RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 SOWAHBA6NEL2 793 aa20.57■□□□□ 0.88
TRAPPC4-203ENST00000447216 SPDYE3A6NKU9 549 aa20.57■□□□□ 0.88
TRAPPC4-203ENST00000447216 ZSCAN22P10073 491 aaPredicted RBP20.57■□□□□ 0.88
TRAPPC4-203ENST00000447216 MAP2K5Q13163 448 aa20.57■□□□□ 0.88
TRAPPC4-203ENST00000447216 PIK3AP1Q6ZUJ8 805 aa20.57■□□□□ 0.88
TRAPPC4-203ENST00000447216 ERO1AQ96HE7 468 aa20.57■□□□□ 0.88
TRAPPC4-203ENST00000447216 GJD2Q9UKL4 321 aa20.57■□□□□ 0.88
TRAPPC4-203ENST00000447216 GABRQQ9UN88 632 aa20.57■□□□□ 0.88
TRAPPC4-203ENST00000447216 ZDHHC9Q9Y397 364 aa20.57■□□□□ 0.88
TRAPPC4-203ENST00000447216 CCDC194A0A1B0GVG4 234 aa20.56■□□□□ 0.88
TRAPPC4-203ENST00000447216 HSPA8P11142 646 aaKnown RBP20.56■□□□□ 0.88
TRAPPC4-203ENST00000447216 EIF2AK2P19525 551 aaKnown RBP20.56■□□□□ 0.88
TRAPPC4-203ENST00000447216 RESTQ13127 1097 aa20.56■□□□□ 0.88
TRAPPC4-203ENST00000447216 AP3B2Q13367 1082 aa20.56■□□□□ 0.88
TRAPPC4-203ENST00000447216 ZNF792Q3KQV3 632 aa20.56■□□□□ 0.88
TRAPPC4-203ENST00000447216 KRT25Q7Z3Z0 450 aa20.56■□□□□ 0.88
TRAPPC4-203ENST00000447216 DPP9Q86TI2 863 aa20.56■□□□□ 0.88
TRAPPC4-203ENST00000447216 IL31RAQ8NI17 732 aa20.56■□□□□ 0.88
TRAPPC4-203ENST00000447216 NPLOC4Q8TAT6 608 aa20.56■□□□□ 0.88
TRAPPC4-203ENST00000447216 USP6NLQ92738 828 aa20.56■□□□□ 0.88
TRAPPC4-203ENST00000447216 RMDN3Q96TC7 470 aa20.56■□□□□ 0.88
TRAPPC4-203ENST00000447216 NUDT12Q9BQG2 462 aa20.56■□□□□ 0.88
TRAPPC4-203ENST00000447216 MAF1Q9H063 256 aa20.56■□□□□ 0.88
TRAPPC4-203ENST00000447216 PXMP2Q9NR77 195 aa20.56■□□□□ 0.88
TRAPPC4-203ENST00000447216 BRD1O95696 1058 aa20.55■□□□□ 0.88
TRAPPC4-203ENST00000447216 FOSP01100 380 aaPredicted RBP20.55■□□□□ 0.88
TRAPPC4-203ENST00000447216 CYP2B6P20813 491 aa20.55■□□□□ 0.88
TRAPPC4-203ENST00000447216 U2AF2P26368 475 aaKnown RBP eCLIP20.55■□□□□ 0.88
TRAPPC4-203ENST00000447216 INF2Q27J81 1249 aa20.55■□□□□ 0.88
TRAPPC4-203ENST00000447216 ARHGEF16Q5VV41 709 aa20.55■□□□□ 0.88
TRAPPC4-203ENST00000447216 NOSTRINQ8IVI9 506 aa20.55■□□□□ 0.88
TRAPPC4-203ENST00000447216 TEX2Q8IWB9 1127 aa20.55■□□□□ 0.88
TRAPPC4-203ENST00000447216 RPTORQ8N122 1335 aa20.54■□□□□ 0.88
TRAPPC4-203ENST00000447216 ALDH5A1P51649 535 aaPredicted RBP20.54■□□□□ 0.88
TRAPPC4-203ENST00000447216 PRKCZQ05513 592 aa20.54■□□□□ 0.88
TRAPPC4-203ENST00000447216 NONOQ15233 471 aaKnown RBP eCLIP20.54■□□□□ 0.88
TRAPPC4-203ENST00000447216 TBCKQ8TEA7 893 aa20.54■□□□□ 0.88
TRAPPC4-203ENST00000447216 SOCS4Q8WXH5 440 aa20.54■□□□□ 0.88
TRAPPC4-203ENST00000447216 ZFP91Q96JP5 570 aaPredicted RBP20.54■□□□□ 0.88
TRAPPC4-203ENST00000447216 FRMPD4Q14CM0 1322 aa20.53■□□□□ 0.88
TRAPPC4-203ENST00000447216 F13A1P00488 732 aa20.53■□□□□ 0.88
TRAPPC4-203ENST00000447216 RGS2P41220 211 aa20.53■□□□□ 0.88
TRAPPC4-203ENST00000447216 FLT3LGP49771 235 aa20.53■□□□□ 0.88
TRAPPC4-203ENST00000447216 PGM5Q15124 567 aa20.53■□□□□ 0.88
TRAPPC4-203ENST00000447216 MCTP2Q6DN12 878 aa20.53■□□□□ 0.88
TRAPPC4-203ENST00000447216 FAM173BQ6P4H8 233 aa20.53■□□□□ 0.88
TRAPPC4-203ENST00000447216 NSUN6Q8TEA1 469 aaKnown RBP20.53■□□□□ 0.88
TRAPPC4-203ENST00000447216 PDCD2LQ9BRP1 358 aa20.53■□□□□ 0.88
TRAPPC4-203ENST00000447216 EHMT1Q9H9B1 1298 aa20.53■□□□□ 0.88
TRAPPC4-203ENST00000447216 EDIL3O43854 480 aa20.52■□□□□ 0.88
TRAPPC4-203ENST00000447216 MYCLP12524 364 aaPredicted RBP20.52■□□□□ 0.88
TRAPPC4-203ENST00000447216 ATP2B1P20020 1258 aa20.52■□□□□ 0.88
TRAPPC4-203ENST00000447216 SREBF1P36956 1147 aa20.52■□□□□ 0.88
TRAPPC4-203ENST00000447216 LBX1P52954 281 aa20.52■□□□□ 0.88
TRAPPC4-203ENST00000447216 ARHGAP4P98171 946 aa20.52■□□□□ 0.88
TRAPPC4-203ENST00000447216 CCL14Q16627 93 aa20.52■□□□□ 0.88
TRAPPC4-203ENST00000447216 DNERQ8NFT8 737 aa20.52■□□□□ 0.88
TRAPPC4-203ENST00000447216 MAML3Q96JK9 1138 aa20.52■□□□□ 0.88
TRAPPC4-203ENST00000447216 APBA2Q99767 749 aa20.52■□□□□ 0.88
TRAPPC4-203ENST00000447216 FLRT1Q9NZU1 646 aa20.52■□□□□ 0.88
TRAPPC4-203ENST00000447216 ADD3Q9UEY8 706 aaKnown RBP20.52■□□□□ 0.88
TRAPPC4-203ENST00000447216 SRRDQ9UH36 339 aa20.52■□□□□ 0.88
TRAPPC4-203ENST00000447216 CIZ1Q9ULV3 898 aaPredicted RBP20.52■□□□□ 0.88
TRAPPC4-203ENST00000447216 DOCK5Q9H7D0 1870 aa20.52■□□□□ 0.87
TRAPPC4-203ENST00000447216 WNT7AO00755 349 aa20.51■□□□□ 0.87
TRAPPC4-203ENST00000447216 NR3C2P08235 984 aa20.51■□□□□ 0.87
TRAPPC4-203ENST00000447216 HOXC6P09630 235 aa20.51■□□□□ 0.87
TRAPPC4-203ENST00000447216 PDIA4P13667 645 aaKnown RBP20.51■□□□□ 0.87
TRAPPC4-203ENST00000447216 CTCFP49711 727 aaPredicted RBP20.51■□□□□ 0.87
TRAPPC4-203ENST00000447216 NUCB2P80303 420 aa20.51■□□□□ 0.87
TRAPPC4-203ENST00000447216 FOXD4L6Q3SYB3 417 aaPredicted RBP20.51■□□□□ 0.87
TRAPPC4-203ENST00000447216 FOXD4L3Q6VB84 417 aaPredicted RBP20.51■□□□□ 0.87
TRAPPC4-203ENST00000447216 PPP4R3CPQ6ZMV5 832 aa20.51■□□□□ 0.87
TRAPPC4-203ENST00000447216 PIAS4Q8N2W9 510 aaPredicted RBP20.51■□□□□ 0.87
TRAPPC4-203ENST00000447216 SLC5A4Q9NY91 659 aa20.51■□□□□ 0.87
TRAPPC4-203ENST00000447216 CHMP5Q9NZZ3 219 aa20.51■□□□□ 0.87
TRAPPC4-203ENST00000447216 TRIM17Q9Y577 477 aa20.51■□□□□ 0.87
TRAPPC4-203ENST00000447216 HOXD10P28358 340 aa20.5■□□□□ 0.87
TRAPPC4-203ENST00000447216 NBR1Q14596 966 aa20.5■□□□□ 0.87
TRAPPC4-203ENST00000447216 ARHGEF6Q15052 776 aa20.5■□□□□ 0.87
TRAPPC4-203ENST00000447216 OTOP1Q7RTM1 612 aa20.5■□□□□ 0.87
TRAPPC4-203ENST00000447216 BRAPQ7Z569 592 aa20.5■□□□□ 0.87
TRAPPC4-203ENST00000447216 CRYGNQ8WXF5 182 aa20.5■□□□□ 0.87
TRAPPC4-203ENST00000447216 ZSCAN16Q9H4T2 348 aaPredicted RBP20.5■□□□□ 0.87
TRAPPC4-203ENST00000447216 DIS3Q9Y2L1 958 aaKnown RBP20.5■□□□□ 0.87
TRAPPC4-203ENST00000447216 CCND2P30279 289 aa20.49■□□□□ 0.87
TRAPPC4-203ENST00000447216 TOB1P50616 345 aaPredicted RBP20.49■□□□□ 0.87
TRAPPC4-203ENST00000447216 MRPS9P82933 396 aaKnown RBP20.49■□□□□ 0.87
TRAPPC4-203ENST00000447216 PDE4DQ08499 809 aa20.49■□□□□ 0.87
TRAPPC4-203ENST00000447216 LETM2Q2VYF4 491 aa20.49■□□□□ 0.87
TRAPPC4-203ENST00000447216 MYSM1Q5VVJ2 828 aa20.49■□□□□ 0.87
TRAPPC4-203ENST00000447216 ZNF467Q7Z7K2 595 aaPredicted RBP20.49■□□□□ 0.87
TRAPPC4-203ENST00000447216 NEK8Q86SG6 692 aa20.49■□□□□ 0.87
TRAPPC4-203ENST00000447216 IWS1Q96ST2 819 aa20.49■□□□□ 0.87
TRAPPC4-203ENST00000447216 RTEL1Q9NZ71 1219 aa20.49■□□□□ 0.87
TRAPPC4-203ENST00000447216 ASB14A6NK59 587 aa20.48■□□□□ 0.87
TRAPPC4-203ENST00000447216 TDP2O95551 362 aa20.48■□□□□ 0.87
TRAPPC4-203ENST00000447216 GNRH1P01148 92 aa20.48■□□□□ 0.87
TRAPPC4-203ENST00000447216 EDNRBP24530 442 aa20.48■□□□□ 0.87
TRAPPC4-203ENST00000447216 PCNX4Q63HM2 1172 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms