RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 CLSTN2Q9H4D0 955 aa12.79□□□□□ -0.36
FN1-212ENST00000446046 KMT5AQ9NQR1 393 aa12.79□□□□□ -0.36
FN1-212ENST00000446046 CLTCL1P53675 1640 aa12.79□□□□□ -0.36
FN1-212ENST00000446046 FDX1P10109 184 aa12.79□□□□□ -0.36
FN1-212ENST00000446046 MFAP3P55082 362 aa12.79□□□□□ -0.36
FN1-212ENST00000446046 FANCCQ00597 558 aa12.79□□□□□ -0.36
FN1-212ENST00000446046 BEND3Q5T5X7 828 aa12.79□□□□□ -0.36
FN1-212ENST00000446046 NEDD9Q14511 834 aa12.79□□□□□ -0.36
FN1-212ENST00000446046 ARL13BQ3SXY8 428 aa12.79□□□□□ -0.36
FN1-212ENST00000446046 C4orf50Q6ZRC1 276 aa12.79□□□□□ -0.36
FN1-212ENST00000446046 TMEM179Q6ZVK1 233 aa12.79□□□□□ -0.36
FN1-212ENST00000446046 SESTD1Q86VW0 696 aa12.79□□□□□ -0.36
FN1-212ENST00000446046 ACCSQ96QU6 501 aa12.79□□□□□ -0.36
FN1-212ENST00000446046 BSDC1Q9NW68 430 aaPredicted RBP12.79□□□□□ -0.36
FN1-212ENST00000446046 PCDHB4Q9Y5E5 795 aa12.79□□□□□ -0.36
FN1-212ENST00000446046 MYH9P35579 1960 aaKnown RBP12.79□□□□□ -0.36
FN1-212ENST00000446046 C10orf76Q5T2E6 689 aa12.79□□□□□ -0.36
FN1-212ENST00000446046 RAD17O75943 681 aa12.78□□□□□ -0.36
FN1-212ENST00000446046 GSTA1P08263 222 aa12.78□□□□□ -0.36
FN1-212ENST00000446046 GSTA2P09210 222 aa12.78□□□□□ -0.36
FN1-212ENST00000446046 KRT15P19012 456 aa12.78□□□□□ -0.36
FN1-212ENST00000446046 GTF2F1P35269 517 aaKnown RBP eCLIP12.78□□□□□ -0.364e-10■■■■□ 25.6
FN1-212ENST00000446046 ABCC12Q96J65 1359 aa12.78□□□□□ -0.36
FN1-212ENST00000446046 FGAP02671 866 aa12.78□□□□□ -0.36
FN1-212ENST00000446046 HSPD1P10809 573 aaKnown RBP12.78□□□□□ -0.36
FN1-212ENST00000446046 RRAGAQ7L523 313 aa12.78□□□□□ -0.36
FN1-212ENST00000446046 PHLDB2Q86SQ0 1253 aa12.78□□□□□ -0.36
FN1-212ENST00000446046 ASAP1Q9ULH1 1129 aa12.78□□□□□ -0.36
FN1-212ENST00000446046 SETBP1Q9Y6X0 1596 aa12.78□□□□□ -0.36
FN1-212ENST00000446046 CLRN2A0PK11 232 aa12.78□□□□□ -0.36
FN1-212ENST00000446046 MMP10P09238 476 aa12.78□□□□□ -0.36
FN1-212ENST00000446046 LRRC4Q9HBW1 653 aa12.78□□□□□ -0.36
FN1-212ENST00000446046 RAB44Q7Z6P3 723 aaPredicted RBP12.78□□□□□ -0.36
FN1-212ENST00000446046 RPUSD2Q8IZ73 545 aaKnown RBP12.78□□□□□ -0.36
FN1-212ENST00000446046 TCHHQ07283 1943 aa12.78□□□□□ -0.36
FN1-212ENST00000446046 CAPN2P17655 700 aa12.78□□□□□ -0.36
FN1-212ENST00000446046 MNAT1P51948 309 aa12.78□□□□□ -0.36
FN1-212ENST00000446046 CEP85LQ5SZL2 805 aa12.78□□□□□ -0.36
FN1-212ENST00000446046 NLRP10Q86W26 655 aa12.78□□□□□ -0.36
FN1-212ENST00000446046 SUGT1Q9Y2Z0 365 aa12.78□□□□□ -0.36
FN1-212ENST00000446046 NFE2L3Q9Y4A8 694 aa12.78□□□□□ -0.36
FN1-212ENST00000446046 PSMC2P35998 433 aaKnown RBP12.77□□□□□ -0.36
FN1-212ENST00000446046 IRX5P78411 483 aaPredicted RBP12.77□□□□□ -0.36
FN1-212ENST00000446046 NME8Q8N427 588 aa12.77□□□□□ -0.36
FN1-212ENST00000446046 RDH13Q8NBN7 331 aa12.77□□□□□ -0.36
FN1-212ENST00000446046 CCHCR1Q8TD31 782 aa12.77□□□□□ -0.36
FN1-212ENST00000446046 ZNF341Q9BYN7 854 aa12.77□□□□□ -0.36
FN1-212ENST00000446046 RPF1Q9H9Y2 349 aaKnown RBP12.77□□□□□ -0.36
FN1-212ENST00000446046 LCMT1Q9UIC8 334 aa12.77□□□□□ -0.36
FN1-212ENST00000446046 ZKSCAN5Q9Y2L8 839 aa12.77□□□□□ -0.36
FN1-212ENST00000446046 RLBP1P12271 317 aa12.77□□□□□ -0.36
FN1-212ENST00000446046 NSFP46459 744 aaKnown RBP12.77□□□□□ -0.36
FN1-212ENST00000446046 MORC3Q14149 939 aa12.77□□□□□ -0.36
FN1-212ENST00000446046 PDXDC2PQ6P474 469 aa12.77□□□□□ -0.36
FN1-212ENST00000446046 BAG5Q9UL15 447 aa12.77□□□□□ -0.36
FN1-212ENST00000446046 RHOXF2BP0C7M4 288 aa12.77□□□□□ -0.37
FN1-212ENST00000446046 MYL7Q01449 175 aa12.77□□□□□ -0.37
FN1-212ENST00000446046 CDC37Q16543 378 aaPredicted RBP12.77□□□□□ -0.37
FN1-212ENST00000446046 RHOXF2Q9BQY4 288 aa12.77□□□□□ -0.37
FN1-212ENST00000446046 PCDHA4Q9UN74 947 aa12.77□□□□□ -0.37
FN1-212ENST00000446046 GRIN3BO60391 1043 aa12.77□□□□□ -0.37
FN1-212ENST00000446046 JAK3P52333 1124 aa12.77□□□□□ -0.37
FN1-212ENST00000446046 OR8K1Q8NGG5 319 aa12.77□□□□□ -0.37
FN1-212ENST00000446046 ZNF526Q8TF50 670 aaPredicted RBP12.77□□□□□ -0.37
FN1-212ENST00000446046 NT5C1BQ96P26 610 aa12.77□□□□□ -0.37
FN1-212ENST00000446046 HOMER3Q9NSC5 361 aa12.77□□□□□ -0.37
FN1-212ENST00000446046 KCNJ14Q9UNX9 436 aa12.77□□□□□ -0.37
FN1-212ENST00000446046 GTPBP6O43824 516 aaPredicted RBP12.77□□□□□ -0.37
FN1-212ENST00000446046 KPNA2P52292 529 aaKnown RBP12.77□□□□□ -0.37
FN1-212ENST00000446046 NELFCDQ8IXH7 590 aa12.77□□□□□ -0.37
FN1-212ENST00000446046 TRIM62Q9BVG3 475 aa12.77□□□□□ -0.37
FN1-212ENST00000446046 MRPL47Q9HD33 250 aaKnown RBP12.77□□□□□ -0.37
FN1-212ENST00000446046 KCNJ18B7U540 433 aa12.77□□□□□ -0.37
FN1-212ENST00000446046 KCNJ12Q14500 433 aa12.77□□□□□ -0.37
FN1-212ENST00000446046 ZC3H15Q8WU90 426 aaKnown RBP12.77□□□□□ -0.37
FN1-212ENST00000446046 DCAF4Q8WV16 495 aa12.77□□□□□ -0.37
FN1-212ENST00000446046 DBNDD1Q9H9R9 158 aa12.77□□□□□ -0.37
FN1-212ENST00000446046 ABCC4O15439 1325 aa12.77□□□□□ -0.37
FN1-212ENST00000446046 IFRD2Q12894 506 aaPredicted RBP12.76□□□□□ -0.37
FN1-212ENST00000446046 RNF219Q5W0B1 726 aaPredicted RBP12.76□□□□□ -0.37
FN1-212ENST00000446046 KCNV1Q6PIU1 500 aa12.76□□□□□ -0.37
FN1-212ENST00000446046 PPM1KQ8N3J5 372 aa12.76□□□□□ -0.37
FN1-212ENST00000446046 RYBPQ8N488 228 aaPredicted RBP12.76□□□□□ -0.37
FN1-212ENST00000446046 SLC38A10Q9HBR0 1119 aa12.76□□□□□ -0.37
FN1-212ENST00000446046 CEP104O60308 925 aa12.76□□□□□ -0.37
FN1-212ENST00000446046 KRT33BQ14525 404 aa12.76□□□□□ -0.37
FN1-212ENST00000446046 ZBTB33Q86T24 672 aa12.76□□□□□ -0.37
FN1-212ENST00000446046 MCUR1Q96AQ8 359 aa12.76□□□□□ -0.37
FN1-212ENST00000446046 LDHAP00338 332 aaKnown RBP12.76□□□□□ -0.37
FN1-212ENST00000446046 ASPHQ12797 758 aa12.76□□□□□ -0.37
FN1-212ENST00000446046 EXOC3L4Q17RC7 722 aa12.76□□□□□ -0.37
FN1-212ENST00000446046 CALR3Q96L12 384 aaKnown RBP12.76□□□□□ -0.37
FN1-212ENST00000446046 KIAA1024Q9UPX6 916 aa12.76□□□□□ -0.37
FN1-212ENST00000446046 TRPV6Q9H1D0 765 aa12.76□□□□□ -0.37
FN1-212ENST00000446046 SEPT10Q9P0V9 454 aa12.76□□□□□ -0.37
FN1-212ENST00000446046 PTGDRQ13258 359 aa12.76□□□□□ -0.37
FN1-212ENST00000446046 PPP4R3CPQ6ZMV5 832 aa12.76□□□□□ -0.37
FN1-212ENST00000446046 MICAL1Q8TDZ2 1067 aa12.76□□□□□ -0.37
FN1-212ENST00000446046 PARVGQ9HBI0 331 aa12.76□□□□□ -0.37
FN1-212ENST00000446046 ERBB3P21860 1342 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms