RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 Q9Y3F1 56 aa15.05■□□□□ -0
SNRNP27-203ENST00000450162 MYH6P13533 1939 aa15.05■□□□□ -0
SNRNP27-203ENST00000450162 DNM1LO00429 736 aa15.04■□□□□ -0
SNRNP27-203ENST00000450162 CDKL5O76039 1030 aa15.04■□□□□ -0
SNRNP27-203ENST00000450162 NTRK3Q16288 839 aa15.04■□□□□ -0
SNRNP27-203ENST00000450162 PFKFB3Q16875 520 aaPredicted RBP15.04■□□□□ -0
SNRNP27-203ENST00000450162 CCDC144BQ3MJ40 725 aa15.04■□□□□ -0
SNRNP27-203ENST00000450162 HEATR3Q7Z4Q2 680 aa15.04■□□□□ -0
SNRNP27-203ENST00000450162 TRIM22Q8IYM9 498 aa15.04■□□□□ -0
SNRNP27-203ENST00000450162 FAM177A1Q8N128 213 aaPredicted RBP15.04■□□□□ -0
SNRNP27-203ENST00000450162 CCDC12Q8WUD4 166 aaPredicted RBP15.04■□□□□ -0
SNRNP27-203ENST00000450162 PURBQ96QR8 312 aaKnown RBP15.04■□□□□ -0
SNRNP27-203ENST00000450162 HTATIP2Q9BUP3 242 aa15.04■□□□□ -0
SNRNP27-203ENST00000450162 SLKQ9H2G2 1235 aaPredicted RBP15.04■□□□□ -0
SNRNP27-203ENST00000450162 SPC25Q9HBM1 224 aa15.04■□□□□ -0
SNRNP27-203ENST00000450162 XPNPEP3Q9NQH7 507 aa15.04■□□□□ -0
SNRNP27-203ENST00000450162 PXMP2Q9NR77 195 aa15.04■□□□□ -0
SNRNP27-203ENST00000450162 BARHL2Q9NY43 387 aa15.04■□□□□ -0
SNRNP27-203ENST00000450162 RBM47A0AV96 593 aaKnown RBP15.03■□□□□ -0
SNRNP27-203ENST00000450162 EIF3JO75822 258 aaKnown RBP15.03■□□□□ -0
SNRNP27-203ENST00000450162 NR3C2P08235 984 aa15.03■□□□□ -0
SNRNP27-203ENST00000450162 SCG2P13521 617 aa15.03■□□□□ -0
SNRNP27-203ENST00000450162 AK2P54819 239 aa15.03■□□□□ -0
SNRNP27-203ENST00000450162 CCT2P78371 535 aaKnown RBP15.03■□□□□ -0
SNRNP27-203ENST00000450162 TNFAIP2Q03169 654 aa15.03■□□□□ -0
SNRNP27-203ENST00000450162 MCTP2Q6DN12 878 aa15.03■□□□□ -0
SNRNP27-203ENST00000450162 TAPT1Q6NXT6 567 aa15.03■□□□□ -0
SNRNP27-203ENST00000450162 XRRA1Q6P2D8 792 aa15.03■□□□□ -0
SNRNP27-203ENST00000450162 RNF180Q86T96 592 aa15.03■□□□□ -0
SNRNP27-203ENST00000450162 SMARCC2Q8TAQ2 1214 aa15.03■□□□□ -0
SNRNP27-203ENST00000450162 SCFD2Q8WU76 684 aa15.03■□□□□ -0
SNRNP27-203ENST00000450162 COL20A1Q9P218 1284 aa15.03■□□□□ -0
SNRNP27-203ENST00000450162 hCG_1642624A0A1W2PR95 340 aa15.02■□□□□ -0
SNRNP27-203ENST00000450162 KBTBD13C9JR72 458 aa15.02■□□□□ -0
SNRNP27-203ENST00000450162 MEIS2O14770 477 aa15.02■□□□□ -0
SNRNP27-203ENST00000450162 NKRFO15226 690 aaKnown RBP eCLIP15.02■□□□□ -0
SNRNP27-203ENST00000450162 PFKFB2O60825 505 aa15.02■□□□□ -0
SNRNP27-203ENST00000450162 STAM2O75886 525 aa15.02■□□□□ -0
SNRNP27-203ENST00000450162 HOXA13P31271 388 aaPredicted RBP15.02■□□□□ -0
SNRNP27-203ENST00000450162 NAPAP54920 295 aa15.02■□□□□ -0
SNRNP27-203ENST00000450162 NKX3-2P78367 333 aa15.02■□□□□ -0
SNRNP27-203ENST00000450162 SSRP1Q08945 709 aaKnown RBP15.02■□□□□ -0
SNRNP27-203ENST00000450162 WWC2Q6AWC2 1192 aa15.02■□□□□ -0
SNRNP27-203ENST00000450162 KCNV1Q6PIU1 500 aa15.02■□□□□ -0
SNRNP27-203ENST00000450162 PDCD2LQ9BRP1 358 aa15.02■□□□□ -0
SNRNP27-203ENST00000450162 TSEN34Q9BSV6 310 aaKnown RBP15.02■□□□□ -0
SNRNP27-203ENST00000450162 TPCN1Q9ULQ1 816 aa15.02■□□□□ -0
SNRNP27-203ENST00000450162 ESYT2A0FGR8 921 aa15.01□□□□□ -0.01
SNRNP27-203ENST00000450162 FOSP01100 380 aaPredicted RBP15.01□□□□□ -0.01
SNRNP27-203ENST00000450162 CST5P28325 142 aaPredicted RBP15.01□□□□□ -0.01
SNRNP27-203ENST00000450162 GJA9P57773 515 aa15.01□□□□□ -0.01
SNRNP27-203ENST00000450162 TTLL4Q14679 1199 aa15.01□□□□□ -0.01
SNRNP27-203ENST00000450162 DUSP28Q4G0W2 176 aa15.01□□□□□ -0.01
SNRNP27-203ENST00000450162 EEPD1Q7L9B9 569 aa15.01□□□□□ -0.01
SNRNP27-203ENST00000450162 VSIG10LQ86VR7 867 aa15.01□□□□□ -0.01
SNRNP27-203ENST00000450162 FCHSD1Q86WN1 690 aa15.01□□□□□ -0.01
SNRNP27-203ENST00000450162 FBXO16Q8IX29 292 aaPredicted RBP15.01□□□□□ -0.01
SNRNP27-203ENST00000450162 PCSK9Q8NBP7 692 aaKnown RBP15.01□□□□□ -0.01
SNRNP27-203ENST00000450162 GPKOWQ92917 476 aaPredicted RBP eCLIP15.01□□□□□ -0.01
SNRNP27-203ENST00000450162 PAWRQ96IZ0 340 aaKnown RBP15.01□□□□□ -0.01
SNRNP27-203ENST00000450162 WDR11Q9BZH6 1224 aa15.01□□□□□ -0.01
SNRNP27-203ENST00000450162 UPF3AQ9H1J1 476 aaKnown RBP15.01□□□□□ -0.01
SNRNP27-203ENST00000450162 C11orf49Q9H6J7 331 aa15.01□□□□□ -0.01
SNRNP27-203ENST00000450162 EHMT1Q9H9B1 1298 aa15.01□□□□□ -0.01
SNRNP27-203ENST00000450162 NCOA5Q9HCD5 579 aaKnown RBP15.01□□□□□ -0.01
SNRNP27-203ENST00000450162 RIC8AQ9NPQ8 531 aa15.01□□□□□ -0.01
SNRNP27-203ENST00000450162 SH3GLB2Q9NR46 395 aa15.01□□□□□ -0.01
SNRNP27-203ENST00000450162 GNEQ9Y223 722 aaKnown RBP15.01□□□□□ -0.01
SNRNP27-203ENST00000450162 FRMPD4Q14CM0 1322 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 SMCO2A6NFE2 343 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 SPDYE3A6NKU9 549 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 STXBP3O00186 592 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 ADAMTS4O75173 837 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 DEXIO95424 95 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 TGFB3P10600 412 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 COL6A1P12109 1028 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 EIF2AK2P19525 551 aaKnown RBP15□□□□□ -0.01
SNRNP27-203ENST00000450162 GNA11P29992 359 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 CCND2P30279 289 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 ADCYAP1R1P41586 468 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 MNX1P50219 401 aaPredicted RBP15□□□□□ -0.01
SNRNP27-203ENST00000450162 STK3Q13188 491 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 PGM5Q15124 567 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 RABEP1Q15276 862 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 LRRC41Q15345 812 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 PKN1Q16512 942 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 ANO1Q5XXA6 986 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 USP17L6PQ6QN14 398 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 NOL8Q76FK4 1167 aaKnown RBP15□□□□□ -0.01
SNRNP27-203ENST00000450162 CCDC148Q8NFR7 591 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 PHKBQ93100 1093 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 SLC26A6Q9BXS9 759 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 ZMYND12Q9H0C1 365 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 AP5M1Q9H0R1 490 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 C6orf50Q9HD87 102 aa15□□□□□ -0.01
SNRNP27-203ENST00000450162 MOXD2PA6NHM9 499 aa14.99□□□□□ -0.01
SNRNP27-203ENST00000450162 ZEB2O60315 1214 aa14.99□□□□□ -0.01
SNRNP27-203ENST00000450162 SMPD1P17405 629 aa14.99□□□□□ -0.01
SNRNP27-203ENST00000450162 ADCY7P51828 1080 aa14.99□□□□□ -0.01
SNRNP27-203ENST00000450162 SCRN1Q12765 414 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms