RNA–Protein interactions for RNA: ENST00000454608.3

USP41-202, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS P5 TSL 5 BASIC

Gene USP41, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-202ENST00000454608 DEFB103AP81534 67 aa12.36□□□□□ -0.43
USP41-202ENST00000454608 PDE4BQ07343 736 aa12.36□□□□□ -0.43
USP41-202ENST00000454608 PPP2R5BQ15173 497 aa12.36□□□□□ -0.43
USP41-202ENST00000454608 PTGISQ16647 500 aa12.36□□□□□ -0.43
USP41-202ENST00000454608 RCSD1Q6JBY9 416 aa12.36□□□□□ -0.43
USP41-202ENST00000454608 MFSD14AQ96MC6 490 aa12.36□□□□□ -0.43
USP41-202ENST00000454608 CRBNQ96SW2 442 aa12.36□□□□□ -0.43
USP41-202ENST00000454608 UPF3BQ9BZI7 483 aaKnown RBP12.36□□□□□ -0.43
USP41-202ENST00000454608 MTUS1Q9ULD2 1270 aa12.36□□□□□ -0.43
USP41-202ENST00000454608 PRR12Q9ULL5 1215 aa12.36□□□□□ -0.43
USP41-202ENST00000454608 MICAL3Q7RTP6 2002 aa12.35□□□□□ -0.43
USP41-202ENST00000454608 PRDM1O75626 825 aa12.35□□□□□ -0.43
USP41-202ENST00000454608 ICAM1P05362 532 aa12.35□□□□□ -0.43
USP41-202ENST00000454608 MCCP23508 829 aa12.35□□□□□ -0.43
USP41-202ENST00000454608 TDO2P48775 406 aa12.35□□□□□ -0.43
USP41-202ENST00000454608 RBL2Q08999 1139 aa12.35□□□□□ -0.43
USP41-202ENST00000454608 IKBKEQ14164 716 aa12.35□□□□□ -0.43
USP41-202ENST00000454608 PTPROQ16827 1216 aa12.35□□□□□ -0.43
USP41-202ENST00000454608 LRRC8DQ7L1W4 858 aa12.35□□□□□ -0.43
USP41-202ENST00000454608 SESTD1Q86VW0 696 aa12.35□□□□□ -0.43
USP41-202ENST00000454608 FBXO22Q8NEZ5 403 aa12.35□□□□□ -0.43
USP41-202ENST00000454608 SCFD2Q8WU76 684 aa12.35□□□□□ -0.43
USP41-202ENST00000454608 MRPL38Q96DV4 380 aaKnown RBP12.35□□□□□ -0.43
USP41-202ENST00000454608 SAMD11Q96NU1 681 aa12.35□□□□□ -0.43
USP41-202ENST00000454608 NLRC5Q86WI3 1866 aa12.35□□□□□ -0.43
USP41-202ENST00000454608 B4DLN1 442 aa12.34□□□□□ -0.43
USP41-202ENST00000454608 SLC3A2P08195 630 aaKnown RBP12.34□□□□□ -0.43
USP41-202ENST00000454608 MRPL12P52815 198 aaKnown RBP12.34□□□□□ -0.43
USP41-202ENST00000454608 TFAP4Q01664 338 aa12.34□□□□□ -0.43
USP41-202ENST00000454608 BAATQ14032 418 aaPredicted RBP12.34□□□□□ -0.43
USP41-202ENST00000454608 GPNMBQ14956 572 aa12.34□□□□□ -0.43
USP41-202ENST00000454608 TIGD5Q53EQ6 642 aa12.34□□□□□ -0.43
USP41-202ENST00000454608 KCTD1Q719H9 257 aa12.34□□□□□ -0.43
USP41-202ENST00000454608 TMCO2Q7Z6W1 182 aaPredicted RBP12.34□□□□□ -0.43
USP41-202ENST00000454608 APPBP2Q92624 585 aa12.34□□□□□ -0.43
USP41-202ENST00000454608 PURBQ96QR8 312 aaKnown RBP12.34□□□□□ -0.43
USP41-202ENST00000454608 PNMA2Q9UL42 364 aa12.34□□□□□ -0.43
USP41-202ENST00000454608 INSL6Q9Y581 213 aa12.34□□□□□ -0.43
USP41-202ENST00000454608 RALGAPA2Q2PPJ7 1873 aa12.34□□□□□ -0.43
USP41-202ENST00000454608 KIAA1217Q5T5P2 1943 aa12.33□□□□□ -0.44
USP41-202ENST00000454608 C19orf67A6NJJ6 358 aa12.33□□□□□ -0.44
USP41-202ENST00000454608 APPP05067 770 aa12.33□□□□□ -0.44
USP41-202ENST00000454608 ZP2Q05996 745 aa12.33□□□□□ -0.44
USP41-202ENST00000454608 PDE4DQ08499 809 aa12.33□□□□□ -0.44
USP41-202ENST00000454608 DNERQ8NFT8 737 aa12.33□□□□□ -0.44
USP41-202ENST00000454608 PABPC5Q96DU9 382 aaKnown RBP12.33□□□□□ -0.44
USP41-202ENST00000454608 NACAP1Q9BZK3 213 aa12.33□□□□□ -0.44
USP41-202ENST00000454608 BCL11AQ9H165 835 aa12.33□□□□□ -0.44
USP41-202ENST00000454608 RANBP17Q9H2T7 1088 aaKnown RBP12.33□□□□□ -0.44
USP41-202ENST00000454608 EPB41L4AQ9HCS5 686 aaPredicted RBP12.33□□□□□ -0.44
USP41-202ENST00000454608 PTPDC1A2A3K4 754 aa12.32□□□□□ -0.44
USP41-202ENST00000454608 PATL2C9JE40 543 aaKnown RBP12.32□□□□□ -0.44
USP41-202ENST00000454608 GPAA1O43292 621 aa12.32□□□□□ -0.44
USP41-202ENST00000454608 NCK2O43639 380 aa12.32□□□□□ -0.44
USP41-202ENST00000454608 ST18O60284 1047 aa12.32□□□□□ -0.44
USP41-202ENST00000454608 NBNO60934 754 aa12.32□□□□□ -0.44
USP41-202ENST00000454608 ZFYP08048 801 aaPredicted RBP12.32□□□□□ -0.44
USP41-202ENST00000454608 TXNP10599 105 aaKnown RBP12.32□□□□□ -0.44
USP41-202ENST00000454608 CKBP12277 381 aa12.32□□□□□ -0.44
USP41-202ENST00000454608 EDNRBP24530 442 aa12.32□□□□□ -0.44
USP41-202ENST00000454608 SNAP25P60880 206 aa12.32□□□□□ -0.44
USP41-202ENST00000454608 GDF6Q6KF10 455 aaPredicted RBP12.32□□□□□ -0.44
USP41-202ENST00000454608 RNF207Q6ZRF8 634 aa12.32□□□□□ -0.44
USP41-202ENST00000454608 ADHFE1Q8IWW8 467 aa12.32□□□□□ -0.44
USP41-202ENST00000454608 IFNL3Q8IZI9 196 aa12.32□□□□□ -0.44
USP41-202ENST00000454608 KBTBD3Q8NAB2 608 aa12.32□□□□□ -0.44
USP41-202ENST00000454608 OSBP2Q969R2 916 aa12.32□□□□□ -0.44
USP41-202ENST00000454608 CTAGE1Q96RT6 745 aa12.32□□□□□ -0.44
USP41-202ENST00000454608 PRRX2Q99811 253 aa12.32□□□□□ -0.44
USP41-202ENST00000454608 STX8Q9UNK0 236 aa12.32□□□□□ -0.44
USP41-202ENST00000454608 H3BQ06 376 aaPredicted RBP12.31□□□□□ -0.44
USP41-202ENST00000454608 NFIBO00712 420 aa12.31□□□□□ -0.44
USP41-202ENST00000454608 AMHP03971 560 aa12.31□□□□□ -0.44
USP41-202ENST00000454608 CASTP20810 708 aaKnown RBP12.31□□□□□ -0.44
USP41-202ENST00000454608 CHMP4BP1P59074 171 aa12.31□□□□□ -0.44
USP41-202ENST00000454608 HTRA4P83105 476 aaPredicted RBP12.31□□□□□ -0.44
USP41-202ENST00000454608 COL19A1Q14993 1142 aa12.31□□□□□ -0.44
USP41-202ENST00000454608 PKN1Q16512 942 aa12.31□□□□□ -0.44
USP41-202ENST00000454608 BTNL9Q6UXG8 535 aa12.31□□□□□ -0.44
USP41-202ENST00000454608 HFE2Q6ZVN8 426 aa12.31□□□□□ -0.44
USP41-202ENST00000454608 BANK1Q8NDB2 785 aa12.31□□□□□ -0.44
USP41-202ENST00000454608 SP7Q8TDD2 431 aaPredicted RBP12.31□□□□□ -0.44
USP41-202ENST00000454608 PPP1R13LQ8WUF5 828 aa12.31□□□□□ -0.44
USP41-202ENST00000454608 DCAF4Q8WV16 495 aa12.31□□□□□ -0.44
USP41-202ENST00000454608 DHX38Q92620 1227 aaKnown RBP12.31□□□□□ -0.44
USP41-202ENST00000454608 COPS5Q92905 334 aa12.31□□□□□ -0.44
USP41-202ENST00000454608 POP1Q99575 1024 aaKnown RBP12.31□□□□□ -0.44
USP41-202ENST00000454608 C17orf80Q9BSJ5 609 aa12.31□□□□□ -0.44
USP41-202ENST00000454608 COL4A6Q14031 1691 aa12.31□□□□□ -0.44
USP41-202ENST00000454608 WDFY4Q6ZS81 3184 aa12.31□□□□□ -0.44
USP41-202ENST00000454608 MYH7BA7E2Y1 1941 aa12.31□□□□□ -0.44
USP41-202ENST00000454608 H3BNC9 293 aa12.3□□□□□ -0.44
USP41-202ENST00000454608 RNF113AO15541 343 aaKnown RBP12.3□□□□□ -0.44
USP41-202ENST00000454608 MMP3P08254 477 aa12.3□□□□□ -0.44
USP41-202ENST00000454608 MS4A1P11836 297 aa12.3□□□□□ -0.44
USP41-202ENST00000454608 CALML3P27482 149 aa12.3□□□□□ -0.44
USP41-202ENST00000454608 PTPN5P54829 565 aa12.3□□□□□ -0.44
USP41-202ENST00000454608 PTK7Q13308 1070 aa12.3□□□□□ -0.44
USP41-202ENST00000454608 FAM117BQ6P1L5 589 aa12.3□□□□□ -0.44
USP41-202ENST00000454608 BMP8AQ7Z5Y6 402 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms