RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 PCYOX1LQ8NBM8 494 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 PCSK9Q8NBP7 692 aaKnown RBP3.12□□□□□ -1.91
UBBP3-201ENST00000445497 DENND6BQ8NEG7 585 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 TNIP2Q8NFZ5 429 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 LILRB1Q8NHL6 650 aaPredicted RBP3.12□□□□□ -1.91
UBBP3-201ENST00000445497 PPP1R14CQ8TAE6 165 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 DEPTORQ8TB45 409 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 ACMSDQ8TDX5 336 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 OTUD7AQ8TE49 926 aaPredicted RBP3.12□□□□□ -1.91
UBBP3-201ENST00000445497 EPS8L1Q8TE68 723 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 CENPIQ92674 756 aaPredicted RBP3.12□□□□□ -1.91
UBBP3-201ENST00000445497 KIF1BPQ96EK5 621 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 RADILQ96JH8 1075 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 DHRS1Q96LJ7 313 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 JAKMIP1Q96N16 626 aaKnown RBP3.12□□□□□ -1.91
UBBP3-201ENST00000445497 IPO9Q96P70 1041 aaKnown RBP3.12□□□□□ -1.91
UBBP3-201ENST00000445497 ASB2Q96Q27 587 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 CSRNP1Q96S65 589 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 HAUS7Q99871 368 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 GPATCH1Q9BRR8 931 aaKnown RBP3.12□□□□□ -1.91
UBBP3-201ENST00000445497 RSRP1Q9BUV0 290 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 HERC2P3Q9BVR0 1158 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 NT5C1AQ9BXI3 368 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 TRIM5Q9C035 493 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 SLC7A5P2Q9GIP4 190 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 NIF3L1Q9GZT8 377 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 TNKS2Q9H2K2 1166 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 PNNQ9H307 717 aaKnown RBP3.12□□□□□ -1.91
UBBP3-201ENST00000445497 VCX3BQ9H321 246 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 KCTD10Q9H3F6 313 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 OCEL1Q9H607 264 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 NRDE2Q9H7Z3 1164 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.12□□□□□ -1.91
UBBP3-201ENST00000445497 GRPEL1Q9HAV7 217 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 BMP2KQ9NSY1 1161 aaPredicted RBP3.12□□□□□ -1.91
UBBP3-201ENST00000445497 PPP1R14DQ9NXH3 145 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 TEKT2Q9UIF3 430 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 SLC13A4Q9UKG4 626 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 TRHDEQ9UKU6 1024 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 GRID1Q9ULK0 1009 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 HPCAL4Q9UM19 191 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 C19orf53Q9UNZ5 99 aaPredicted RBP3.12□□□□□ -1.91
UBBP3-201ENST00000445497 GPR34Q9UPC5 381 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 TRAK1Q9UPV9 953 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 CRYL1Q9Y2S2 319 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 PCDHGB3Q9Y5G1 929 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 UNC13AQ9UPW8 1703 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 ZNF804BA4D1E1 1349 aa3.12□□□□□ -1.91
UBBP3-201ENST00000445497 A0A0B4J269 797 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 CLRN2A0PK11 232 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 C19orf67A6NJJ6 358 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 B4E171 279 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 PI4K2BG5E9Z4 385 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 H0Y626 953 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 CETN3O15182 167 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 SPTLC2O15270 562 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 TLR3O15455 904 aaKnown RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 SLC7A4O43246 635 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 EVI5O60447 810 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 NOL3O60936 208 aaKnown RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 TNFRSF21O75509 655 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 TGDSO95455 350 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 DNTTP04053 509 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 PCSK2P16519 638 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 HSPA6P17066 643 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 HDCP19113 662 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 IGFBP4P22692 258 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 SFPQP23246 707 aaKnown RBP eCLIP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 ATP5F1P24539 256 aaPredicted RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 YY1P25490 414 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 NOS3P29474 1203 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 SKIV2L2P42285 1042 aaKnown RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 MTHFRP42898 656 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 IFNAR2P48551 515 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 ALDH5A1P51649 535 aaPredicted RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 GTF2A1P52655 376 aaPredicted RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 RCAN1P53805 252 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 RNASE9P60153 205 aaKnown RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 IRX5P78411 483 aaPredicted RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 TNFAIP2Q03169 654 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 PDE4BQ07343 736 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 KCNH2Q12809 1159 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 IFIT5Q13325 482 aaKnown RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 GRM3Q14832 879 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 PKN1Q16512 942 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 TAF12Q16514 161 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 ATP13A4Q4VNC1 1196 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 FNDC3BQ53EP0 1204 aaKnown RBP3.11□□□□□ -1.91
UBBP3-201ENST00000445497 KRBOX4Q5JUW0 171 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 TMEM240Q5SV17 173 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 IER5LQ5T953 404 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 DPY19L2Q6NUT2 758 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 C16orf46Q6P387 395 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 PACS1Q6VY07 963 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 CCDC149Q6ZUS6 474 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 ENOSF1Q7L5Y1 443 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 ZER1Q7Z7L7 766 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 RSPH3Q86UC2 560 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 SPATA24Q86W54 205 aa3.11□□□□□ -1.91
UBBP3-201ENST00000445497 SLC41A1Q8IVJ1 513 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms