RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 GKAP1Q5VSY0 366 aaPredicted RBP17.71■□□□□ 0.43
CNOT3-204ENST00000447684 RETREG2Q8NC44 543 aa17.71■□□□□ 0.43
CNOT3-204ENST00000447684 NSMCE1Q8WV22 266 aa17.71■□□□□ 0.43
CNOT3-204ENST00000447684 RNF26Q9BY78 433 aaPredicted RBP17.71■□□□□ 0.43
CNOT3-204ENST00000447684 RIC1Q4ADV7 1423 aa17.71■□□□□ 0.42
CNOT3-204ENST00000447684 BAZ2BQ9UIF8 2168 aaKnown RBP17.7■□□□□ 0.42
CNOT3-204ENST00000447684 EPHB6O15197 1021 aa17.7■□□□□ 0.42
CNOT3-204ENST00000447684 TRAPPC3O43617 180 aa17.7■□□□□ 0.42
CNOT3-204ENST00000447684 RTN2O75298 545 aa17.7■□□□□ 0.42
CNOT3-204ENST00000447684 PHKA1P46020 1223 aa17.7■□□□□ 0.42
CNOT3-204ENST00000447684 CABP4P57796 275 aa17.7■□□□□ 0.42
CNOT3-204ENST00000447684 PKN1Q16512 942 aa17.7■□□□□ 0.42
CNOT3-204ENST00000447684 UBLCP1Q8WVY7 318 aaPredicted RBP17.7■□□□□ 0.42
CNOT3-204ENST00000447684 TIAM2Q8IVF5 1701 aa17.7■□□□□ 0.42
CNOT3-204ENST00000447684 IRX1P78414 480 aaPredicted RBP17.7■□□□□ 0.42
CNOT3-204ENST00000447684 PTPROQ16827 1216 aa17.7■□□□□ 0.42
CNOT3-204ENST00000447684 CCDC178Q5BJE1 867 aa17.7■□□□□ 0.42
CNOT3-204ENST00000447684 KLHDC7AQ5VTJ3 777 aa17.7■□□□□ 0.42
CNOT3-204ENST00000447684 TLDC1Q6P9B6 456 aa17.7■□□□□ 0.42
CNOT3-204ENST00000447684 CD302Q8IX05 232 aa17.7■□□□□ 0.42
CNOT3-204ENST00000447684 WHAMMQ8TF30 809 aa17.7■□□□□ 0.42
CNOT3-204ENST00000447684 KIF9Q9HAQ2 790 aa17.7■□□□□ 0.42
CNOT3-204ENST00000447684 NOVA2Q9UNW9 492 aaKnown RBP17.7■□□□□ 0.42
CNOT3-204ENST00000447684 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.7■□□□□ 0.42
CNOT3-204ENST00000447684 CYP27B1O15528 508 aa17.69■□□□□ 0.42
CNOT3-204ENST00000447684 RAD51CO43502 376 aa17.69■□□□□ 0.42
CNOT3-204ENST00000447684 ATP6V1G2O95670 118 aa17.69■□□□□ 0.42
CNOT3-204ENST00000447684 IFFO1Q0D2I5 559 aa17.69■□□□□ 0.42
CNOT3-204ENST00000447684 ENOX2Q16206 610 aaKnown RBP17.69■□□□□ 0.42
CNOT3-204ENST00000447684 CDC37Q16543 378 aaPredicted RBP17.69■□□□□ 0.42
CNOT3-204ENST00000447684 TTI2Q6NXR4 508 aa17.69■□□□□ 0.42
CNOT3-204ENST00000447684 DDX42Q86XP3 938 aaKnown RBP eCLIP17.69■□□□□ 0.42
CNOT3-204ENST00000447684 RAPGEF5Q92565 580 aa17.69■□□□□ 0.42
CNOT3-204ENST00000447684 L3MBTL1Q9Y468 752 aa17.69■□□□□ 0.42
CNOT3-204ENST00000447684 TNKSO95271 1327 aa17.69■□□□□ 0.42
CNOT3-204ENST00000447684 HSD17B3P37058 310 aa17.69■□□□□ 0.42
CNOT3-204ENST00000447684 SLC1A4P43007 532 aa17.69■□□□□ 0.42
CNOT3-204ENST00000447684 NLRP5P59047 1200 aa17.69■□□□□ 0.42
CNOT3-204ENST00000447684 MIGA1Q8NAN2 632 aa17.69■□□□□ 0.42
CNOT3-204ENST00000447684 ZNF512BQ96KM6 892 aaPredicted RBP17.69■□□□□ 0.42
CNOT3-204ENST00000447684 CSB-PGBD3P0DP91 1061 aa17.68■□□□□ 0.42
CNOT3-204ENST00000447684 ELF3P78545 371 aaPredicted RBP17.68■□□□□ 0.42
CNOT3-204ENST00000447684 EHHADHQ08426 723 aa17.68■□□□□ 0.42
CNOT3-204ENST00000447684 ZKSCAN8Q15776 578 aaPredicted RBP17.68■□□□□ 0.42
CNOT3-204ENST00000447684 ANKRD40Q6AI12 368 aa17.68■□□□□ 0.42
CNOT3-204ENST00000447684 TMTC2Q8N394 836 aa17.68■□□□□ 0.42
CNOT3-204ENST00000447684 DUSP9Q99956 384 aaKnown RBP17.68■□□□□ 0.42
CNOT3-204ENST00000447684 PYM1Q9BRP8 204 aaKnown RBP17.68■□□□□ 0.42
CNOT3-204ENST00000447684 LRRC53A6NM62 1247 aa17.68■□□□□ 0.42
CNOT3-204ENST00000447684 CNOT8Q9UFF9 292 aaKnown RBP17.68■□□□□ 0.42
CNOT3-204ENST00000447684 TRPM3Q9HCF6 1732 aaPredicted RBP17.68■□□□□ 0.42
CNOT3-204ENST00000447684 TCRBV5S4A2TA0A5A2 114 aa17.68■□□□□ 0.42
CNOT3-204ENST00000447684 PALMO75781 387 aa17.68■□□□□ 0.42
CNOT3-204ENST00000447684 SYNE4Q8N205 404 aa17.68■□□□□ 0.42
CNOT3-204ENST00000447684 MREGQ8N565 214 aa17.68■□□□□ 0.42
CNOT3-204ENST00000447684 ARMC2Q8NEN0 867 aa17.68■□□□□ 0.42
CNOT3-204ENST00000447684 HELBQ8NG08 1087 aaPredicted RBP17.68■□□□□ 0.42
CNOT3-204ENST00000447684 LPIN2Q92539 896 aa17.68■□□□□ 0.42
CNOT3-204ENST00000447684 CUL5Q93034 780 aa17.68■□□□□ 0.42
CNOT3-204ENST00000447684 NACAP1Q9BZK3 213 aa17.68■□□□□ 0.42
CNOT3-204ENST00000447684 PLAGL2Q9UPG8 496 aa17.68■□□□□ 0.42
CNOT3-204ENST00000447684 SOS2Q07890 1332 aaPredicted RBP17.67■□□□□ 0.42
CNOT3-204ENST00000447684 EME2A4GXA9 379 aaPredicted RBP17.67■□□□□ 0.42
CNOT3-204ENST00000447684 ENO4A6NNW6 628 aa17.67■□□□□ 0.42
CNOT3-204ENST00000447684 GSG1L2A8MUP6 293 aa17.67■□□□□ 0.42
CNOT3-204ENST00000447684 DCDC2CA8MYV0 355 aa17.67■□□□□ 0.42
CNOT3-204ENST00000447684 MAGOHP61326 146 aaKnown RBP17.67■□□□□ 0.42
CNOT3-204ENST00000447684 XRCC4Q13426 336 aa17.67■□□□□ 0.42
CNOT3-204ENST00000447684 EMC10Q5UCC4 262 aa17.67■□□□□ 0.42
CNOT3-204ENST00000447684 TBC1D1Q86TI0 1168 aaPredicted RBP17.67■□□□□ 0.42
CNOT3-204ENST00000447684 MDM1Q8TC05 714 aa17.67■□□□□ 0.42
CNOT3-204ENST00000447684 MICAL1Q8TDZ2 1067 aa17.67■□□□□ 0.42
CNOT3-204ENST00000447684 MAGOHBQ96A72 148 aaKnown RBP17.67■□□□□ 0.42
CNOT3-204ENST00000447684 SLC12A6Q9UHW9 1150 aa17.67■□□□□ 0.42
CNOT3-204ENST00000447684 MYH6P13533 1939 aa17.67■□□□□ 0.42
CNOT3-204ENST00000447684 SMIM22K7EJ46 135 aa17.67■□□□□ 0.42
CNOT3-204ENST00000447684 KIF3CO14782 793 aa17.67■□□□□ 0.42
CNOT3-204ENST00000447684 PPP2R2AP63151 447 aa17.67■□□□□ 0.42
CNOT3-204ENST00000447684 CACNA2D4Q7Z3S7 1137 aa17.67■□□□□ 0.42
CNOT3-204ENST00000447684 CEP120Q8N960 986 aa17.67■□□□□ 0.42
CNOT3-204ENST00000447684 MAGEC3Q8TD91 643 aa17.67■□□□□ 0.42
CNOT3-204ENST00000447684 DISC1Q9NRI5 854 aa17.67■□□□□ 0.42
CNOT3-204ENST00000447684 MGRN1O60291 552 aa17.66■□□□□ 0.42
CNOT3-204ENST00000447684 UBA7P41226 1012 aa17.66■□□□□ 0.42
CNOT3-204ENST00000447684 ZNF844Q08AG5 666 aa17.66■□□□□ 0.42
CNOT3-204ENST00000447684 BYSLQ13895 437 aaKnown RBP17.66■□□□□ 0.42
CNOT3-204ENST00000447684 P2RX5Q93086 422 aa17.66■□□□□ 0.42
CNOT3-204ENST00000447684 HPS3Q969F9 1004 aa17.66■□□□□ 0.42
CNOT3-204ENST00000447684 ORAI2Q96SN7 254 aa17.66■□□□□ 0.42
CNOT3-204ENST00000447684 EIF4E1BA6NMX2 242 aaKnown RBP17.66■□□□□ 0.42
CNOT3-204ENST00000447684 RCAN1P53805 252 aa17.66■□□□□ 0.42
CNOT3-204ENST00000447684 PDE4DQ08499 809 aa17.66■□□□□ 0.42
CNOT3-204ENST00000447684 MIIPQ5JXC2 388 aa17.66■□□□□ 0.42
CNOT3-204ENST00000447684 FAM114A1Q8IWE2 563 aa17.66■□□□□ 0.42
CNOT3-204ENST00000447684 LCORLQ8N3X6 602 aa17.66■□□□□ 0.42
CNOT3-204ENST00000447684 CCDC63Q8NA47 563 aa17.66■□□□□ 0.42
CNOT3-204ENST00000447684 LMBR1Q8WVP7 490 aa17.66■□□□□ 0.42
CNOT3-204ENST00000447684 ISCA1Q9BUE6 129 aa17.66■□□□□ 0.42
CNOT3-204ENST00000447684 TAF1DQ9H5J8 278 aaPredicted RBP17.66■□□□□ 0.42
CNOT3-204ENST00000447684 ADAMTS3O15072 1205 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms