RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 ATP6V1DQ9Y5K8 247 aa17.25■□□□□ 0.35
CCNE1-203ENST00000444983 PLXNA1Q9UIW2 1896 aa17.24■□□□□ 0.35
CCNE1-203ENST00000444983 USP11P51784 963 aa17.24■□□□□ 0.35
CCNE1-203ENST00000444983 CNTN2Q02246 1040 aa17.24■□□□□ 0.35
CCNE1-203ENST00000444983 MORN1Q5T089 497 aa17.24■□□□□ 0.35
CCNE1-203ENST00000444983 DNERQ8NFT8 737 aa17.24■□□□□ 0.35
CCNE1-203ENST00000444983 USP6NLQ92738 828 aa17.24■□□□□ 0.35
CCNE1-203ENST00000444983 CHAMP1Q96JM3 812 aa17.24■□□□□ 0.35
CCNE1-203ENST00000444983 RMDN3Q96TC7 470 aa17.24■□□□□ 0.35
CCNE1-203ENST00000444983 PXMP2Q9NR77 195 aa17.24■□□□□ 0.35
CCNE1-203ENST00000444983 WBP1LQ9NX94 342 aa17.24■□□□□ 0.35
CCNE1-203ENST00000444983 ZSWIM8A7E2V4 1837 aa17.24■□□□□ 0.35
CCNE1-203ENST00000444983 SOWAHBA6NEL2 793 aa17.23■□□□□ 0.35
CCNE1-203ENST00000444983 SLC15A5A6NIM6 579 aa17.23■□□□□ 0.35
CCNE1-203ENST00000444983 PGK2P07205 417 aa17.23■□□□□ 0.35
CCNE1-203ENST00000444983 ADORA2AP29274 412 aa17.23■□□□□ 0.35
CCNE1-203ENST00000444983 CIITAP33076 1130 aa17.23■□□□□ 0.35
CCNE1-203ENST00000444983 ARHGAP4P98171 946 aa17.23■□□□□ 0.35
CCNE1-203ENST00000444983 CAP1Q01518 475 aa17.23■□□□□ 0.35
CCNE1-203ENST00000444983 DNM1Q05193 864 aaKnown RBP17.23■□□□□ 0.35
CCNE1-203ENST00000444983 WDR78Q5VTH9 848 aa17.23■□□□□ 0.35
CCNE1-203ENST00000444983 NEK8Q86SG6 692 aa17.23■□□□□ 0.35
CCNE1-203ENST00000444983 PDCD2LQ9BRP1 358 aa17.23■□□□□ 0.35
CCNE1-203ENST00000444983 GJD2Q9UKL4 321 aa17.23■□□□□ 0.35
CCNE1-203ENST00000444983 CYP3A7-CYP3A51PA0A087WV96 503 aa17.23■□□□□ 0.35
CCNE1-203ENST00000444983 COBLO75128 1261 aa17.23■□□□□ 0.35
CCNE1-203ENST00000444983 CYP3A7P24462 503 aa17.23■□□□□ 0.35
CCNE1-203ENST00000444983 SP3Q02447 781 aa17.23■□□□□ 0.35
CCNE1-203ENST00000444983 PGM5Q15124 567 aa17.23■□□□□ 0.35
CCNE1-203ENST00000444983 ZNF792Q3KQV3 632 aa17.23■□□□□ 0.35
CCNE1-203ENST00000444983 ATL3Q6DD88 541 aa17.23■□□□□ 0.35
CCNE1-203ENST00000444983 CCAR1Q8IX12 1150 aaKnown RBP17.23■□□□□ 0.35
CCNE1-203ENST00000444983 NSUN6Q8TEA1 469 aaKnown RBP17.23■□□□□ 0.35
CCNE1-203ENST00000444983 MBOAT7Q96N66 472 aa17.23■□□□□ 0.35
CCNE1-203ENST00000444983 USP28Q96RU2 1077 aa17.23■□□□□ 0.35
CCNE1-203ENST00000444983 IVNS1ABPQ9Y6Y0 642 aa17.23■□□□□ 0.35
CCNE1-203ENST00000444983 POTEB2H3BUK9 544 aa17.22■□□□□ 0.35
CCNE1-203ENST00000444983 GPR25O00155 361 aa17.22■□□□□ 0.35
CCNE1-203ENST00000444983 EDNRBP24530 442 aa17.22■□□□□ 0.35
CCNE1-203ENST00000444983 PCNX4Q63HM2 1172 aa17.22■□□□□ 0.35
CCNE1-203ENST00000444983 PPP4R3AQ6IN85 833 aa17.22■□□□□ 0.35
CCNE1-203ENST00000444983 MOXD1Q6UVY6 613 aa17.22■□□□□ 0.35
CCNE1-203ENST00000444983 VSIG10LQ86VR7 867 aa17.22■□□□□ 0.35
CCNE1-203ENST00000444983 IL31RAQ8NI17 732 aa17.22■□□□□ 0.35
CCNE1-203ENST00000444983 TRIM47Q96LD4 638 aa17.22■□□□□ 0.35
CCNE1-203ENST00000444983 ARHGAP39Q9C0H5 1083 aa17.22■□□□□ 0.35
CCNE1-203ENST00000444983 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.22■□□□□ 0.35
CCNE1-203ENST00000444983 POLR3EQ9NVU0 708 aa17.22■□□□□ 0.35
CCNE1-203ENST00000444983 DIS3Q9Y2L1 958 aaKnown RBP17.22■□□□□ 0.35
CCNE1-203ENST00000444983 PCDHB6Q9Y5E3 794 aa17.22■□□□□ 0.35
CCNE1-203ENST00000444983 LOC102724159A0A0B4J2E5 919 aa17.21■□□□□ 0.35
CCNE1-203ENST00000444983 LRRC37A2A6NM11 1700 aa17.21■□□□□ 0.35
CCNE1-203ENST00000444983 HOXC6P09630 235 aa17.21■□□□□ 0.35
CCNE1-203ENST00000444983 ALDH5A1P51649 535 aaPredicted RBP17.21■□□□□ 0.35
CCNE1-203ENST00000444983 MRPS9P82933 396 aaKnown RBP17.21■□□□□ 0.35
CCNE1-203ENST00000444983 NBR1Q14596 966 aa17.21■□□□□ 0.35
CCNE1-203ENST00000444983 PWP2Q15269 919 aaKnown RBP17.21■□□□□ 0.35
CCNE1-203ENST00000444983 FOXD4L6Q3SYB3 417 aaPredicted RBP17.21■□□□□ 0.35
CCNE1-203ENST00000444983 FOXD4L3Q6VB84 417 aaPredicted RBP17.21■□□□□ 0.35
CCNE1-203ENST00000444983 MORC4Q8TE76 937 aa17.21■□□□□ 0.35
CCNE1-203ENST00000444983 IWS1Q96ST2 819 aa17.21■□□□□ 0.35
CCNE1-203ENST00000444983 FTOQ9C0B1 505 aaKnown RBP eCLIP17.21■□□□□ 0.35
CCNE1-203ENST00000444983 EHMT1Q9H9B1 1298 aa17.21■□□□□ 0.35
CCNE1-203ENST00000444983 RTEL1Q9NZ71 1219 aa17.21■□□□□ 0.35
CCNE1-203ENST00000444983 ADD3Q9UEY8 706 aaKnown RBP17.21■□□□□ 0.35
CCNE1-203ENST00000444983 NOL7Q9UMY1 257 aaKnown RBP17.21■□□□□ 0.35
CCNE1-203ENST00000444983 NR3C2P08235 984 aa17.2■□□□□ 0.34
CCNE1-203ENST00000444983 EIF2AK2P19525 551 aaKnown RBP17.2■□□□□ 0.34
CCNE1-203ENST00000444983 PSMC4P43686 418 aa17.2■□□□□ 0.34
CCNE1-203ENST00000444983 NASPP49321 788 aaPredicted RBP17.2■□□□□ 0.34
CCNE1-203ENST00000444983 UBXN2AP68543 259 aa17.2■□□□□ 0.34
CCNE1-203ENST00000444983 PTPAQ15257 358 aa17.2■□□□□ 0.34
CCNE1-203ENST00000444983 TTC38Q5R3I4 469 aa17.2■□□□□ 0.34
CCNE1-203ENST00000444983 ARHGEF16Q5VV41 709 aa17.2■□□□□ 0.34
CCNE1-203ENST00000444983 XRRA1Q6P2D8 792 aa17.2■□□□□ 0.34
CCNE1-203ENST00000444983 JMYQ8N9B5 988 aa17.2■□□□□ 0.34
CCNE1-203ENST00000444983 ZNF396Q96N95 335 aaPredicted RBP17.2■□□□□ 0.34
CCNE1-203ENST00000444983 TFIP11Q9UBB9 837 aaKnown RBP17.2■□□□□ 0.34
CCNE1-203ENST00000444983 CLIC4Q9Y696 253 aa17.2■□□□□ 0.34
CCNE1-203ENST00000444983 IGLV3-22A0A075B6J6 115 aa17.2■□□□□ 0.34
CCNE1-203ENST00000444983 FAM86B1E9PN63 330 aa17.2■□□□□ 0.34
CCNE1-203ENST00000444983 TNPO2O14787 897 aaKnown RBP17.2■□□□□ 0.34
CCNE1-203ENST00000444983 IGHA2P01877 340 aa17.2■□□□□ 0.34
CCNE1-203ENST00000444983 FAM86B2P0C5J1 330 aa17.2■□□□□ 0.34
CCNE1-203ENST00000444983 FCGRTP55899 365 aa17.2■□□□□ 0.34
CCNE1-203ENST00000444983 ORC2Q13416 577 aaPredicted RBP17.2■□□□□ 0.34
CCNE1-203ENST00000444983 LETM2Q2VYF4 491 aa17.2■□□□□ 0.34
CCNE1-203ENST00000444983 ANO1Q5XXA6 986 aa17.2■□□□□ 0.34
CCNE1-203ENST00000444983 ZNF467Q7Z7K2 595 aaPredicted RBP17.2■□□□□ 0.34
CCNE1-203ENST00000444983 C4orf32Q8N8J7 132 aa17.2■□□□□ 0.34
CCNE1-203ENST00000444983 LENG9Q96B70 501 aa17.2■□□□□ 0.34
CCNE1-203ENST00000444983 CFAP45Q9UL16 551 aa17.2■□□□□ 0.34
CCNE1-203ENST00000444983 MORC2Q9Y6X9 1032 aaPredicted RBP17.2■□□□□ 0.34
CCNE1-203ENST00000444983 BAG4O95429 457 aaKnown RBP17.19■□□□□ 0.34
CCNE1-203ENST00000444983 TDP2O95551 362 aa17.19■□□□□ 0.34
CCNE1-203ENST00000444983 GCFC2P16383 781 aaKnown RBP17.19■□□□□ 0.34
CCNE1-203ENST00000444983 MAP2K5Q13163 448 aa17.19■□□□□ 0.34
CCNE1-203ENST00000444983 SF3A1Q15459 793 aaKnown RBP17.19■□□□□ 0.34
CCNE1-203ENST00000444983 MAMDC4Q6UXC1 1216 aa17.19■□□□□ 0.34
CCNE1-203ENST00000444983 CYP2W1Q8TAV3 490 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms