RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 A0A1W2PPC1 479 aa19.77■□□□□ 0.76
LIME1-202ENST00000444951 SMCO2A6NFE2 343 aa19.77■□□□□ 0.76
LIME1-202ENST00000444951 hCG_1984214I3L0E3 225 aa19.77■□□□□ 0.76
LIME1-202ENST00000444951 COBLO75128 1261 aa19.77■□□□□ 0.76
LIME1-202ENST00000444951 XBP1P17861 261 aa19.77■□□□□ 0.76
LIME1-202ENST00000444951 ADORA2AP29274 412 aa19.77■□□□□ 0.76
LIME1-202ENST00000444951 MAGEA10P43363 369 aaPredicted RBP19.77■□□□□ 0.76
LIME1-202ENST00000444951 NLRP5P59047 1200 aa19.77■□□□□ 0.76
LIME1-202ENST00000444951 TKFCQ3LXA3 575 aa19.77■□□□□ 0.76
LIME1-202ENST00000444951 ZNF713Q8N859 430 aaPredicted RBP19.77■□□□□ 0.76
LIME1-202ENST00000444951 C8orf76Q96K31 380 aa19.77■□□□□ 0.76
LIME1-202ENST00000444951 ACAD9Q9H845 621 aa19.77■□□□□ 0.76
LIME1-202ENST00000444951 SMCHD1A6NHR9 2005 aa19.76■□□□□ 0.75
LIME1-202ENST00000444951 CFBP00751 764 aa19.76■□□□□ 0.75
LIME1-202ENST00000444951 LARP1BQ659C4 914 aaKnown RBP19.76■□□□□ 0.75
LIME1-202ENST00000444951 CHST13Q8NET6 341 aa19.76■□□□□ 0.75
LIME1-202ENST00000444951 CCDC148Q8NFR7 591 aa19.76■□□□□ 0.75
LIME1-202ENST00000444951 CCDC12Q8WUD4 166 aaPredicted RBP19.76■□□□□ 0.75
LIME1-202ENST00000444951 CLEC4DQ8WXI8 215 aa19.76■□□□□ 0.75
LIME1-202ENST00000444951 TBC1D5Q92609 795 aa19.76■□□□□ 0.75
LIME1-202ENST00000444951 MROH8Q9H579 483 aa19.76■□□□□ 0.75
LIME1-202ENST00000444951 DDX20Q9UHI6 824 aaKnown RBP19.76■□□□□ 0.75
LIME1-202ENST00000444951 ZNFX1Q9P2E3 1918 aaKnown RBP19.75■□□□□ 0.75
LIME1-202ENST00000444951 CYBAP13498 195 aa19.75■□□□□ 0.75
LIME1-202ENST00000444951 CNGA1P29973 690 aa19.75■□□□□ 0.75
LIME1-202ENST00000444951 HOXA13P31271 388 aaPredicted RBP19.75■□□□□ 0.75
LIME1-202ENST00000444951 BMP8BP34820 402 aa19.75■□□□□ 0.75
LIME1-202ENST00000444951 COPB2P35606 906 aa19.75■□□□□ 0.75
LIME1-202ENST00000444951 ADCY7P51828 1080 aa19.75■□□□□ 0.75
LIME1-202ENST00000444951 KRT40Q6A162 431 aa19.75■□□□□ 0.75
LIME1-202ENST00000444951 PPP1R18Q6NYC8 613 aa19.75■□□□□ 0.75
LIME1-202ENST00000444951 ANKRD35Q8N283 1001 aa19.75■□□□□ 0.75
LIME1-202ENST00000444951 SHCBP1Q8NEM2 672 aa19.75■□□□□ 0.75
LIME1-202ENST00000444951 PSTPIP2Q9H939 334 aa19.75■□□□□ 0.75
LIME1-202ENST00000444951 C6orf50Q9HD87 102 aa19.75■□□□□ 0.75
LIME1-202ENST00000444951 SH3GLB2Q9NR46 395 aa19.75■□□□□ 0.75
LIME1-202ENST00000444951 FBXO40Q9UH90 709 aa19.75■□□□□ 0.75
LIME1-202ENST00000444951 H3BQV1 296 aa19.74■□□□□ 0.75
LIME1-202ENST00000444951 OPLAHO14841 1288 aa19.74■□□□□ 0.75
LIME1-202ENST00000444951 CALML3P27482 149 aa19.74■□□□□ 0.75
LIME1-202ENST00000444951 UBE2SQ16763 222 aa19.74■□□□□ 0.75
LIME1-202ENST00000444951 ANO1Q5XXA6 986 aa19.74■□□□□ 0.75
LIME1-202ENST00000444951 DPP9Q86TI2 863 aa19.74■□□□□ 0.75
LIME1-202ENST00000444951 MCF2L2Q86YR7 1114 aa19.74■□□□□ 0.75
LIME1-202ENST00000444951 CUL5Q93034 780 aa19.74■□□□□ 0.75
LIME1-202ENST00000444951 MMP19Q99542 508 aa19.74■□□□□ 0.75
LIME1-202ENST00000444951 LAMA2P24043 3122 aaKnown RBP19.74■□□□□ 0.75
LIME1-202ENST00000444951 VPS37CA5D8V6 355 aaPredicted RBP19.73■□□□□ 0.75
LIME1-202ENST00000444951 ADAMTS3O15072 1205 aa19.73■□□□□ 0.75
LIME1-202ENST00000444951 FCER1AP12319 257 aa19.73■□□□□ 0.75
LIME1-202ENST00000444951 BAATQ14032 418 aaPredicted RBP19.73■□□□□ 0.75
LIME1-202ENST00000444951 KCTD2Q14681 263 aa19.73■□□□□ 0.75
LIME1-202ENST00000444951 OLFML2BQ68BL8 750 aa19.73■□□□□ 0.75
LIME1-202ENST00000444951 USP17L6PQ6QN14 398 aa19.73■□□□□ 0.75
LIME1-202ENST00000444951 SLC30A10Q6XR72 485 aa19.73■□□□□ 0.75
LIME1-202ENST00000444951 RNF207Q6ZRF8 634 aa19.73■□□□□ 0.75
LIME1-202ENST00000444951 PHF20Q9BVI0 1012 aa19.73■□□□□ 0.75
LIME1-202ENST00000444951 SENP6Q9GZR1 1112 aaPredicted RBP19.73■□□□□ 0.75
LIME1-202ENST00000444951 RIC8AQ9NPQ8 531 aa19.73■□□□□ 0.75
LIME1-202ENST00000444951 GCOM1H8Y6P7 765 aaPredicted RBP19.72■□□□□ 0.75
LIME1-202ENST00000444951 PGK2P07205 417 aa19.72■□□□□ 0.75
LIME1-202ENST00000444951 POLR2MP0CAP2 368 aa19.72■□□□□ 0.75
LIME1-202ENST00000444951 MRPL12P52815 198 aaKnown RBP19.72■□□□□ 0.75
LIME1-202ENST00000444951 PRAMEF19Q5SWL8 479 aa19.72■□□□□ 0.75
LIME1-202ENST00000444951 FCHSD1Q86WN1 690 aa19.72■□□□□ 0.75
LIME1-202ENST00000444951 RASGRP4Q8TDF6 673 aa19.72■□□□□ 0.75
LIME1-202ENST00000444951 IPO9Q96P70 1041 aaKnown RBP19.72■□□□□ 0.75
LIME1-202ENST00000444951 ZMYND12Q9H0C1 365 aa19.72■□□□□ 0.75
LIME1-202ENST00000444951 A1CFQ9NQ94 594 aaKnown RBP19.72■□□□□ 0.75
LIME1-202ENST00000444951 TMEM260Q9NX78 707 aa19.72■□□□□ 0.75
LIME1-202ENST00000444951 STRNO43815 780 aa19.71■□□□□ 0.75
LIME1-202ENST00000444951 PDCP20941 246 aa19.71■□□□□ 0.75
LIME1-202ENST00000444951 SYT1P21579 422 aa19.71■□□□□ 0.75
LIME1-202ENST00000444951 GNA11P29992 359 aa19.71■□□□□ 0.75
LIME1-202ENST00000444951 ATN1P54259 1190 aaPredicted RBP19.71■□□□□ 0.75
LIME1-202ENST00000444951 JAKMIP3Q5VZ66 844 aa19.71■□□□□ 0.75
LIME1-202ENST00000444951 MCTP1Q6DN14 999 aa19.71■□□□□ 0.75
LIME1-202ENST00000444951 FBXO18Q8NFZ0 1043 aa19.71■□□□□ 0.75
LIME1-202ENST00000444951 OXER1Q8TDS5 423 aa19.71■□□□□ 0.75
LIME1-202ENST00000444951 PURBQ96QR8 312 aaKnown RBP19.71■□□□□ 0.75
LIME1-202ENST00000444951 CYP39A1Q9NYL5 469 aa19.71■□□□□ 0.75
LIME1-202ENST00000444951 PCDHA4Q9UN74 947 aa19.71■□□□□ 0.75
LIME1-202ENST00000444951 ESYT2A0FGR8 921 aa19.7■□□□□ 0.74
LIME1-202ENST00000444951 MMP1P03956 469 aa19.7■□□□□ 0.74
LIME1-202ENST00000444951 KRT2P35908 639 aa19.7■□□□□ 0.74
LIME1-202ENST00000444951 RPS6P62753 249 aaKnown RBP19.7■□□□□ 0.74
LIME1-202ENST00000444951 GNL2Q13823 731 aaKnown RBP19.7■□□□□ 0.74
LIME1-202ENST00000444951 SAFBQ15424 915 aaKnown RBP eCLIP19.7■□□□□ 0.74
LIME1-202ENST00000444951 GJC2Q5T442 439 aaPredicted RBP19.7■□□□□ 0.74
LIME1-202ENST00000444951 FOXD4L5Q5VV16 416 aaPredicted RBP19.7■□□□□ 0.74
LIME1-202ENST00000444951 BLIDQ8IZY5 108 aa19.7■□□□□ 0.74
LIME1-202ENST00000444951 BICD2Q8TD16 824 aa19.7■□□□□ 0.74
LIME1-202ENST00000444951 FOXD4L4Q8WXT5 416 aaPredicted RBP19.7■□□□□ 0.74
LIME1-202ENST00000444951 PGBD1Q96JS3 809 aa19.7■□□□□ 0.74
LIME1-202ENST00000444951 BRMS1Q9HCU9 246 aa19.7■□□□□ 0.74
LIME1-202ENST00000444951 PLXNA1Q9UIW2 1896 aa19.69■□□□□ 0.74
LIME1-202ENST00000444951 POTEB2H3BUK9 544 aa19.69■□□□□ 0.74
LIME1-202ENST00000444951 DNM1LO00429 736 aa19.69■□□□□ 0.74
LIME1-202ENST00000444951 MEIS2O14770 477 aa19.69■□□□□ 0.74
LIME1-202ENST00000444951 MSCO60682 206 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms