RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 SUPT20HQ8NEM7 779 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 NETO1Q8TDF5 533 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 GPBAR1Q8TDU6 330 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 RPGRQ92834 1020 aaKnown RBP4.92□□□□□ -1.62
RBM39-220ENST00000455343 ISL2Q96A47 359 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 RBM17Q96I25 401 aaKnown RBP4.92□□□□□ -1.62
RBM39-220ENST00000455343 PHACTR3Q96KR7 559 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 EMILIN2Q9BXX0 1053 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 GBA2Q9HCG7 927 aaPredicted RBP4.92□□□□□ -1.62
RBM39-220ENST00000455343 CACNA2D2Q9NY47 1150 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 CNOT7Q9UIV1 285 aaKnown RBP4.92□□□□□ -1.62
RBM39-220ENST00000455343 PCOLCE2Q9UKZ9 415 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 H7C1D1 291 aa4.91□□□□□ -1.62
RBM39-220ENST00000455343 BBOX1O75936 387 aa4.91□□□□□ -1.62
RBM39-220ENST00000455343 RAD17O75943 681 aa4.91□□□□□ -1.62
RBM39-220ENST00000455343 BRD1O95696 1058 aa4.91□□□□□ -1.62
RBM39-220ENST00000455343 FXR1P51114 621 aaKnown RBP eCLIP4.91□□□□□ -1.62
RBM39-220ENST00000455343 PLCB3Q01970 1234 aa4.91□□□□□ -1.62
RBM39-220ENST00000455343 BNIP3Q12983 259 aa4.91□□□□□ -1.62
RBM39-220ENST00000455343 TNIP1Q15025 636 aa4.91□□□□□ -1.62
RBM39-220ENST00000455343 KRT26Q7Z3Y9 468 aa4.91□□□□□ -1.62
RBM39-220ENST00000455343 SP8Q8IXZ3 490 aa4.91□□□□□ -1.62
RBM39-220ENST00000455343 C2orf69Q8N8R5 385 aa4.91□□□□□ -1.62
RBM39-220ENST00000455343 RNF214Q8ND24 703 aa4.91□□□□□ -1.62
RBM39-220ENST00000455343 NECAB3Q96P71 396 aaPredicted RBP4.91□□□□□ -1.62
RBM39-220ENST00000455343 DUSP23Q9BVJ7 150 aa4.91□□□□□ -1.62
RBM39-220ENST00000455343 BCL2L13Q9BXK5 485 aa4.91□□□□□ -1.62
RBM39-220ENST00000455343 MKNK2Q9HBH9 465 aa4.91□□□□□ -1.62
RBM39-220ENST00000455343 MAP3K15Q6ZN16 1313 aa4.91□□□□□ -1.62
RBM39-220ENST00000455343 CENPFP49454 3210 aa4.91□□□□□ -1.62
RBM39-220ENST00000455343 BCORQ6W2J9 1755 aa4.91□□□□□ -1.62
RBM39-220ENST00000455343 COL3A1P02461 1466 aaPredicted RBP4.9□□□□□ -1.62
RBM39-220ENST00000455343 TCERG1O14776 1098 aaKnown RBP4.9□□□□□ -1.63
RBM39-220ENST00000455343 CEACAM5P06731 702 aa4.9□□□□□ -1.63
RBM39-220ENST00000455343 HSPA5P11021 654 aaKnown RBP4.9□□□□□ -1.63
RBM39-220ENST00000455343 FUT4P22083 530 aa4.9□□□□□ -1.63
RBM39-220ENST00000455343 OXCT1P55809 520 aa4.9□□□□□ -1.63
RBM39-220ENST00000455343 PRKCQQ04759 706 aa4.9□□□□□ -1.63
RBM39-220ENST00000455343 FBXO46Q6PJ61 603 aaPredicted RBP4.9□□□□□ -1.63
RBM39-220ENST00000455343 DPP8Q6V1X1 898 aaPredicted RBP4.9□□□□□ -1.63
RBM39-220ENST00000455343 TTLL7Q6ZT98 887 aa4.9□□□□□ -1.63
RBM39-220ENST00000455343 ERICH6Q7L0X2 663 aa4.9□□□□□ -1.63
RBM39-220ENST00000455343 LRP10Q7Z4F1 713 aa4.9□□□□□ -1.63
RBM39-220ENST00000455343 TOP6BLQ8N6T0 577 aa4.9□□□□□ -1.63
RBM39-220ENST00000455343 FBF1Q8TES7 1133 aa4.9□□□□□ -1.63
RBM39-220ENST00000455343 ZNF296Q8WUU4 475 aaPredicted RBP4.9□□□□□ -1.63
RBM39-220ENST00000455343 VAV3Q9UKW4 847 aa4.9□□□□□ -1.63
RBM39-220ENST00000455343 ABCC4O15439 1325 aa4.9□□□□□ -1.63
RBM39-220ENST00000455343 CACNA1SQ13698 1873 aa4.9□□□□□ -1.63
RBM39-220ENST00000455343 RANBP2P49792 3224 aaKnown RBP4.89□□□□□ -1.63
RBM39-220ENST00000455343 CASP8AP2Q9UKL3 1982 aa4.89□□□□□ -1.63
RBM39-220ENST00000455343 KRTAP4-8A0A0G2JLE6 195 aa4.89□□□□□ -1.63
RBM39-220ENST00000455343 ADM5C9JUS6 153 aa4.89□□□□□ -1.63
RBM39-220ENST00000455343 PSMD14O00487 310 aa4.89□□□□□ -1.63
RBM39-220ENST00000455343 ENC1O14682 589 aa4.89□□□□□ -1.63
RBM39-220ENST00000455343 HTATSF1O43719 755 aaKnown RBP4.89□□□□□ -1.63
RBM39-220ENST00000455343 CD8BP10966 210 aa4.89□□□□□ -1.63
RBM39-220ENST00000455343 GPTP24298 496 aa4.89□□□□□ -1.63
RBM39-220ENST00000455343 RPS12P25398 132 aaKnown RBP4.89□□□□□ -1.63
RBM39-220ENST00000455343 GSTT1P30711 240 aa4.89□□□□□ -1.63
RBM39-220ENST00000455343 PRKAR2BP31323 418 aa4.89□□□□□ -1.63
RBM39-220ENST00000455343 NTF4P34130 210 aa4.89□□□□□ -1.63
RBM39-220ENST00000455343 TM4SF4P48230 202 aa4.89□□□□□ -1.63
RBM39-220ENST00000455343 FKBP1BP68106 108 aa4.89□□□□□ -1.63
RBM39-220ENST00000455343 TAF7Q15545 349 aaPredicted RBP4.89□□□□□ -1.63
RBM39-220ENST00000455343 IFI16Q16666 785 aaKnown RBP4.89□□□□□ -1.63
RBM39-220ENST00000455343 TBC1D10BQ4KMP7 808 aaPredicted RBP4.89□□□□□ -1.63
RBM39-220ENST00000455343 PARP10Q53GL7 1025 aa4.89□□□□□ -1.63
RBM39-220ENST00000455343 MCM10Q7L590 875 aa4.89□□□□□ -1.63
RBM39-220ENST00000455343 RASAL3Q86YV0 1011 aa4.89□□□□□ -1.63
RBM39-220ENST00000455343 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.89□□□□□ -1.63
RBM39-220ENST00000455343 POU5F2Q8N7G0 328 aa4.89□□□□□ -1.63
RBM39-220ENST00000455343 DCPSQ96C86 337 aaKnown RBP4.89□□□□□ -1.63
RBM39-220ENST00000455343 SRCIN1Q9C0H9 1055 aa4.89□□□□□ -1.63
RBM39-220ENST00000455343 TMX4Q9H1E5 349 aaPredicted RBP4.89□□□□□ -1.63
RBM39-220ENST00000455343 CBX8Q9HC52 389 aa4.89□□□□□ -1.63
RBM39-220ENST00000455343 SSU72Q9NP77 194 aaKnown RBP4.89□□□□□ -1.63
RBM39-220ENST00000455343 PPM1HQ9ULR3 514 aa4.89□□□□□ -1.63
RBM39-220ENST00000455343 PLAGL2Q9UPG8 496 aa4.89□□□□□ -1.63
RBM39-220ENST00000455343 U2SURPO15042 1029 aaKnown RBP4.88□□□□□ -1.63
RBM39-220ENST00000455343 PAGE1O75459 146 aa4.88□□□□□ -1.63
RBM39-220ENST00000455343 TBC1D8O95759 1140 aa4.88□□□□□ -1.63
RBM39-220ENST00000455343 VIL1P09327 827 aaKnown RBP4.88□□□□□ -1.63
RBM39-220ENST00000455343 BMP6P22004 513 aa4.88□□□□□ -1.63
RBM39-220ENST00000455343 CD96P40200 585 aa4.88□□□□□ -1.63
RBM39-220ENST00000455343 MAPK8P45983 427 aa4.88□□□□□ -1.63
RBM39-220ENST00000455343 ZNF280AP59817 542 aaPredicted RBP4.88□□□□□ -1.63
RBM39-220ENST00000455343 EIF4A1P60842 406 aaKnown RBP4.88□□□□□ -1.63
RBM39-220ENST00000455343 GRAPQ13588 217 aa4.88□□□□□ -1.63
RBM39-220ENST00000455343 DCTN1Q14203 1278 aa4.88□□□□□ -1.63
RBM39-220ENST00000455343 PPM1JQ5JR12 505 aa4.88□□□□□ -1.63
RBM39-220ENST00000455343 TMC4Q7Z404 712 aa4.88□□□□□ -1.63
RBM39-220ENST00000455343 PPP1R42Q7Z4L9 355 aa4.88□□□□□ -1.63
RBM39-220ENST00000455343 NGEFQ8N5V2 710 aa4.88□□□□□ -1.63
RBM39-220ENST00000455343 GRAPLQ8TC17 118 aaPredicted RBP4.88□□□□□ -1.63
RBM39-220ENST00000455343 GRIN3AQ8TCU5 1115 aa4.88□□□□□ -1.63
RBM39-220ENST00000455343 CDCA5Q96FF9 252 aa4.88□□□□□ -1.63
RBM39-220ENST00000455343 HRASLS5Q96KN8 279 aa4.88□□□□□ -1.63
RBM39-220ENST00000455343 OSBPL7Q9BZF2 842 aa4.88□□□□□ -1.63
RBM39-220ENST00000455343 CEP44Q9C0F1 390 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms