RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 SELENOSQ9BQE4 189 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 ZNF287Q9HBT7 754 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 CAPN11Q9UMQ6 739 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 MAP2K7O14733 419 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 SEMA3EO15041 775 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 KRT13P13646 458 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 CYP4A11Q02928 519 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 PDXDC2PQ6P474 469 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 CCDC25Q86WR0 208 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 MSANTD4Q8NCY6 345 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 ARPP21Q9UBL0 812 aaPredicted RBP12.87□□□□□ -0.35
HCFC1-203ENST00000444191 FAM184BQ9ULE4 1060 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 PCDHB13Q9Y5F0 798 aa12.87□□□□□ -0.35
HCFC1-203ENST00000444191 ICE2Q659A1 982 aa12.86□□□□□ -0.35
HCFC1-203ENST00000444191 OSBPL9Q96SU4 736 aa12.86□□□□□ -0.35
HCFC1-203ENST00000444191 REXO2Q9Y3B8 237 aaKnown RBP12.86□□□□□ -0.35
HCFC1-203ENST00000444191 NFAT5O94916 1531 aa12.86□□□□□ -0.35
HCFC1-203ENST00000444191 CHMP2AO43633 222 aa12.86□□□□□ -0.35
HCFC1-203ENST00000444191 FGFR2P21802 821 aa12.86□□□□□ -0.35
HCFC1-203ENST00000444191 CCNI2Q6ZMN8 369 aaPredicted RBP12.86□□□□□ -0.35
HCFC1-203ENST00000444191 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.86□□□□□ -0.35
HCFC1-203ENST00000444191 CPLX4Q7Z7G2 160 aa12.86□□□□□ -0.35
HCFC1-203ENST00000444191 CCDC84Q86UT8 332 aaPredicted RBP12.86□□□□□ -0.35
HCFC1-203ENST00000444191 TMEM47Q9BQJ4 181 aa12.86□□□□□ -0.35
HCFC1-203ENST00000444191 TDP2O95551 362 aa12.86□□□□□ -0.35
HCFC1-203ENST00000444191 MAGEA9P43362 315 aa12.86□□□□□ -0.35
HCFC1-203ENST00000444191 TRAPPC10P48553 1259 aa12.86□□□□□ -0.35
HCFC1-203ENST00000444191 RIC1Q4ADV7 1423 aa12.86□□□□□ -0.35
HCFC1-203ENST00000444191 KRT25Q7Z3Z0 450 aa12.86□□□□□ -0.35
HCFC1-203ENST00000444191 LARP4BQ92615 738 aaKnown RBP12.86□□□□□ -0.35
HCFC1-203ENST00000444191 RPGRQ92834 1020 aaKnown RBP12.86□□□□□ -0.35
HCFC1-203ENST00000444191 ARL8AQ96BM9 186 aa12.86□□□□□ -0.35
HCFC1-203ENST00000444191 SHISA4Q96DD7 197 aa12.86□□□□□ -0.35
HCFC1-203ENST00000444191 DHTKD1Q96HY7 919 aaPredicted RBP12.86□□□□□ -0.35
HCFC1-203ENST00000444191 TRIM9Q9C026 710 aa12.86□□□□□ -0.35
HCFC1-203ENST00000444191 THAP9Q9H5L6 903 aa12.86□□□□□ -0.35
HCFC1-203ENST00000444191 BCS1LQ9Y276 419 aa12.86□□□□□ -0.35
HCFC1-203ENST00000444191 PNPLA7Q6ZV29 1317 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 FAM237AA0A1B0GTK4 181 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 PALMO75781 387 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 TCP1P17987 556 aaKnown RBP12.85□□□□□ -0.35
HCFC1-203ENST00000444191 UBE4AQ14139 1066 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 TBC1D10BQ4KMP7 808 aaPredicted RBP12.85□□□□□ -0.35
HCFC1-203ENST00000444191 TPTE2Q6XPS3 522 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 TRAPPC11Q7Z392 1133 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 TXNRD3Q86VQ6 643 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 TEX2Q8IWB9 1127 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 DYDC1Q8WWB3 177 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 RBM12Q9NTZ6 932 aaKnown RBP12.85□□□□□ -0.35
HCFC1-203ENST00000444191 PKD2L1Q9P0L9 805 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 PCDHA6Q9UN73 950 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 KIAA1024Q9UPX6 916 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 PCDHA8Q9Y5H6 950 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 SEC24CP53992 1094 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 SNAP25P60880 206 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 TCP10Q12799 353 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 USH1GQ495M9 461 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 VWA3BQ502W6 1294 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 MUM1L1Q5H9M0 696 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 MYOCDQ8IZQ8 938 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 OR2W6PQ8NHA6 318 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 STIM2Q9P246 746 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 LDHCP07864 332 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 CARSP49589 748 aaKnown RBP12.85□□□□□ -0.35
HCFC1-203ENST00000444191 MKRN4PQ13434 485 aaPredicted RBP12.85□□□□□ -0.35
HCFC1-203ENST00000444191 RPS6KA1Q15418 735 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 HNRNPLLQ8WVV9 542 aaKnown RBP12.85□□□□□ -0.35
HCFC1-203ENST00000444191 NSUN4Q96CB9 384 aaKnown RBP12.85□□□□□ -0.35
HCFC1-203ENST00000444191 RPGRIP1Q96KN7 1286 aa12.85□□□□□ -0.35
HCFC1-203ENST00000444191 BUB1BO60566 1050 aaPredicted RBP12.84□□□□□ -0.35
HCFC1-203ENST00000444191 UFL1O94874 794 aa12.84□□□□□ -0.35
HCFC1-203ENST00000444191 CTNNA1P35221 906 aaKnown RBP12.84□□□□□ -0.35
HCFC1-203ENST00000444191 ASIC2Q16515 512 aa12.84□□□□□ -0.35
HCFC1-203ENST00000444191 APTXQ7Z2E3 356 aaKnown RBP12.84□□□□□ -0.35
HCFC1-203ENST00000444191 DAAM2Q86T65 1068 aa12.84□□□□□ -0.35
HCFC1-203ENST00000444191 DDX42Q86XP3 938 aaKnown RBP eCLIP12.84□□□□□ -0.35
HCFC1-203ENST00000444191 ZNF34Q8IZ26 560 aa12.84□□□□□ -0.35
HCFC1-203ENST00000444191 DDX12PQ92771 950 aa12.84□□□□□ -0.35
HCFC1-203ENST00000444191 RIOK1Q9BRS2 568 aaKnown RBP12.84□□□□□ -0.35
HCFC1-203ENST00000444191 ATP8A2Q9NTI2 1148 aa12.84□□□□□ -0.35
HCFC1-203ENST00000444191 ZNF804BA4D1E1 1349 aa12.84□□□□□ -0.35
HCFC1-203ENST00000444191 ERVV-1B6SEH8 477 aa12.84□□□□□ -0.35
HCFC1-203ENST00000444191 IRAK1P51617 712 aa12.84□□□□□ -0.35
HCFC1-203ENST00000444191 WDR59Q6PJI9 974 aa12.84□□□□□ -0.35
HCFC1-203ENST00000444191 CCDC121Q6ZUS5 278 aa12.84□□□□□ -0.35
HCFC1-203ENST00000444191 TICAM2Q86XR7 235 aa12.84□□□□□ -0.35
HCFC1-203ENST00000444191 GIMAP7Q8NHV1 300 aa12.84□□□□□ -0.35
HCFC1-203ENST00000444191 RAB21Q9UL25 225 aa12.84□□□□□ -0.35
HCFC1-203ENST00000444191 SNX12Q9UMY4 172 aa12.84□□□□□ -0.35
HCFC1-203ENST00000444191 PCDHA12Q9UN75 941 aa12.84□□□□□ -0.35
HCFC1-203ENST00000444191 OVOS2A0A0G2JMS6 1433 aa12.84□□□□□ -0.35
HCFC1-203ENST00000444191 NPHP3-ACAD11A0A0J9YXS1 232 aa12.83□□□□□ -0.35
HCFC1-203ENST00000444191 USP17L5A8MUK1 530 aa12.83□□□□□ -0.35
HCFC1-203ENST00000444191 EPHB6O15197 1021 aa12.83□□□□□ -0.35
HCFC1-203ENST00000444191 RFC4P35249 363 aa12.83□□□□□ -0.35
HCFC1-203ENST00000444191 TNNC1P63316 161 aa12.83□□□□□ -0.35
HCFC1-203ENST00000444191 PAK2Q13177 524 aa12.83□□□□□ -0.35
HCFC1-203ENST00000444191 KRT71Q3SY84 523 aa12.83□□□□□ -0.35
HCFC1-203ENST00000444191 FAM26FQ5R3K3 315 aa12.83□□□□□ -0.35
HCFC1-203ENST00000444191 ARL6IP4Q66PJ3 421 aaKnown RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms