RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 MAP3K2Q9Y2U5 619 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 HYOU1Q9Y4L1 999 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 EID1Q9Y6B2 187 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 ZSCAN5CA6NGD5 496 aaPredicted RBP9.51□□□□□ -0.89
LSM5-208ENST00000450169 KCNJ18B7U540 433 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 F8W031 263 aaPredicted RBP9.51□□□□□ -0.89
LSM5-208ENST00000450169 ORC4O43929 436 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 COBLO75128 1261 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 ANXA1P04083 346 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 MYBL1P10243 752 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 ATP2A2P16615 1042 aaKnown RBP9.51□□□□□ -0.89
LSM5-208ENST00000450169 CXCR5P32302 372 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 MAP3K12Q12852 859 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 CUL3Q13618 768 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 KCNJ12Q14500 433 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 MEA1Q16626 185 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 CCDC57Q2TAC2 916 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 APLFQ8IW19 511 aaPredicted RBP9.51□□□□□ -0.89
LSM5-208ENST00000450169 ADAMTS19Q8TE59 1207 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 TEKT4Q8WW24 435 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 MOV10L1Q9BXT6 1211 aaKnown RBP9.51□□□□□ -0.89
LSM5-208ENST00000450169 OCEL1Q9H607 264 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 PLCB1Q9NQ66 1216 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 CAPN6Q9Y6Q1 641 aa9.51□□□□□ -0.89
LSM5-208ENST00000450169 BCL9LQ86UU0 1499 aa9.5□□□□□ -0.89
LSM5-208ENST00000450169 EIF4E1BA6NMX2 242 aaKnown RBP9.5□□□□□ -0.89
LSM5-208ENST00000450169 GRM8O00222 908 aa9.5□□□□□ -0.89
LSM5-208ENST00000450169 ZSCAN9O15535 394 aaPredicted RBP9.5□□□□□ -0.89
LSM5-208ENST00000450169 CNGA1P29973 690 aa9.5□□□□□ -0.89
LSM5-208ENST00000450169 HSPA9P38646 679 aaKnown RBP9.5□□□□□ -0.89
LSM5-208ENST00000450169 AFMP43652 599 aa9.5□□□□□ -0.89
LSM5-208ENST00000450169 PIP4K2AP48426 406 aaPredicted RBP9.5□□□□□ -0.89
LSM5-208ENST00000450169 CCNG1P51959 295 aa9.5□□□□□ -0.89
LSM5-208ENST00000450169 TAF11Q15544 211 aa9.5□□□□□ -0.89
LSM5-208ENST00000450169 IFI16Q16666 785 aaKnown RBP9.5□□□□□ -0.89
LSM5-208ENST00000450169 ERICH1Q86X53 443 aa9.5□□□□□ -0.89
LSM5-208ENST00000450169 ATL2Q8NHH9 583 aa9.5□□□□□ -0.89
LSM5-208ENST00000450169 SMCR8Q8TEV9 937 aaPredicted RBP9.5□□□□□ -0.89
LSM5-208ENST00000450169 CHMP6Q96FZ7 201 aa9.5□□□□□ -0.89
LSM5-208ENST00000450169 NAF1Q96HR8 494 aaKnown RBP9.5□□□□□ -0.89
LSM5-208ENST00000450169 ANKRD27Q96NW4 1050 aa9.5□□□□□ -0.89
LSM5-208ENST00000450169 PLEKHG4BQ96PX9 1271 aa9.5□□□□□ -0.89
LSM5-208ENST00000450169 GSDMAQ96QA5 445 aa9.5□□□□□ -0.89
LSM5-208ENST00000450169 NHEJ1Q9H9Q4 299 aaPredicted RBP9.5□□□□□ -0.89
LSM5-208ENST00000450169 ANKIB1Q9P2G1 1089 aa9.5□□□□□ -0.89
LSM5-208ENST00000450169 CAPN11Q9UMQ6 739 aa9.5□□□□□ -0.89
LSM5-208ENST00000450169 PCDHGA4Q9Y5G9 962 aa9.5□□□□□ -0.89
LSM5-208ENST00000450169 MYO5AQ9Y4I1 1855 aaKnown RBP9.5□□□□□ -0.89
LSM5-208ENST00000450169 RGPD8O14715 1765 aaPredicted RBP9.5□□□□□ -0.89
LSM5-208ENST00000450169 PALLDQ8WX93 1383 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 C4AP0C0L4 1744 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 C4BP0C0L5 1744 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 GPR75-ASB3A0A0A6YYF3 556 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 GOLGA6L10A0A0M3HER8 536 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 A0A1B0GVG6 124 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 ABLIM1O14639 778 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 NPTXRO95502 500 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 ALDH3A1P30838 453 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 CYP27A1Q02318 531 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 DPYDQ12882 1025 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 SEPT2Q15019 361 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 CCDC96Q2M329 555 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 TNNI3KQ59H18 835 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 RUFY4Q6ZNE9 571 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 SDCCAG8Q86SQ7 713 aaPredicted RBP9.49□□□□□ -0.89
LSM5-208ENST00000450169 SPICE1Q8N0Z3 855 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 TRIM4Q9C037 500 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 ZCWPW1Q9H0M4 648 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 ZNHIT6Q9NWK9 470 aaKnown RBP9.49□□□□□ -0.89
LSM5-208ENST00000450169 AMOTL2Q9Y2J4 779 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 C2CD2Q9Y426 696 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 ASB3Q9Y575 518 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 FPGT-TNNI3KV9GXZ4 949 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 ADAMTSL3P82987 1691 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 IGSF1Q8N6C5 1336 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 HOXB7P09629 217 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 NQO1P15559 274 aaKnown RBP9.49□□□□□ -0.89
LSM5-208ENST00000450169 CASP1P29466 404 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 ALDH5A1P51649 535 aaPredicted RBP9.49□□□□□ -0.89
LSM5-208ENST00000450169 KCNJ2P63252 427 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 MRPS35P82673 323 aaKnown RBP9.49□□□□□ -0.89
LSM5-208ENST00000450169 ZNF844Q08AG5 666 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 ITIH4Q14624 930 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 FAM133BQ5BKY9 247 aaKnown RBP9.49□□□□□ -0.89
LSM5-208ENST00000450169 NUGGCQ68CJ6 796 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 TRIM68Q6AZZ1 485 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 USP49Q70CQ1 688 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 NOSTRINQ8IVI9 506 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 THEMISQ8N1K5 641 aaPredicted RBP9.49□□□□□ -0.89
LSM5-208ENST00000450169 CASKIN2Q8WXE0 1202 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 MMTAG2Q9BU76 263 aaKnown RBP9.49□□□□□ -0.89
LSM5-208ENST00000450169 PIDD1Q9HB75 910 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 WDR35Q9P2L0 1181 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 DBF4Q9UBU7 674 aaPredicted RBP9.49□□□□□ -0.89
LSM5-208ENST00000450169 LRWD1Q9UFC0 647 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 CNOT8Q9UFF9 292 aaKnown RBP9.49□□□□□ -0.89
LSM5-208ENST00000450169 RWDD2AQ9UIY3 292 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 DIP2AQ14689 1571 aa9.49□□□□□ -0.89
LSM5-208ENST00000450169 USO1O60763 962 aaKnown RBP9.48□□□□□ -0.89
LSM5-208ENST00000450169 HSD17B3P37058 310 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms