RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 ZNF536O15090 1300 aa14.62□□□□□ -0.07
SSR4-205ENST00000447375 GRXCR2A6NFK2 248 aa14.61□□□□□ -0.07
SSR4-205ENST00000447375 DYNC1LI2O43237 492 aaPredicted RBP14.61□□□□□ -0.07
SSR4-205ENST00000447375 NMT2O60551 498 aa14.61□□□□□ -0.07
SSR4-205ENST00000447375 SUPT20HL2P0C7V6 817 aa14.61□□□□□ -0.07
SSR4-205ENST00000447375 RRP12Q5JTH9 1297 aaKnown RBP14.61□□□□□ -0.07
SSR4-205ENST00000447375 CPXCR1Q8N123 301 aa14.61□□□□□ -0.07
SSR4-205ENST00000447375 GMCL1P1Q8NEA9 526 aa14.61□□□□□ -0.07
SSR4-205ENST00000447375 GDPD5Q8WTR4 605 aa14.61□□□□□ -0.07
SSR4-205ENST00000447375 ESR2Q92731 530 aa14.61□□□□□ -0.07
SSR4-205ENST00000447375 SLF1Q9BQI6 1058 aa14.61□□□□□ -0.07
SSR4-205ENST00000447375 FTOQ9C0B1 505 aaKnown RBP eCLIP14.61□□□□□ -0.07
SSR4-205ENST00000447375 TRMT13Q9NUP7 481 aaKnown RBP14.61□□□□□ -0.07
SSR4-205ENST00000447375 CDC45O75419 566 aa14.6□□□□□ -0.07
SSR4-205ENST00000447375 NDUFB10O96000 172 aa14.6□□□□□ -0.07
SSR4-205ENST00000447375 RFC2P35250 354 aa14.6□□□□□ -0.07
SSR4-205ENST00000447375 PUS10Q3MIT2 529 aaKnown RBP14.6□□□□□ -0.07
SSR4-205ENST00000447375 KIAA1211Q6ZU35 1233 aa14.6□□□□□ -0.07
SSR4-205ENST00000447375 HFE2Q6ZVN8 426 aa14.6□□□□□ -0.07
SSR4-205ENST00000447375 ANKS1AQ92625 1134 aa14.6□□□□□ -0.07
SSR4-205ENST00000447375 MFSD14AQ96MC6 490 aa14.6□□□□□ -0.07
SSR4-205ENST00000447375 LSG1Q9H089 658 aaKnown RBP14.6□□□□□ -0.07
SSR4-205ENST00000447375 CTDP1Q9Y5B0 961 aaPredicted RBP14.6□□□□□ -0.07
SSR4-205ENST00000447375 NEDD4P46934 1319 aa14.6□□□□□ -0.07
SSR4-205ENST00000447375 LCHNA4D1U4 455 aa14.59□□□□□ -0.07
SSR4-205ENST00000447375 ZBED4O75132 1171 aa14.59□□□□□ -0.07
SSR4-205ENST00000447375 CYP21A2P08686 494 aa14.59□□□□□ -0.07
SSR4-205ENST00000447375 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.59□□□□□ -0.07
SSR4-205ENST00000447375 TTC14Q96N46 770 aa14.59□□□□□ -0.07
SSR4-205ENST00000447375 CNNM2Q9H8M5 875 aa14.59□□□□□ -0.07
SSR4-205ENST00000447375 SUGCTQ9HAC7 445 aa14.59□□□□□ -0.07
SSR4-205ENST00000447375 FBXO40Q9UH90 709 aa14.59□□□□□ -0.07
SSR4-205ENST00000447375 STX8Q9UNK0 236 aa14.59□□□□□ -0.07
SSR4-205ENST00000447375 TNKSO95271 1327 aa14.59□□□□□ -0.07
SSR4-205ENST00000447375 ATP2A1O14983 1001 aa14.58□□□□□ -0.08
SSR4-205ENST00000447375 SMPD1P17405 629 aa14.58□□□□□ -0.08
SSR4-205ENST00000447375 PTGS1P23219 599 aa14.58□□□□□ -0.08
SSR4-205ENST00000447375 FOXK2Q01167 660 aa14.58□□□□□ -0.08
SSR4-205ENST00000447375 SLFN13Q68D06 897 aa14.58□□□□□ -0.08
SSR4-205ENST00000447375 RCSD1Q6JBY9 416 aa14.58□□□□□ -0.08
SSR4-205ENST00000447375 CASC1Q6TDU7 716 aa14.58□□□□□ -0.08
SSR4-205ENST00000447375 LRRC47Q8N1G4 583 aaKnown RBP14.58□□□□□ -0.08
SSR4-205ENST00000447375 PRPF38AQ8NAV1 312 aaKnown RBP14.58□□□□□ -0.08
SSR4-205ENST00000447375 RETREG2Q8NC44 543 aa14.58□□□□□ -0.08
SSR4-205ENST00000447375 GMCL1Q96IK5 515 aa14.58□□□□□ -0.08
SSR4-205ENST00000447375 NUP88Q99567 741 aaPredicted RBP14.58□□□□□ -0.08
SSR4-205ENST00000447375 KRT23Q9C075 422 aa14.58□□□□□ -0.08
SSR4-205ENST00000447375 RAVER2Q9HCJ3 691 aaKnown RBP14.58□□□□□ -0.08
SSR4-205ENST00000447375 ZSWIM5Q9P217 1185 aa14.58□□□□□ -0.08
SSR4-205ENST00000447375 MTUS1Q9ULD2 1270 aa14.58□□□□□ -0.08
SSR4-205ENST00000447375 RBM8AQ9Y5S9 174 aaKnown RBP14.58□□□□□ -0.08
SSR4-205ENST00000447375 LCTP09848 1927 aa14.57□□□□□ -0.08
SSR4-205ENST00000447375 B4E1Z4 1266 aa14.57□□□□□ -0.08
SSR4-205ENST00000447375 KDM4AO75164 1064 aa14.57□□□□□ -0.08
SSR4-205ENST00000447375 BAIAP3O94812 1187 aa14.57□□□□□ -0.08
SSR4-205ENST00000447375 IQCF3P0C7M6 154 aa14.57□□□□□ -0.08
SSR4-205ENST00000447375 TOP1P11387 765 aaKnown RBP14.57□□□□□ -0.08
SSR4-205ENST00000447375 KCNJ6P48051 423 aa14.57□□□□□ -0.08
SSR4-205ENST00000447375 CNTN2Q02246 1040 aa14.57□□□□□ -0.08
SSR4-205ENST00000447375 CHST13Q8NET6 341 aa14.57□□□□□ -0.08
SSR4-205ENST00000447375 TMEM47Q9BQJ4 181 aa14.57□□□□□ -0.08
SSR4-205ENST00000447375 ZBED2Q9BTP6 218 aa14.57□□□□□ -0.08
SSR4-205ENST00000447375 Q9Y3F1 56 aa14.57□□□□□ -0.08
SSR4-205ENST00000447375 ASB14A6NK59 587 aa14.56□□□□□ -0.08
SSR4-205ENST00000447375 BMP3P12645 472 aa14.56□□□□□ -0.08
SSR4-205ENST00000447375 NECTIN1Q15223 517 aa14.56□□□□□ -0.08
SSR4-205ENST00000447375 CCDC178Q5BJE1 867 aa14.56□□□□□ -0.08
SSR4-205ENST00000447375 IQSEC1Q6DN90 963 aa14.56□□□□□ -0.08
SSR4-205ENST00000447375 IQCA1Q86XH1 822 aa14.56□□□□□ -0.08
SSR4-205ENST00000447375 DGKHQ86XP1 1220 aa14.56□□□□□ -0.08
SSR4-205ENST00000447375 NEK9Q8TD19 979 aa14.56□□□□□ -0.08
SSR4-205ENST00000447375 ANO2Q9NQ90 1003 aa14.56□□□□□ -0.08
SSR4-205ENST00000447375 PDGFCQ9NRA1 345 aa14.56□□□□□ -0.08
SSR4-205ENST00000447375 FEM1BQ9UK73 627 aa14.56□□□□□ -0.08
SSR4-205ENST00000447375 TAF6LQ9Y6J9 622 aa14.56□□□□□ -0.08
SSR4-205ENST00000447375 USP34Q70CQ2 3546 aa14.56□□□□□ -0.08
SSR4-205ENST00000447375 E7EWF7 191 aa14.55□□□□□ -0.08
SSR4-205ENST00000447375 MCCP23508 829 aa14.55□□□□□ -0.08
SSR4-205ENST00000447375 SLC1A4P43007 532 aa14.55□□□□□ -0.08
SSR4-205ENST00000447375 PTPN5P54829 565 aa14.55□□□□□ -0.08
SSR4-205ENST00000447375 ERVK-21P61565 698 aa14.55□□□□□ -0.08
SSR4-205ENST00000447375 TRDNQ13061 729 aa14.55□□□□□ -0.08
SSR4-205ENST00000447375 TMCO2Q7Z6W1 182 aaPredicted RBP14.55□□□□□ -0.08
SSR4-205ENST00000447375 FAM133AQ8N9E0 248 aa14.55□□□□□ -0.08
SSR4-205ENST00000447375 PRSS33Q8NF86 280 aa14.55□□□□□ -0.08
SSR4-205ENST00000447375 KIFC2Q96AC6 838 aa14.55□□□□□ -0.08
SSR4-205ENST00000447375 TGS1Q96RS0 853 aaKnown RBP14.55□□□□□ -0.08
SSR4-205ENST00000447375 ZSCAN10Q96SZ4 725 aaPredicted RBP14.55□□□□□ -0.08
SSR4-205ENST00000447375 ZKSCAN3Q9BRR0 538 aa14.55□□□□□ -0.08
SSR4-205ENST00000447375 UPF3BQ9BZI7 483 aaKnown RBP14.55□□□□□ -0.08
SSR4-205ENST00000447375 COL4A4P53420 1690 aaPredicted RBP14.55□□□□□ -0.08
SSR4-205ENST00000447375 LAMA4Q16363 1823 aa14.55□□□□□ -0.08
SSR4-205ENST00000447375 SOWAHBA6NEL2 793 aa14.54□□□□□ -0.08
SSR4-205ENST00000447375 C19orf67A6NJJ6 358 aa14.54□□□□□ -0.08
SSR4-205ENST00000447375 H3BQ06 376 aaPredicted RBP14.54□□□□□ -0.08
SSR4-205ENST00000447375 PITPNM1O00562 1244 aa14.54□□□□□ -0.08
SSR4-205ENST00000447375 PLA2G6O60733 806 aa14.54□□□□□ -0.08
SSR4-205ENST00000447375 WDR5P61964 334 aaKnown RBP14.54□□□□□ -0.08
SSR4-205ENST00000447375 ZP2Q05996 745 aa14.54□□□□□ -0.08
SSR4-205ENST00000447375 BFSP2Q13515 415 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms