RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 KLRF2D3W0D1 207 aa13.63□□□□□ -0.23
UBE3B-204ENST00000449510 CETN3O15182 167 aa13.63□□□□□ -0.23
UBE3B-204ENST00000449510 TBCAO75347 108 aaKnown RBP13.63□□□□□ -0.23
UBE3B-204ENST00000449510 CIAO1O76071 339 aa13.63□□□□□ -0.23
UBE3B-204ENST00000449510 PCCAP05165 728 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-204ENST00000449510 CCNE1P24864 410 aa13.63□□□□□ -0.23
UBE3B-204ENST00000449510 FNBP4Q8N3X1 1017 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-204ENST00000449510 TAB3Q8N5C8 712 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-204ENST00000449510 EPB41L4AQ9HCS5 686 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-204ENST00000449510 BCS1LQ9Y276 419 aa13.63□□□□□ -0.23
UBE3B-204ENST00000449510 SYF2O95926 243 aaKnown RBP13.62□□□□□ -0.23
UBE3B-204ENST00000449510 USP17L8P0C7I0 530 aa13.62□□□□□ -0.23
UBE3B-204ENST00000449510 GNAQP50148 359 aa13.62□□□□□ -0.23
UBE3B-204ENST00000449510 DENND2CQ68D51 928 aa13.62□□□□□ -0.23
UBE3B-204ENST00000449510 ZNF473Q8WTR7 871 aaKnown RBP13.62□□□□□ -0.23
UBE3B-204ENST00000449510 IL17RAQ96F46 866 aa13.62□□□□□ -0.23
UBE3B-204ENST00000449510 INTS9Q9NV88 658 aaKnown RBP13.62□□□□□ -0.23
UBE3B-204ENST00000449510 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.62□□□□□ -0.23
UBE3B-204ENST00000449510 AMACRQ9UHK6 382 aa13.62□□□□□ -0.23
UBE3B-204ENST00000449510 OR52Z1P0C646 297 aa13.62□□□□□ -0.23
UBE3B-204ENST00000449510 TXNRD1Q16881 649 aa13.62□□□□□ -0.23
UBE3B-204ENST00000449510 ALS2CLQ60I27 953 aa13.62□□□□□ -0.23
UBE3B-204ENST00000449510 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.62□□□□□ -0.23
UBE3B-204ENST00000449510 RETREG2Q8NC44 543 aa13.62□□□□□ -0.23
UBE3B-204ENST00000449510 GJA10Q969M2 543 aa13.62□□□□□ -0.23
UBE3B-204ENST00000449510 CTTNBP2NLQ9P2B4 639 aa13.62□□□□□ -0.23
UBE3B-204ENST00000449510 LONP1P36776 959 aaKnown RBP13.62□□□□□ -0.23
UBE3B-204ENST00000449510 LACTBP83111 547 aaPredicted RBP13.62□□□□□ -0.23
UBE3B-204ENST00000449510 ZBTB16Q05516 673 aa13.62□□□□□ -0.23
UBE3B-204ENST00000449510 USP17L2Q6R6M4 530 aa13.62□□□□□ -0.23
UBE3B-204ENST00000449510 ZNF579Q8NAF0 562 aaKnown RBP13.62□□□□□ -0.23
UBE3B-204ENST00000449510 ADAM33Q9BZ11 813 aa13.62□□□□□ -0.23
UBE3B-204ENST00000449510 RAB21Q9UL25 225 aa13.62□□□□□ -0.23
UBE3B-204ENST00000449510 MROH2AA6NES4 1674 aa13.62□□□□□ -0.23
UBE3B-204ENST00000449510 C6orf229H3BNL8 230 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 SPOPO43791 374 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 CYP4A11Q02928 519 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 ZNF211Q13398 564 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-204ENST00000449510 ADAM9Q13443 819 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 TRAPPC11Q7Z392 1133 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 MYOCDQ8IZQ8 938 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 SLC44A5Q8NCS7 719 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 GDAP1Q8TB36 358 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 TMX4Q9H1E5 349 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-204ENST00000449510 ASIC3Q9UHC3 531 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 SALL1Q9NSC2 1324 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 CHD1O14646 1710 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 POTEMA6NI47 508 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 SPDYE3A6NKU9 549 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 ENO4A6NNW6 628 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 A6NNZ2 444 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 H0Y3Z8 333 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 DAPK3O43293 454 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 HERVK_113P62684 666 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 PLCB3Q01970 1234 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 CALCOCO2Q13137 446 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 TUBB8Q3ZCM7 444 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 CCDC50Q8IVM0 306 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 NKX2-3Q8TAU0 364 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 LMBR1Q8WVP7 490 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 ZBTB21Q9ULJ3 1066 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 PLEKHG2Q9H7P9 1386 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 A2ML1A8K2U0 1454 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 FAM153BP0C7A2 387 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 COPB2P35606 906 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 CHRNDQ07001 517 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 FAM153CQ494X1 144 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 REXO1Q8N1G1 1221 aaKnown RBP13.61□□□□□ -0.23
UBE3B-204ENST00000449510 TSEN2Q8NCE0 465 aaKnown RBP13.61□□□□□ -0.23
UBE3B-204ENST00000449510 CCDC197Q8NCU1 140 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 AGXT2Q9BYV1 514 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 ZNF219Q9P2Y4 722 aaPredicted RBP13.61□□□□□ -0.23
UBE3B-204ENST00000449510 MTRF1LQ9UGC7 380 aaKnown RBP13.61□□□□□ -0.23
UBE3B-204ENST00000449510 FAM153AQ9UHL3 310 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 CAPN11Q9UMQ6 739 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 SNX24Q9Y343 169 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 NEXMIFQ5QGS0 1516 aa13.61□□□□□ -0.23
UBE3B-204ENST00000449510 XDHP47989 1333 aa13.6□□□□□ -0.23
UBE3B-204ENST00000449510 GMNCA6NCL1 334 aa13.6□□□□□ -0.23
UBE3B-204ENST00000449510 RCCD1A6NED2 376 aa13.6□□□□□ -0.23
UBE3B-204ENST00000449510 CLIC2O15247 247 aa13.6□□□□□ -0.23
UBE3B-204ENST00000449510 PDHBP11177 359 aa13.6□□□□□ -0.23
UBE3B-204ENST00000449510 NTRK3Q16288 839 aa13.6□□□□□ -0.23
UBE3B-204ENST00000449510 GSTA5Q7RTV2 222 aa13.6□□□□□ -0.23
UBE3B-204ENST00000449510 SGMS1Q86VZ5 419 aa13.6□□□□□ -0.23
UBE3B-204ENST00000449510 STAG2Q8N3U4 1231 aa13.6□□□□□ -0.23
UBE3B-204ENST00000449510 SRBD1Q8N5C6 995 aaKnown RBP13.6□□□□□ -0.23
UBE3B-204ENST00000449510 COA7Q96BR5 231 aa13.6□□□□□ -0.23
UBE3B-204ENST00000449510 YIPF3Q9GZM5 350 aa13.6□□□□□ -0.23
UBE3B-204ENST00000449510 CLGNO14967 610 aa13.6□□□□□ -0.23
UBE3B-204ENST00000449510 BAG3O95817 575 aa13.6□□□□□ -0.23
UBE3B-204ENST00000449510 VEGFAP15692 232 aaPredicted RBP13.6□□□□□ -0.23
UBE3B-204ENST00000449510 PHLDB2Q86SQ0 1253 aa13.6□□□□□ -0.23
UBE3B-204ENST00000449510 TBCKQ8TEA7 893 aa13.6□□□□□ -0.23
UBE3B-204ENST00000449510 KLHL29Q96CT2 875 aa13.6□□□□□ -0.23
UBE3B-204ENST00000449510 MEIS1O00470 390 aa13.6□□□□□ -0.23
UBE3B-204ENST00000449510 LRRN2O75325 713 aa13.6□□□□□ -0.23
UBE3B-204ENST00000449510 TNFAIP3P21580 790 aa13.6□□□□□ -0.23
UBE3B-204ENST00000449510 VWA3BQ502W6 1294 aa13.6□□□□□ -0.23
UBE3B-204ENST00000449510 NLRP10Q86W26 655 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms