredicted RBP18.72■□□□□ 0.59
SMPD4-214ENST00000455548 OR6J1Q8NGC5 347 aa18.72■□□□□ 0.59
SMPD4-214ENST00000455548 SMARCC2Q8TAQ2 1214 aa18.72■□□□□ 0.59
SMPD4-214ENST00000455548 VTI1AQ96AJ9 217 aa18.72■□□□□ 0.59
SMPD4-214ENST00000455548 V9GY48 417 aaPredicted RBP18.72■□□□□ 0.59
SMPD4-214ENST00000455548 FRMPD4Q14CM0 1322 aa18.72■□□□□ 0.59
SMPD4-214ENST00000455548 A0A0U1RQG5 324 aaPredicted RBP18.71■□□□□ 0.59
SMPD4-214ENST00000455548 SYN1P17600 705 aa18.71■□□□□ 0.59
SMPD4-214ENST00000455548 ADD1P35611 737 aaKnown RBP18.71■□□□□ 0.59
SMPD4-214ENST00000455548 TOB2Q14106 344 aaPredicted RBP18.71■□□□□ 0.59
SMPD4-214ENST00000455548 PPP1R18Q6NYC8 613 aa18.71■□□□□ 0.59
SMPD4-214ENST00000455548 USP17L6PQ6QN14 398 aa18.71■□□□□ 0.59
SMPD4-214ENST00000455548 UPF3BQ9BZI7 483 aaKnown RBP18.71■□□□□ 0.59
SMPD4-214ENST00000455548 POLR3EQ9NVU0 708 aa18.71■□□□□ 0.59
SMPD4-214ENST00000455548 RBM27Q9P2N5 1060 aaKnown RBP18.71■□□□□ 0.59
SMPD4-214ENST00000455548 PRKAG2Q9UGJ0 569 aa18.71■□□□□ 0.59
SMPD4-214ENST00000455548 TRIOBPQ9H2D6 2365 aa18.71■□□□□ 0.59
SMPD4-214ENST00000455548 MEIS2O14770 477 aa18.7■□□□□ 0.58
SMPD4-214ENST00000455548 STAM2O75886 525 aa18.7■□□□□ 0.58
SMPD4-214ENST00000455548 ARIH2O95376 493 aa18.7■□□□□ 0.58
SMPD4-214ENST00000455548 PTGS1P23219 599 aa18.7■□□□□ 0.58
SMPD4-214ENST00000455548 TLE2Q04725 743 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms