RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 ADD1P35611 737 aaKnown RBP17.13■□□□□ 0.33
HDAC4-204ENST00000446876 BEX3Q00994 111 aa17.13■□□□□ 0.33
HDAC4-204ENST00000446876 TRAF1Q13077 416 aa17.13■□□□□ 0.33
HDAC4-204ENST00000446876 ARHGEF16Q5VV41 709 aa17.13■□□□□ 0.33
HDAC4-204ENST00000446876 TLK2Q86UE8 772 aa17.13■□□□□ 0.33
HDAC4-204ENST00000446876 KLHDC9Q8NEP7 349 aa17.13■□□□□ 0.33
HDAC4-204ENST00000446876 IL31RAQ8NI17 732 aa17.13■□□□□ 0.33
HDAC4-204ENST00000446876 NSUN6Q8TEA1 469 aaKnown RBP17.13■□□□□ 0.33
HDAC4-204ENST00000446876 TM6SF1Q9BZW5 370 aa17.13■□□□□ 0.33
HDAC4-204ENST00000446876 MAF1Q9H063 256 aa17.13■□□□□ 0.33
HDAC4-204ENST00000446876 UPF3AQ9H1J1 476 aaKnown RBP17.13■□□□□ 0.33
HDAC4-204ENST00000446876 PHF24Q9UPV7 400 aa17.13■□□□□ 0.33
HDAC4-204ENST00000446876 GNEQ9Y223 722 aaKnown RBP17.13■□□□□ 0.33
HDAC4-204ENST00000446876 CTAGE5O15320 804 aa17.12■□□□□ 0.33
HDAC4-204ENST00000446876 PPFIA3O75145 1194 aa17.12■□□□□ 0.33
HDAC4-204ENST00000446876 RCAN1P53805 252 aa17.12■□□□□ 0.33
HDAC4-204ENST00000446876 GJA9P57773 515 aa17.12■□□□□ 0.33
HDAC4-204ENST00000446876 C8orf34Q49A92 452 aa17.12■□□□□ 0.33
HDAC4-204ENST00000446876 WWC2Q6AWC2 1192 aa17.12■□□□□ 0.33
HDAC4-204ENST00000446876 USP17L6PQ6QN14 398 aa17.12■□□□□ 0.33
HDAC4-204ENST00000446876 HEATR3Q7Z4Q2 680 aa17.12■□□□□ 0.33
HDAC4-204ENST00000446876 FBXL16Q8N461 479 aa17.12■□□□□ 0.33
HDAC4-204ENST00000446876 ZFP91Q96JP5 570 aaPredicted RBP17.12■□□□□ 0.33
HDAC4-204ENST00000446876 MPHOSPH6Q99547 160 aaKnown RBP17.12■□□□□ 0.33
HDAC4-204ENST00000446876 WDR11Q9BZH6 1224 aa17.12■□□□□ 0.33
HDAC4-204ENST00000446876 NCOA5Q9HCD5 579 aaKnown RBP17.12■□□□□ 0.33
HDAC4-204ENST00000446876 NID2Q14112 1375 aa17.12■□□□□ 0.33
HDAC4-204ENST00000446876 A0A1W2PQ45 241 aaPredicted RBP17.11■□□□□ 0.33
HDAC4-204ENST00000446876 A0A1W2PQY0 241 aa17.11■□□□□ 0.33
HDAC4-204ENST00000446876 RBM47A0AV96 593 aaKnown RBP17.11■□□□□ 0.33
HDAC4-204ENST00000446876 DYNC1LI2O43237 492 aaPredicted RBP17.11■□□□□ 0.33
HDAC4-204ENST00000446876 ARIH2O95376 493 aa17.11■□□□□ 0.33
HDAC4-204ENST00000446876 MYCLP12524 364 aaPredicted RBP17.11■□□□□ 0.33
HDAC4-204ENST00000446876 CCT2P78371 535 aaKnown RBP17.11■□□□□ 0.33
HDAC4-204ENST00000446876 KCNA10Q16322 511 aa17.11■□□□□ 0.33
HDAC4-204ENST00000446876 IQSEC1Q6DN90 963 aa17.11■□□□□ 0.33
HDAC4-204ENST00000446876 CCSAPQ6IQ19 270 aaPredicted RBP17.11■□□□□ 0.33
HDAC4-204ENST00000446876 TYW1BQ6NUM6 668 aa17.11■□□□□ 0.33
HDAC4-204ENST00000446876 SEPT14Q6ZU15 432 aa17.11■□□□□ 0.33
HDAC4-204ENST00000446876 COPS5Q92905 334 aa17.11■□□□□ 0.33
HDAC4-204ENST00000446876 PDCD2LQ9BRP1 358 aa17.11■□□□□ 0.33
HDAC4-204ENST00000446876 PDRG1Q9NUG6 133 aa17.11■□□□□ 0.33
HDAC4-204ENST00000446876 ZMYND8Q9ULU4 1186 aaPredicted RBP17.11■□□□□ 0.33
HDAC4-204ENST00000446876 V9GY48 417 aaPredicted RBP17.11■□□□□ 0.33
HDAC4-204ENST00000446876 CEP290O15078 2479 aa17.1■□□□□ 0.33
HDAC4-204ENST00000446876 B4DLN1 442 aa17.1■□□□□ 0.33
HDAC4-204ENST00000446876 NR3C2P08235 984 aa17.1■□□□□ 0.33
HDAC4-204ENST00000446876 CST5P28325 142 aaPredicted RBP17.1■□□□□ 0.33
HDAC4-204ENST00000446876 PDIA3P30101 505 aaKnown RBP17.1■□□□□ 0.33
HDAC4-204ENST00000446876 MRPL12P52815 198 aaKnown RBP17.1■□□□□ 0.33
HDAC4-204ENST00000446876 ACLYP53396 1101 aa17.1■□□□□ 0.33
HDAC4-204ENST00000446876 RTP1P59025 263 aa17.1■□□□□ 0.33
HDAC4-204ENST00000446876 PGM5Q15124 567 aa17.1■□□□□ 0.33
HDAC4-204ENST00000446876 STXBP2Q15833 593 aa17.1■□□□□ 0.33
HDAC4-204ENST00000446876 UBE2SQ16763 222 aa17.1■□□□□ 0.33
HDAC4-204ENST00000446876 DUSP28Q4G0W2 176 aa17.1■□□□□ 0.33
HDAC4-204ENST00000446876 GNASQ5JWF2 1037 aa17.1■□□□□ 0.33
HDAC4-204ENST00000446876 SLC39A5Q6ZMH5 540 aa17.1■□□□□ 0.33
HDAC4-204ENST00000446876 IWS1Q96ST2 819 aa17.1■□□□□ 0.33
HDAC4-204ENST00000446876 SPC25Q9HBM1 224 aa17.1■□□□□ 0.33
HDAC4-204ENST00000446876 MAP3K20Q9NYL2 800 aaKnown RBP17.1■□□□□ 0.33
HDAC4-204ENST00000446876 NR2E3Q9Y5X4 410 aa17.1■□□□□ 0.33
HDAC4-204ENST00000446876 MYH7BA7E2Y1 1941 aa17.09■□□□□ 0.33
HDAC4-204ENST00000446876 MEIS2O14770 477 aa17.09■□□□□ 0.33
HDAC4-204ENST00000446876 ASGR1P07306 291 aa17.09■□□□□ 0.33
HDAC4-204ENST00000446876 SYN1P17600 705 aa17.09■□□□□ 0.33
HDAC4-204ENST00000446876 EVCP57679 992 aa17.09■□□□□ 0.33
HDAC4-204ENST00000446876 ANAPC15P60006 121 aa17.09■□□□□ 0.33
HDAC4-204ENST00000446876 PPP2R5BQ15173 497 aa17.09■□□□□ 0.33
HDAC4-204ENST00000446876 FSCN1Q16658 493 aaKnown RBP17.09■□□□□ 0.33
HDAC4-204ENST00000446876 TRIM60Q495X7 471 aa17.09■□□□□ 0.33
HDAC4-204ENST00000446876 SAMD3Q8N6K7 520 aa17.09■□□□□ 0.33
HDAC4-204ENST00000446876 SMARCC2Q8TAQ2 1214 aa17.09■□□□□ 0.33
HDAC4-204ENST00000446876 SCFD2Q8WU76 684 aa17.09■□□□□ 0.33
HDAC4-204ENST00000446876 CUL5Q93034 780 aa17.09■□□□□ 0.33
HDAC4-204ENST00000446876 PHKBQ93100 1093 aa17.09■□□□□ 0.33
HDAC4-204ENST00000446876 TSEN34Q9BSV6 310 aaKnown RBP17.09■□□□□ 0.33
HDAC4-204ENST00000446876 AP5M1Q9H0R1 490 aa17.09■□□□□ 0.33
HDAC4-204ENST00000446876 ATP11BQ9Y2G3 1177 aa17.09■□□□□ 0.33
HDAC4-204ENST00000446876 DOCK5Q9H7D0 1870 aa17.08■□□□□ 0.33
HDAC4-204ENST00000446876 STXBP3O00186 592 aa17.08■□□□□ 0.32
HDAC4-204ENST00000446876 TXNP10599 105 aaKnown RBP17.08■□□□□ 0.32
HDAC4-204ENST00000446876 NAPAP54920 295 aa17.08■□□□□ 0.32
HDAC4-204ENST00000446876 STK3Q13188 491 aa17.08■□□□□ 0.32
HDAC4-204ENST00000446876 OR6J1Q8NGC5 347 aa17.08■□□□□ 0.32
HDAC4-204ENST00000446876 PSTPIP2Q9H939 334 aa17.08■□□□□ 0.32
HDAC4-204ENST00000446876 DNAH12Q6ZR08 3092 aa17.08■□□□□ 0.32
HDAC4-204ENST00000446876 FRMPD4Q14CM0 1322 aa17.07■□□□□ 0.32
HDAC4-204ENST00000446876 CCDC196A0A1B0GTZ2 297 aa17.07■□□□□ 0.32
HDAC4-204ENST00000446876 MOXD2PA6NHM9 499 aa17.07■□□□□ 0.32
HDAC4-204ENST00000446876 RGS20O76081 388 aa17.07■□□□□ 0.32
HDAC4-204ENST00000446876 NKX3-2P78367 333 aa17.07■□□□□ 0.32
HDAC4-204ENST00000446876 TTLL4Q14679 1199 aa17.07■□□□□ 0.32
HDAC4-204ENST00000446876 SNX17Q15036 470 aa17.07■□□□□ 0.32
HDAC4-204ENST00000446876 NTRK3Q16288 839 aa17.07■□□□□ 0.32
HDAC4-204ENST00000446876 LY6KQ17RY6 165 aa17.07■□□□□ 0.32
HDAC4-204ENST00000446876 CCDC62Q6P9F0 684 aa17.07■□□□□ 0.32
HDAC4-204ENST00000446876 CXCL17Q6UXB2 119 aa17.07■□□□□ 0.32
HDAC4-204ENST00000446876 PCSK9Q8NBP7 692 aaKnown RBP17.07■□□□□ 0.32
HDAC4-204ENST00000446876 STARD7Q9NQZ5 370 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms