RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 LRRCC1Q9C099 1032 aa16.22■□□□□ 0.19
CPSF7-207ENST00000449811 ECHDC1Q9NTX5 307 aa16.22■□□□□ 0.19
CPSF7-207ENST00000449811 ZBTB40Q9NUA8 1239 aa16.22■□□□□ 0.19
CPSF7-207ENST00000449811 TET1Q8NFU7 2136 aa16.21■□□□□ 0.19
CPSF7-207ENST00000449811 NFIBO00712 420 aa16.21■□□□□ 0.19
CPSF7-207ENST00000449811 SMARCA5O60264 1052 aaPredicted RBP16.21■□□□□ 0.19
CPSF7-207ENST00000449811 ZFYP08048 801 aaPredicted RBP16.21■□□□□ 0.19
CPSF7-207ENST00000449811 ERVK-21P61565 698 aa16.21■□□□□ 0.19
CPSF7-207ENST00000449811 DEFB103AP81534 67 aa16.21■□□□□ 0.19
CPSF7-207ENST00000449811 PTGISQ16647 500 aa16.21■□□□□ 0.19
CPSF7-207ENST00000449811 CSPP1Q1MSJ5 1256 aa16.21■□□□□ 0.19
CPSF7-207ENST00000449811 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.21■□□□□ 0.19
CPSF7-207ENST00000449811 TGS1Q96RS0 853 aaKnown RBP16.21■□□□□ 0.19
CPSF7-207ENST00000449811 RAD9AQ99638 391 aa16.21■□□□□ 0.19
CPSF7-207ENST00000449811 MTMR7Q9Y216 660 aa16.21■□□□□ 0.19
CPSF7-207ENST00000449811 PTPRSQ13332 1948 aa16.21■□□□□ 0.19
CPSF7-207ENST00000449811 GJB5O95377 273 aa16.2■□□□□ 0.18
CPSF7-207ENST00000449811 MS4A1P11836 297 aa16.2■□□□□ 0.18
CPSF7-207ENST00000449811 IL9P15248 144 aa16.2■□□□□ 0.18
CPSF7-207ENST00000449811 PPARAQ07869 468 aa16.2■□□□□ 0.18
CPSF7-207ENST00000449811 PDE4DQ08499 809 aa16.2■□□□□ 0.18
CPSF7-207ENST00000449811 GPNMBQ14956 572 aa16.2■□□□□ 0.18
CPSF7-207ENST00000449811 CCDC96Q2M329 555 aa16.2■□□□□ 0.18
CPSF7-207ENST00000449811 PTCRAQ6ISU1 281 aaPredicted RBP16.2■□□□□ 0.18
CPSF7-207ENST00000449811 CNKSR3Q6P9H4 555 aa16.2■□□□□ 0.18
CPSF7-207ENST00000449811 SLC30A10Q6XR72 485 aa16.2■□□□□ 0.18
CPSF7-207ENST00000449811 SCFD2Q8WU76 684 aa16.2■□□□□ 0.18
CPSF7-207ENST00000449811 COPS5Q92905 334 aa16.2■□□□□ 0.18
CPSF7-207ENST00000449811 MPHOSPH6Q99547 160 aaKnown RBP16.2■□□□□ 0.18
CPSF7-207ENST00000449811 RANBP17Q9H2T7 1088 aaKnown RBP16.2■□□□□ 0.18
CPSF7-207ENST00000449811 DDX19BQ9UMR2 479 aa16.2■□□□□ 0.18
CPSF7-207ENST00000449811 BRWD1Q9NSI6 2320 aa16.19■□□□□ 0.18
CPSF7-207ENST00000449811 TSPY2A6NKD2 308 aa16.19■□□□□ 0.18
CPSF7-207ENST00000449811 TXNP10599 105 aaKnown RBP16.19■□□□□ 0.18
CPSF7-207ENST00000449811 SELPP16109 830 aa16.19■□□□□ 0.18
CPSF7-207ENST00000449811 CALML3P27482 149 aa16.19■□□□□ 0.18
CPSF7-207ENST00000449811 LRRC8DQ7L1W4 858 aa16.19■□□□□ 0.18
CPSF7-207ENST00000449811 NAPBQ9H115 298 aa16.19■□□□□ 0.18
CPSF7-207ENST00000449811 IL17RBQ9NRM6 502 aa16.19■□□□□ 0.18
CPSF7-207ENST00000449811 ABHD14A-ACY1A0A1B0GW23 586 aa16.18■□□□□ 0.18
CPSF7-207ENST00000449811 LINC01553A4QN01 128 aa16.18■□□□□ 0.18
CPSF7-207ENST00000449811 GRXCR2A6NFK2 248 aa16.18■□□□□ 0.18
CPSF7-207ENST00000449811 NMT2O60551 498 aa16.18■□□□□ 0.18
CPSF7-207ENST00000449811 PARNO95453 639 aaKnown RBP16.18■□□□□ 0.18
CPSF7-207ENST00000449811 SLC16A2P36021 539 aa16.18■□□□□ 0.18
CPSF7-207ENST00000449811 RNF207Q6ZRF8 634 aa16.18■□□□□ 0.18
CPSF7-207ENST00000449811 DCAF4Q8WV16 495 aa16.18■□□□□ 0.18
CPSF7-207ENST00000449811 CTAGE1Q96RT6 745 aa16.18■□□□□ 0.18
CPSF7-207ENST00000449811 CRBNQ96SW2 442 aa16.18■□□□□ 0.18
CPSF7-207ENST00000449811 WDFY4Q6ZS81 3184 aa16.18■□□□□ 0.18
CPSF7-207ENST00000449811 DCXO43602 365 aa16.17■□□□□ 0.18
CPSF7-207ENST00000449811 NBNO60934 754 aa16.17■□□□□ 0.18
CPSF7-207ENST00000449811 CXCL10P02778 98 aa16.17■□□□□ 0.18
CPSF7-207ENST00000449811 EDNRBP24530 442 aa16.17■□□□□ 0.18
CPSF7-207ENST00000449811 NHLH1Q02575 133 aa16.17■□□□□ 0.18
CPSF7-207ENST00000449811 PUS10Q3MIT2 529 aaKnown RBP16.17■□□□□ 0.18
CPSF7-207ENST00000449811 SYDE2Q5VT97 1194 aa16.17■□□□□ 0.18
CPSF7-207ENST00000449811 TSHZ3Q63HK5 1081 aa16.17■□□□□ 0.18
CPSF7-207ENST00000449811 TTBK2Q6IQ55 1244 aa16.17■□□□□ 0.18
CPSF7-207ENST00000449811 GDF6Q6KF10 455 aaPredicted RBP16.17■□□□□ 0.18
CPSF7-207ENST00000449811 SESTD1Q86VW0 696 aa16.17■□□□□ 0.18
CPSF7-207ENST00000449811 CLEC4DQ8WXI8 215 aa16.17■□□□□ 0.18
CPSF7-207ENST00000449811 DHX38Q92620 1227 aaKnown RBP16.17■□□□□ 0.18
CPSF7-207ENST00000449811 GPATCH3Q96I76 525 aa16.17■□□□□ 0.18
CPSF7-207ENST00000449811 SEC62Q99442 399 aaKnown RBP16.17■□□□□ 0.18
CPSF7-207ENST00000449811 EFCAB14O75071 495 aa16.16■□□□□ 0.18
CPSF7-207ENST00000449811 ARIH2O95376 493 aa16.16■□□□□ 0.18
CPSF7-207ENST00000449811 CKBP12277 381 aa16.16■□□□□ 0.18
CPSF7-207ENST00000449811 RPS6P62753 249 aaKnown RBP16.16■□□□□ 0.18
CPSF7-207ENST00000449811 RBL2Q08999 1139 aa16.16■□□□□ 0.18
CPSF7-207ENST00000449811 TCTN1Q2MV58 587 aa16.16■□□□□ 0.18
CPSF7-207ENST00000449811 FAM117BQ6P1L5 589 aa16.16■□□□□ 0.18
CPSF7-207ENST00000449811 BTNL9Q6UXG8 535 aa16.16■□□□□ 0.18
CPSF7-207ENST00000449811 FBXO22Q8NEZ5 403 aa16.16■□□□□ 0.18
CPSF7-207ENST00000449811 DNERQ8NFT8 737 aa16.16■□□□□ 0.18
CPSF7-207ENST00000449811 AFG1LQ8WV93 481 aa16.16■□□□□ 0.18
CPSF7-207ENST00000449811 FBXL18Q96ME1 805 aa16.16■□□□□ 0.18
CPSF7-207ENST00000449811 KCNH6Q9H252 994 aa16.16■□□□□ 0.18
CPSF7-207ENST00000449811 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.16■□□□□ 0.18
CPSF7-207ENST00000449811 TRIP12Q14669 1992 aaPredicted RBP16.16■□□□□ 0.18
CPSF7-207ENST00000449811 SIP14410 1827 aa16.15■□□□□ 0.18
CPSF7-207ENST00000449811 B4DLN1 442 aa16.15■□□□□ 0.18
CPSF7-207ENST00000449811 MRPL12P52815 198 aaKnown RBP16.15■□□□□ 0.18
CPSF7-207ENST00000449811 CTDSPL2Q05D32 466 aa16.15■□□□□ 0.18
CPSF7-207ENST00000449811 IKBKEQ14164 716 aa16.15■□□□□ 0.18
CPSF7-207ENST00000449811 NEK9Q8TD19 979 aa16.15■□□□□ 0.18
CPSF7-207ENST00000449811 C17orf80Q9BSJ5 609 aa16.15■□□□□ 0.18
CPSF7-207ENST00000449811 CHMP4BQ9H444 224 aaKnown RBP16.15■□□□□ 0.18
CPSF7-207ENST00000449811 INCENPQ9NQS7 918 aa16.15■□□□□ 0.18
CPSF7-207ENST00000449811 PNMA2Q9UL42 364 aa16.15■□□□□ 0.18
CPSF7-207ENST00000449811 H3BQ06 376 aaPredicted RBP16.14■□□□□ 0.17
CPSF7-207ENST00000449811 RANBP6O60518 1105 aaKnown RBP16.14■□□□□ 0.17
CPSF7-207ENST00000449811 MMP3P08254 477 aa16.14■□□□□ 0.17
CPSF7-207ENST00000449811 NOVP48745 357 aa16.14■□□□□ 0.17
CPSF7-207ENST00000449811 HNRNPUQ00839 825 aaKnown RBP eCLIP16.14■□□□□ 0.17
CPSF7-207ENST00000449811 PTPROQ16827 1216 aa16.14■□□□□ 0.17
CPSF7-207ENST00000449811 KAT2BQ92831 832 aa16.14■□□□□ 0.17
CPSF7-207ENST00000449811 MRPL38Q96DV4 380 aaKnown RBP16.14■□□□□ 0.17
CPSF7-207ENST00000449811 GPCPD1Q9NPB8 672 aa16.14■□□□□ 0.17
CPSF7-207ENST00000449811 GTF2IRD1Q9UHL9 959 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms