RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 CCDC148Q8NFR7 591 aa15.05■□□□□ -0
ERGIC3-209ENST00000447986 NSUN6Q8TEA1 469 aaKnown RBP15.05■□□□□ -0
ERGIC3-209ENST00000447986 TBC1D5Q92609 795 aa15.05■□□□□ -0
ERGIC3-209ENST00000447986 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.05■□□□□ -0
ERGIC3-209ENST00000447986 UNC93B1Q9H1C4 597 aa15.05■□□□□ -0
ERGIC3-209ENST00000447986 ABHD16BQ9H3Z7 469 aa15.05■□□□□ -0
ERGIC3-209ENST00000447986 PIK3CDO00329 1044 aa15.04■□□□□ -0
ERGIC3-209ENST00000447986 IGHA2P01877 340 aa15.04■□□□□ -0
ERGIC3-209ENST00000447986 CYBAP13498 195 aa15.04■□□□□ -0
ERGIC3-209ENST00000447986 CAPN2P17655 700 aa15.04■□□□□ -0
ERGIC3-209ENST00000447986 HOXA13P31271 388 aaPredicted RBP15.04■□□□□ -0
ERGIC3-209ENST00000447986 MNX1P50219 401 aaPredicted RBP15.04■□□□□ -0
ERGIC3-209ENST00000447986 PDE4DQ08499 809 aa15.04■□□□□ -0
ERGIC3-209ENST00000447986 WASF1Q92558 559 aa15.04■□□□□ -0
ERGIC3-209ENST00000447986 FGD4Q96M96 766 aa15.04■□□□□ -0
ERGIC3-209ENST00000447986 RMDN3Q96TC7 470 aa15.04■□□□□ -0
ERGIC3-209ENST00000447986 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.04■□□□□ -0
ERGIC3-209ENST00000447986 ZNFX1Q9P2E3 1918 aaKnown RBP15.04■□□□□ -0
ERGIC3-209ENST00000447986 BAZ2BQ9UIF8 2168 aaKnown RBP15.04■□□□□ -0
ERGIC3-209ENST00000447986 PLXNA1Q9UIW2 1896 aa15.04■□□□□ -0
ERGIC3-209ENST00000447986 SMCO2A6NFE2 343 aa15.03■□□□□ -0
ERGIC3-209ENST00000447986 STXBP3O00186 592 aa15.03■□□□□ -0
ERGIC3-209ENST00000447986 PPFIA3O75145 1194 aa15.03■□□□□ -0
ERGIC3-209ENST00000447986 GJB1P08034 283 aa15.03■□□□□ -0
ERGIC3-209ENST00000447986 XBP1P17861 261 aa15.03■□□□□ -0
ERGIC3-209ENST00000447986 FCHSD1Q86WN1 690 aa15.03■□□□□ -0
ERGIC3-209ENST00000447986 NECAB1Q8N987 351 aa15.03■□□□□ -0
ERGIC3-209ENST00000447986 PURBQ96QR8 312 aaKnown RBP15.03■□□□□ -0
ERGIC3-209ENST00000447986 TAAR1Q96RJ0 339 aa15.03■□□□□ -0
ERGIC3-209ENST00000447986 IWS1Q96ST2 819 aa15.03■□□□□ -0
ERGIC3-209ENST00000447986 PAK6Q9NQU5 681 aaPredicted RBP15.03■□□□□ -0
ERGIC3-209ENST00000447986 ZHX1Q9UKY1 873 aaPredicted RBP15.03■□□□□ -0
ERGIC3-209ENST00000447986 STK36Q9NRP7 1315 aa15.03■□□□□ -0
ERGIC3-209ENST00000447986 RBBP6Q7Z6E9 1792 aaKnown RBP15.03■□□□□ -0
ERGIC3-209ENST00000447986 SPDYE3A6NKU9 549 aa15.03■□□□□ -0
ERGIC3-209ENST00000447986 SEPT4O43236 478 aa15.03■□□□□ -0
ERGIC3-209ENST00000447986 LARGE1O95461 756 aa15.03■□□□□ -0
ERGIC3-209ENST00000447986 SNAI1O95863 264 aaPredicted RBP15.03■□□□□ -0
ERGIC3-209ENST00000447986 GNA11P29992 359 aa15.03■□□□□ -0
ERGIC3-209ENST00000447986 CCND3P30281 292 aaPredicted RBP15.03■□□□□ -0
ERGIC3-209ENST00000447986 ADCY7P51828 1080 aa15.03■□□□□ -0
ERGIC3-209ENST00000447986 ACVR2BQ13705 512 aa15.03■□□□□ -0
ERGIC3-209ENST00000447986 PKN1Q16512 942 aa15.03■□□□□ -0
ERGIC3-209ENST00000447986 MORC4Q8TE76 937 aa15.03■□□□□ -0
ERGIC3-209ENST00000447986 EHMT1Q9H9B1 1298 aa15.03■□□□□ -0
ERGIC3-209ENST00000447986 C6orf50Q9HD87 102 aa15.03■□□□□ -0
ERGIC3-209ENST00000447986 RIC8AQ9NPQ8 531 aa15.03■□□□□ -0
ERGIC3-209ENST00000447986 SH3GLB2Q9NR46 395 aa15.03■□□□□ -0
ERGIC3-209ENST00000447986 SMCHD1A6NHR9 2005 aa15.02□□□□□ -0.01
ERGIC3-209ENST00000447986 ESYT2A0FGR8 921 aa15.02□□□□□ -0.01
ERGIC3-209ENST00000447986 MEIS2O14770 477 aa15.02□□□□□ -0.01
ERGIC3-209ENST00000447986 AKR1A1P14550 325 aa15.02□□□□□ -0.01
ERGIC3-209ENST00000447986 PRAMEF19Q5SWL8 479 aa15.02□□□□□ -0.01
ERGIC3-209ENST00000447986 MCTP2Q6DN12 878 aa15.02□□□□□ -0.01
ERGIC3-209ENST00000447986 USP17L6PQ6QN14 398 aa15.02□□□□□ -0.01
ERGIC3-209ENST00000447986 FAM177A1Q8N128 213 aaPredicted RBP15.02□□□□□ -0.01
ERGIC3-209ENST00000447986 BICD2Q8TD16 824 aa15.02□□□□□ -0.01
ERGIC3-209ENST00000447986 DEFB118Q96PH6 123 aa15.02□□□□□ -0.01
ERGIC3-209ENST00000447986 VTA1Q9NP79 307 aa15.02□□□□□ -0.01
ERGIC3-209ENST00000447986 PXMP2Q9NR77 195 aa15.02□□□□□ -0.01
ERGIC3-209ENST00000447986 COL20A1Q9P218 1284 aa15.02□□□□□ -0.01
ERGIC3-209ENST00000447986 DDX20Q9UHI6 824 aaKnown RBP15.02□□□□□ -0.01
ERGIC3-209ENST00000447986 FAM184BQ9ULE4 1060 aa15.02□□□□□ -0.01
ERGIC3-209ENST00000447986 ASTN1O14525 1302 aa15.02□□□□□ -0.01
ERGIC3-209ENST00000447986 SGPL1O95470 568 aa15.01□□□□□ -0.01
ERGIC3-209ENST00000447986 EIF2AK2P19525 551 aaKnown RBP15.01□□□□□ -0.01
ERGIC3-209ENST00000447986 EDNRBP24530 442 aa15.01□□□□□ -0.01
ERGIC3-209ENST00000447986 GJA8P48165 433 aa15.01□□□□□ -0.01
ERGIC3-209ENST00000447986 STXBP2Q15833 593 aa15.01□□□□□ -0.01
ERGIC3-209ENST00000447986 CCDC83Q8IWF9 413 aa15.01□□□□□ -0.01
ERGIC3-209ENST00000447986 U2AF1L4Q8WU68 220 aaKnown RBP15.01□□□□□ -0.01
ERGIC3-209ENST00000447986 LLPHQ9BRT6 129 aaKnown RBP15.01□□□□□ -0.01
ERGIC3-209ENST00000447986 ZMYND12Q9H0C1 365 aa15.01□□□□□ -0.01
ERGIC3-209ENST00000447986 ORC3Q9UBD5 711 aaPredicted RBP15.01□□□□□ -0.01
ERGIC3-209ENST00000447986 FOSP01100 380 aaPredicted RBP15□□□□□ -0.01
ERGIC3-209ENST00000447986 NR3C2P08235 984 aa15□□□□□ -0.01
ERGIC3-209ENST00000447986 ZNF865P0CJ78 1059 aaPredicted RBP15□□□□□ -0.01
ERGIC3-209ENST00000447986 NLRP5P59047 1200 aa15□□□□□ -0.01
ERGIC3-209ENST00000447986 TYW1BQ6NUM6 668 aa15□□□□□ -0.01
ERGIC3-209ENST00000447986 EEPD1Q7L9B9 569 aa15□□□□□ -0.01
ERGIC3-209ENST00000447986 TRPV1Q8NER1 839 aa15□□□□□ -0.01
ERGIC3-209ENST00000447986 VPS54Q9P1Q0 977 aa15□□□□□ -0.01
ERGIC3-209ENST00000447986 STK25O00506 426 aa14.99□□□□□ -0.01
ERGIC3-209ENST00000447986 CTDNEP1O95476 244 aa14.99□□□□□ -0.01
ERGIC3-209ENST00000447986 TFRCP02786 760 aaKnown RBP14.99□□□□□ -0.01
ERGIC3-209ENST00000447986 RARBP10826 455 aa14.99□□□□□ -0.01
ERGIC3-209ENST00000447986 CCND2P30279 289 aa14.99□□□□□ -0.01
ERGIC3-209ENST00000447986 SOX10P56693 466 aa14.99□□□□□ -0.01
ERGIC3-209ENST00000447986 HMGN5P82970 282 aaKnown RBP14.99□□□□□ -0.01
ERGIC3-209ENST00000447986 AP3B2Q13367 1082 aa14.99□□□□□ -0.01
ERGIC3-209ENST00000447986 PGM5Q15124 567 aa14.99□□□□□ -0.01
ERGIC3-209ENST00000447986 FBXO16Q8IX29 292 aaPredicted RBP14.99□□□□□ -0.01
ERGIC3-209ENST00000447986 NSUN7Q8NE18 718 aaKnown RBP14.99□□□□□ -0.01
ERGIC3-209ENST00000447986 PDCD2LQ9BRP1 358 aa14.99□□□□□ -0.01
ERGIC3-209ENST00000447986 EIF3JO75822 258 aaKnown RBP14.99□□□□□ -0.01
ERGIC3-209ENST00000447986 STAM2O75886 525 aa14.99□□□□□ -0.01
ERGIC3-209ENST00000447986 MYCLP12524 364 aaPredicted RBP14.99□□□□□ -0.01
ERGIC3-209ENST00000447986 UBE2SQ16763 222 aa14.99□□□□□ -0.01
ERGIC3-209ENST00000447986 CCDC144BQ3MJ40 725 aa14.99□□□□□ -0.01
ERGIC3-209ENST00000447986 GALNT17Q6IS24 598 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms