RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 KIF5AQ12840 1032 aa15.21■□□□□ 0.02
POLR1B-209ENST00000448770 SLC10A5Q5PT55 438 aa15.21■□□□□ 0.02
POLR1B-209ENST00000448770 TMED8Q6PL24 325 aaPredicted RBP15.21■□□□□ 0.02
POLR1B-209ENST00000448770 KCNK18Q7Z418 384 aa15.21■□□□□ 0.02
POLR1B-209ENST00000448770 AMIGO3Q86WK7 504 aa15.21■□□□□ 0.02
POLR1B-209ENST00000448770 BAP1Q92560 729 aa15.21■□□□□ 0.02
POLR1B-209ENST00000448770 RPGRIP1Q96KN7 1286 aa15.21■□□□□ 0.02
POLR1B-209ENST00000448770 CCDC42Q96M95 316 aa15.21■□□□□ 0.02
POLR1B-209ENST00000448770 IFIH1Q9BYX4 1025 aaKnown RBP15.21■□□□□ 0.02
POLR1B-209ENST00000448770 ACBD3Q9H3P7 528 aa15.21■□□□□ 0.02
POLR1B-209ENST00000448770 MKNK2Q9HBH9 465 aa15.21■□□□□ 0.02
POLR1B-209ENST00000448770 NAV1Q8NEY1 1877 aa15.2■□□□□ 0.02
POLR1B-209ENST00000448770 LRRC53A6NM62 1247 aa15.2■□□□□ 0.02
POLR1B-209ENST00000448770 MATR3P43243 847 aaKnown RBP eCLIP15.2■□□□□ 0.02
POLR1B-209ENST00000448770 MAP9Q49MG5 647 aa15.2■□□□□ 0.02
POLR1B-209ENST00000448770 FKBP15Q5T1M5 1219 aa15.2■□□□□ 0.02
POLR1B-209ENST00000448770 SND1Q7KZF4 910 aaKnown RBP eCLIP15.2■□□□□ 0.02
POLR1B-209ENST00000448770 DYMQ7RTS9 669 aa15.2■□□□□ 0.02
POLR1B-209ENST00000448770 MAPKAPK5Q8IW41 473 aa15.2■□□□□ 0.02
POLR1B-209ENST00000448770 SPATA4Q8NEY3 305 aa15.2■□□□□ 0.02
POLR1B-209ENST00000448770 TBCKQ8TEA7 893 aa15.2■□□□□ 0.02
POLR1B-209ENST00000448770 MTMR8Q96EF0 704 aa15.2■□□□□ 0.02
POLR1B-209ENST00000448770 RABEP2Q9H5N1 569 aa15.2■□□□□ 0.02
POLR1B-209ENST00000448770 BICDL2A1A5D9 508 aa15.2■□□□□ 0.02
POLR1B-209ENST00000448770 SMCO2A6NFE2 343 aa15.2■□□□□ 0.02
POLR1B-209ENST00000448770 LAD1O00515 517 aa15.2■□□□□ 0.02
POLR1B-209ENST00000448770 SLC37A4O43826 429 aa15.2■□□□□ 0.02
POLR1B-209ENST00000448770 TM4SF1P30408 202 aa15.2■□□□□ 0.02
POLR1B-209ENST00000448770 VWA3BQ502W6 1294 aa15.2■□□□□ 0.02
POLR1B-209ENST00000448770 HAUS3Q68CZ6 603 aa15.2■□□□□ 0.02
POLR1B-209ENST00000448770 MMGT1Q8N4V1 131 aa15.2■□□□□ 0.02
POLR1B-209ENST00000448770 OSBPL9Q96SU4 736 aa15.2■□□□□ 0.02
POLR1B-209ENST00000448770 NDST4Q9H3R1 872 aa15.2■□□□□ 0.02
POLR1B-209ENST00000448770 CUEDC2Q9H467 287 aa15.2■□□□□ 0.02
POLR1B-209ENST00000448770 TCP11L1Q9NUJ3 509 aa15.2■□□□□ 0.02
POLR1B-209ENST00000448770 BIN2Q9UBW5 565 aaPredicted RBP15.2■□□□□ 0.02
POLR1B-209ENST00000448770 TNRC6CQ9HCJ0 1690 aaKnown RBP15.2■□□□□ 0.02
POLR1B-209ENST00000448770 APBA1Q02410 837 aa15.19■□□□□ 0.02
POLR1B-209ENST00000448770 NONOQ15233 471 aaKnown RBP eCLIP15.19■□□□□ 0.02
POLR1B-209ENST00000448770 LRRC41Q15345 812 aa15.19■□□□□ 0.02
POLR1B-209ENST00000448770 LRRC55Q6ZSA7 311 aa15.19■□□□□ 0.02
POLR1B-209ENST00000448770 ZNF572Q7Z3I7 529 aaPredicted RBP15.19■□□□□ 0.02
POLR1B-209ENST00000448770 AK8Q96MA6 479 aa15.19■□□□□ 0.02
POLR1B-209ENST00000448770 SHOX2O60902 331 aaPredicted RBP15.19■□□□□ 0.02
POLR1B-209ENST00000448770 LCA5LO95447 670 aa15.19■□□□□ 0.02
POLR1B-209ENST00000448770 TXKP42681 527 aa15.19■□□□□ 0.02
POLR1B-209ENST00000448770 GFPT1Q06210 699 aaPredicted RBP15.19■□□□□ 0.02
POLR1B-209ENST00000448770 ASTE1Q2TB18 679 aaPredicted RBP15.19■□□□□ 0.02
POLR1B-209ENST00000448770 NEK8Q86SG6 692 aa15.19■□□□□ 0.02
POLR1B-209ENST00000448770 PACS2Q86VP3 889 aa15.19■□□□□ 0.02
POLR1B-209ENST00000448770 FNBP4Q8N3X1 1017 aaPredicted RBP15.19■□□□□ 0.02
POLR1B-209ENST00000448770 MS4A14Q96JA4 679 aa15.19■□□□□ 0.02
POLR1B-209ENST00000448770 PIGSQ96S52 555 aa15.19■□□□□ 0.02
POLR1B-209ENST00000448770 VAT1LQ9HCJ6 419 aa15.19■□□□□ 0.02
POLR1B-209ENST00000448770 FAM184BQ9ULE4 1060 aa15.19■□□□□ 0.02
POLR1B-209ENST00000448770 JRKLQ9Y4A0 524 aa15.19■□□□□ 0.02
POLR1B-209ENST00000448770 GRIN2DO15399 1336 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 POTEMA6NI47 508 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 PPFIA4O75335 1185 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 IPO7O95373 1038 aaKnown RBP15.18■□□□□ 0.02
POLR1B-209ENST00000448770 TDP2O95551 362 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 GNAQP50148 359 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 ECM1Q16610 540 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 HGSNATQ68CP4 663 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 GALNT17Q6IS24 598 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 SMARCC1Q92922 1105 aaPredicted RBP15.18■□□□□ 0.02
POLR1B-209ENST00000448770 GJA10Q969M2 543 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 CRACR2AQ9BSW2 395 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 TLR10Q9BXR5 811 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 FGFBP2Q9BYJ0 223 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 UBA5Q9GZZ9 404 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 MMRN2Q9H8L6 949 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 MAGEF1Q9HAY2 307 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 CDK5RAP2Q96SN8 1893 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 GOLGA6BA6NDN3 693 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 ZSCAN5CA6NGD5 496 aaPredicted RBP15.18■□□□□ 0.02
POLR1B-209ENST00000448770 SLC1A4P43007 532 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 KCNMA1Q12791 1236 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 SPA17Q15506 151 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 COBLL1Q53SF7 1204 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 RRAGAQ7L523 313 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 KRT25Q7Z3Z0 450 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 FAM114A1Q8IWE2 563 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 TRIM58Q8NG06 486 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 ARL8AQ96BM9 186 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 MTMR9Q96QG7 549 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 SPZ1Q9BXG8 430 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 POLD4Q9HCU8 107 aa15.18■□□□□ 0.02
POLR1B-209ENST00000448770 RBM12Q9NTZ6 932 aaKnown RBP15.18■□□□□ 0.02
POLR1B-209ENST00000448770 NRAPQ86VF7 1730 aa15.17■□□□□ 0.02
POLR1B-209ENST00000448770 BUB1O43683 1085 aa15.17■□□□□ 0.02
POLR1B-209ENST00000448770 MCM3P25205 808 aa15.17■□□□□ 0.02
POLR1B-209ENST00000448770 CORO7P57737 925 aa15.17■□□□□ 0.02
POLR1B-209ENST00000448770 TTC19Q6DKK2 380 aaPredicted RBP15.17■□□□□ 0.02
POLR1B-209ENST00000448770 TLR2O60603 784 aa15.17■□□□□ 0.02
POLR1B-209ENST00000448770 NOP2P46087 812 aaKnown RBP15.17■□□□□ 0.02
POLR1B-209ENST00000448770 SEMA3FQ13275 785 aa15.17■□□□□ 0.02
POLR1B-209ENST00000448770 TTMPQ5BVD1 217 aa15.17■□□□□ 0.02
POLR1B-209ENST00000448770 KLHDC7AQ5VTJ3 777 aa15.17■□□□□ 0.02
POLR1B-209ENST00000448770 CNNM4Q6P4Q7 775 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms