RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 PAFAH1B1P43034 410 aa21.19■□□□□ 0.98
HMGA1-205ENST00000447654 HAND2P61296 217 aa21.19■□□□□ 0.98
HMGA1-205ENST00000447654 SEPT2Q15019 361 aa21.19■□□□□ 0.98
HMGA1-205ENST00000447654 PPP1R7Q15435 360 aa21.19■□□□□ 0.98
HMGA1-205ENST00000447654 THEMIS2Q5TEJ8 643 aa21.19■□□□□ 0.98
HMGA1-205ENST00000447654 STK11IPQ8N1F8 1099 aa21.19■□□□□ 0.98
HMGA1-205ENST00000447654 TAF1DQ9H5J8 278 aaPredicted RBP21.19■□□□□ 0.98
HMGA1-205ENST00000447654 PLCB1Q9NQ66 1216 aa21.19■□□□□ 0.98
HMGA1-205ENST00000447654 PIH1D3Q9NQM4 214 aaKnown RBP21.19■□□□□ 0.98
HMGA1-205ENST00000447654 GPHNQ9NQX3 736 aaPredicted RBP21.19■□□□□ 0.98
HMGA1-205ENST00000447654 PAPOLBQ9NRJ5 636 aaKnown RBP21.19■□□□□ 0.98
HMGA1-205ENST00000447654 HYOU1Q9Y4L1 999 aa21.19■□□□□ 0.98
HMGA1-205ENST00000447654 COL4A1P02462 1669 aa21.19■□□□□ 0.98
HMGA1-205ENST00000447654 CCT8L1PA6NM43 557 aa21.19■□□□□ 0.98
HMGA1-205ENST00000447654 PPP1R3GB7ZBB8 358 aa21.19■□□□□ 0.98
HMGA1-205ENST00000447654 PPFIA2O75334 1257 aa21.19■□□□□ 0.98
HMGA1-205ENST00000447654 TRIM29Q14134 588 aa21.19■□□□□ 0.98
HMGA1-205ENST00000447654 FAM98CQ17RN3 349 aaKnown RBP21.19■□□□□ 0.98
HMGA1-205ENST00000447654 RUFY4Q6ZNE9 571 aa21.19■□□□□ 0.98
HMGA1-205ENST00000447654 BARGINQ6ZT62 677 aa21.19■□□□□ 0.98
HMGA1-205ENST00000447654 ZFATQ9P243 1243 aa21.19■□□□□ 0.98
HMGA1-205ENST00000447654 GOLGA6L10A0A0M3HER8 536 aa21.18■□□□□ 0.98
HMGA1-205ENST00000447654 ARID4AP29374 1257 aaPredicted RBP21.18■□□□□ 0.98
HMGA1-205ENST00000447654 MAGEA8P43361 318 aa21.18■□□□□ 0.98
HMGA1-205ENST00000447654 KIF5AQ12840 1032 aa21.18■□□□□ 0.98
HMGA1-205ENST00000447654 AGBL2Q5U5Z8 902 aa21.18■□□□□ 0.98
HMGA1-205ENST00000447654 SH3RF1Q7Z6J0 888 aa21.18■□□□□ 0.98
HMGA1-205ENST00000447654 GALNT15Q8N3T1 639 aa21.18■□□□□ 0.98
HMGA1-205ENST00000447654 NUP133Q8WUM0 1156 aa21.18■□□□□ 0.98
HMGA1-205ENST00000447654 TSC22D3Q99576 134 aa21.18■□□□□ 0.98
HMGA1-205ENST00000447654 STXBP3O00186 592 aa21.17■□□□□ 0.98
HMGA1-205ENST00000447654 TRIM37O94972 964 aa21.17■□□□□ 0.98
HMGA1-205ENST00000447654 FGAP02671 866 aa21.17■□□□□ 0.98
HMGA1-205ENST00000447654 LINGO3P0C6S8 592 aa21.17■□□□□ 0.98
HMGA1-205ENST00000447654 CD44P16070 742 aaKnown RBP21.17■□□□□ 0.98
HMGA1-205ENST00000447654 HSPA9P38646 679 aaKnown RBP21.17■□□□□ 0.98
HMGA1-205ENST00000447654 CDK17Q00537 523 aa21.17■□□□□ 0.98
HMGA1-205ENST00000447654 CACNA2D4Q7Z3S7 1137 aa21.17■□□□□ 0.98
HMGA1-205ENST00000447654 NKX2-3Q8TAU0 364 aa21.17■□□□□ 0.98
HMGA1-205ENST00000447654 GJB4Q9NTQ9 266 aa21.17■□□□□ 0.98
HMGA1-205ENST00000447654 ZNHIT6Q9NWK9 470 aaKnown RBP21.17■□□□□ 0.98
HMGA1-205ENST00000447654 RWDD2AQ9UIY3 292 aa21.17■□□□□ 0.98
HMGA1-205ENST00000447654 B4DLN1 442 aa21.17■□□□□ 0.98
HMGA1-205ENST00000447654 GCOM1H8Y6P7 765 aaPredicted RBP21.17■□□□□ 0.98
HMGA1-205ENST00000447654 PDLIM1O00151 329 aa21.17■□□□□ 0.98
HMGA1-205ENST00000447654 MYZAPP0CAP1 466 aa21.17■□□□□ 0.98
HMGA1-205ENST00000447654 FGFR2P21802 821 aa21.17■□□□□ 0.98
HMGA1-205ENST00000447654 SNX1Q13596 522 aa21.17■□□□□ 0.98
HMGA1-205ENST00000447654 LAMB3Q13751 1172 aa21.17■□□□□ 0.98
HMGA1-205ENST00000447654 ITIH4Q14624 930 aa21.17■□□□□ 0.98
HMGA1-205ENST00000447654 IFI16Q16666 785 aaKnown RBP21.17■□□□□ 0.98
HMGA1-205ENST00000447654 ANKS4BQ8N8V4 417 aa21.17■□□□□ 0.98
HMGA1-205ENST00000447654 YIPF3Q9GZM5 350 aa21.17■□□□□ 0.98
HMGA1-205ENST00000447654 CEP131Q9UPN4 1083 aa21.17■□□□□ 0.98
HMGA1-205ENST00000447654 SRPRBQ9Y5M8 271 aaKnown RBP21.17■□□□□ 0.98
HMGA1-205ENST00000447654 LRP5O75197 1615 aa21.17■□□□□ 0.98
HMGA1-205ENST00000447654 RREB1Q92766 1687 aa21.16■□□□□ 0.98
HMGA1-205ENST00000447654 EP400Q96L91 3159 aa21.16■□□□□ 0.98
HMGA1-205ENST00000447654 PRC1O43663 620 aa21.16■□□□□ 0.98
HMGA1-205ENST00000447654 TCP11X2Q5H9J9 407 aa21.16■□□□□ 0.98
HMGA1-205ENST00000447654 MB21D2Q8IYB1 491 aaPredicted RBP21.16■□□□□ 0.98
HMGA1-205ENST00000447654 APPBP2Q92624 585 aa21.16■□□□□ 0.98
HMGA1-205ENST00000447654 EZH1Q92800 747 aaPredicted RBP21.16■□□□□ 0.98
HMGA1-205ENST00000447654 CENPTQ96BT3 561 aa21.16■□□□□ 0.98
HMGA1-205ENST00000447654 DTNBP1Q96EV8 351 aa21.16■□□□□ 0.98
HMGA1-205ENST00000447654 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.16■□□□□ 0.989e-9■■■□□ 17.2
HMGA1-205ENST00000447654 TSKSQ9UJT2 592 aa21.16■□□□□ 0.98
HMGA1-205ENST00000447654 ABCC12Q96J65 1359 aa21.16■□□□□ 0.98
HMGA1-205ENST00000447654 MYH7P12883 1935 aa21.16■□□□□ 0.98
HMGA1-205ENST00000447654 ORC4O43929 436 aa21.16■□□□□ 0.98
HMGA1-205ENST00000447654 IMPDH2P12268 514 aa21.16■□□□□ 0.98
HMGA1-205ENST00000447654 CCT6AP40227 531 aaKnown RBP21.16■□□□□ 0.98
HMGA1-205ENST00000447654 RILPL1Q5EBL4 403 aa21.16■□□□□ 0.98
HMGA1-205ENST00000447654 RETREG2Q8NC44 543 aa21.16■□□□□ 0.98
HMGA1-205ENST00000447654 ANKIB1Q9P2G1 1089 aa21.16■□□□□ 0.98
HMGA1-205ENST00000447654 NIP7Q9Y221 180 aaKnown RBP eCLIP21.16■□□□□ 0.98
HMGA1-205ENST00000447654 TTC26A0AVF1 554 aa21.15■□□□□ 0.98
HMGA1-205ENST00000447654 GPAA1O43292 621 aa21.15■□□□□ 0.98
HMGA1-205ENST00000447654 USO1O60763 962 aaKnown RBP21.15■□□□□ 0.98
HMGA1-205ENST00000447654 NTSR2O95665 410 aa21.15■□□□□ 0.98
HMGA1-205ENST00000447654 RBM5P52756 815 aaKnown RBP eCLIP21.15■□□□□ 0.98
HMGA1-205ENST00000447654 KLHL10Q6JEL2 608 aa21.15■□□□□ 0.98
HMGA1-205ENST00000447654 WDR59Q6PJI9 974 aa21.15■□□□□ 0.98
HMGA1-205ENST00000447654 MAATS1Q7Z4T9 603 aa21.15■□□□□ 0.98
HMGA1-205ENST00000447654 CCDC197Q8NCU1 140 aa21.15■□□□□ 0.98
HMGA1-205ENST00000447654 CNOT10Q9H9A5 744 aaKnown RBP21.15■□□□□ 0.98
HMGA1-205ENST00000447654 KCNMB3Q9NPA1 279 aa21.15■□□□□ 0.98
HMGA1-205ENST00000447654 RGS17Q9UGC6 210 aaPredicted RBP21.15■□□□□ 0.98
HMGA1-205ENST00000447654 DENND2AQ9ULE3 1009 aa21.15■□□□□ 0.98
HMGA1-205ENST00000447654 NPTXRO95502 500 aa21.14■□□□□ 0.98
HMGA1-205ENST00000447654 ATP4AP20648 1035 aa21.14■□□□□ 0.98
HMGA1-205ENST00000447654 CDC25AP30304 524 aa21.14■□□□□ 0.98
HMGA1-205ENST00000447654 STX17P56962 302 aa21.14■□□□□ 0.98
HMGA1-205ENST00000447654 SLC7A5Q01650 507 aa21.14■□□□□ 0.98
HMGA1-205ENST00000447654 QPCTQ16769 361 aa21.14■□□□□ 0.98
HMGA1-205ENST00000447654 CMPK2Q5EBM0 449 aa21.14■□□□□ 0.98
HMGA1-205ENST00000447654 ZFYP08048 801 aaPredicted RBP21.14■□□□□ 0.97
HMGA1-205ENST00000447654 CNGA1P29973 690 aa21.14■□□□□ 0.97
HMGA1-205ENST00000447654 PPP2R2AP63151 447 aa21.14■□□□□ 0.97
HMGA1-205ENST00000447654 SPATA21Q7Z572 469 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms