RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 PPP1R18Q6NYC8 613 aa18.44■□□□□ 0.54
USP39-205ENST00000442708 IL31RAQ8NI17 732 aa18.44■□□□□ 0.54
USP39-205ENST00000442708 RMDN3Q96TC7 470 aa18.44■□□□□ 0.54
USP39-205ENST00000442708 HMX1Q9NP08 348 aaPredicted RBP18.44■□□□□ 0.54
USP39-205ENST00000442708 RIC8AQ9NPQ8 531 aa18.44■□□□□ 0.54
USP39-205ENST00000442708 PXMP2Q9NR77 195 aa18.44■□□□□ 0.54
USP39-205ENST00000442708 SH2B1Q9NRF2 756 aaPredicted RBP18.44■□□□□ 0.54
USP39-205ENST00000442708 ADD3Q9UEY8 706 aaKnown RBP18.44■□□□□ 0.54
USP39-205ENST00000442708 STK36Q9NRP7 1315 aa18.44■□□□□ 0.54
USP39-205ENST00000442708 POTEFA5A3E0 1075 aa18.43■□□□□ 0.54
USP39-205ENST00000442708 SMCO2A6NFE2 343 aa18.43■□□□□ 0.54
USP39-205ENST00000442708 DEXIO95424 95 aa18.43■□□□□ 0.54
USP39-205ENST00000442708 ADCY7P51828 1080 aa18.43■□□□□ 0.54
USP39-205ENST00000442708 EEPD1Q7L9B9 569 aa18.43■□□□□ 0.54
USP39-205ENST00000442708 NSUN6Q8TEA1 469 aaKnown RBP18.43■□□□□ 0.54
USP39-205ENST00000442708 TMX3Q96JJ7 454 aa18.43■□□□□ 0.54
USP39-205ENST00000442708 GJB4Q9NTQ9 266 aa18.43■□□□□ 0.54
USP39-205ENST00000442708 ORC3Q9UBD5 711 aaPredicted RBP18.43■□□□□ 0.54
USP39-205ENST00000442708 KIAA0100Q14667 2235 aaKnown RBP18.43■□□□□ 0.54
USP39-205ENST00000442708 KIAA1217Q5T5P2 1943 aa18.43■□□□□ 0.54
USP39-205ENST00000442708 ADCY6O43306 1168 aa18.42■□□□□ 0.54
USP39-205ENST00000442708 ACVR2BQ13705 512 aa18.42■□□□□ 0.54
USP39-205ENST00000442708 ARHGEF16Q5VV41 709 aa18.42■□□□□ 0.54
USP39-205ENST00000442708 LHX8Q68G74 356 aa18.42■□□□□ 0.54
USP39-205ENST00000442708 FBXO16Q8IX29 292 aaPredicted RBP18.42■□□□□ 0.54
USP39-205ENST00000442708 IL27Q8NEV9 243 aa18.42■□□□□ 0.54
USP39-205ENST00000442708 SMARCC2Q8TAQ2 1214 aa18.42■□□□□ 0.54
USP39-205ENST00000442708 ZMYND12Q9H0C1 365 aa18.42■□□□□ 0.54
USP39-205ENST00000442708 PDGFCQ9NRA1 345 aa18.42■□□□□ 0.54
USP39-205ENST00000442708 TMEM260Q9NX78 707 aa18.42■□□□□ 0.54
USP39-205ENST00000442708 ZHX1Q9UKY1 873 aaPredicted RBP18.42■□□□□ 0.54
USP39-205ENST00000442708 CNPY2Q9Y2B0 182 aa18.42■□□□□ 0.54
USP39-205ENST00000442708 FRMPD4Q14CM0 1322 aa18.42■□□□□ 0.54
USP39-205ENST00000442708 BRCA2P51587 3418 aa18.41■□□□□ 0.54
USP39-205ENST00000442708 LOC102724159A0A0B4J2E5 919 aa18.41■□□□□ 0.54
USP39-205ENST00000442708 ESYT2A0FGR8 921 aa18.41■□□□□ 0.54
USP39-205ENST00000442708 GJB1P08034 283 aa18.41■□□□□ 0.54
USP39-205ENST00000442708 CNGA1P29973 690 aa18.41■□□□□ 0.54
USP39-205ENST00000442708 CLK2P49760 499 aaKnown RBP18.41■□□□□ 0.54
USP39-205ENST00000442708 SOX10P56693 466 aa18.41■□□□□ 0.54
USP39-205ENST00000442708 PGM5Q15124 567 aa18.41■□□□□ 0.54
USP39-205ENST00000442708 PWP2Q15269 919 aaKnown RBP18.41■□□□□ 0.54
USP39-205ENST00000442708 NPY5RQ15761 445 aa18.41■□□□□ 0.54
USP39-205ENST00000442708 TMEM63BQ5T3F8 832 aa18.41■□□□□ 0.54
USP39-205ENST00000442708 ANO1Q5XXA6 986 aa18.41■□□□□ 0.54
USP39-205ENST00000442708 TAPT1Q6NXT6 567 aa18.41■□□□□ 0.54
USP39-205ENST00000442708 CUL5Q93034 780 aa18.41■□□□□ 0.54
USP39-205ENST00000442708 LENG1Q96BZ8 264 aaPredicted RBP18.41■□□□□ 0.54
USP39-205ENST00000442708 ZFP91Q96JP5 570 aaPredicted RBP18.41■□□□□ 0.54
USP39-205ENST00000442708 DEFB118Q96PH6 123 aa18.41■□□□□ 0.54
USP39-205ENST00000442708 PDCD2LQ9BRP1 358 aa18.41■□□□□ 0.54
USP39-205ENST00000442708 ABHD16BQ9H3Z7 469 aa18.41■□□□□ 0.54
USP39-205ENST00000442708 SH3GLB2Q9NR46 395 aa18.41■□□□□ 0.54
USP39-205ENST00000442708 NRBP1Q9UHY1 535 aa18.41■□□□□ 0.54
USP39-205ENST00000442708 NR3C2P08235 984 aa18.4■□□□□ 0.54
USP39-205ENST00000442708 PTGS1P23219 599 aa18.4■□□□□ 0.54
USP39-205ENST00000442708 MRPL12P52815 198 aaKnown RBP18.4■□□□□ 0.54
USP39-205ENST00000442708 PDE4DQ08499 809 aa18.4■□□□□ 0.54
USP39-205ENST00000442708 PGBD1Q96JS3 809 aa18.4■□□□□ 0.54
USP39-205ENST00000442708 IWS1Q96ST2 819 aa18.4■□□□□ 0.54
USP39-205ENST00000442708 KCNJ14Q9UNX9 436 aa18.4■□□□□ 0.54
USP39-205ENST00000442708 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.39■□□□□ 0.53
USP39-205ENST00000442708 SEPT4O43236 478 aa18.39■□□□□ 0.53
USP39-205ENST00000442708 EN2P19622 333 aaPredicted RBP18.39■□□□□ 0.53
USP39-205ENST00000442708 MCM2P49736 904 aa18.39■□□□□ 0.53
USP39-205ENST00000442708 CCDC144BQ3MJ40 725 aa18.39■□□□□ 0.53
USP39-205ENST00000442708 LLPHQ9BRT6 129 aaKnown RBP18.39■□□□□ 0.53
USP39-205ENST00000442708 ALG1Q9BT22 464 aa18.39■□□□□ 0.53
USP39-205ENST00000442708 TMEM106CQ9BVX2 250 aa18.39■□□□□ 0.53
USP39-205ENST00000442708 DDX20Q9UHI6 824 aaKnown RBP18.39■□□□□ 0.53
USP39-205ENST00000442708 PCDHA6Q9UN73 950 aa18.39■□□□□ 0.53
USP39-205ENST00000442708 PCDHA8Q9Y5H6 950 aa18.39■□□□□ 0.53
USP39-205ENST00000442708 MYH7BA7E2Y1 1941 aa18.39■□□□□ 0.53
USP39-205ENST00000442708 RGS20O76081 388 aa18.38■□□□□ 0.53
USP39-205ENST00000442708 SGPL1O95470 568 aa18.38■□□□□ 0.53
USP39-205ENST00000442708 MYCLP12524 364 aaPredicted RBP18.38■□□□□ 0.53
USP39-205ENST00000442708 ADCYAP1R1P41586 468 aa18.38■□□□□ 0.53
USP39-205ENST00000442708 GJA8P48165 433 aa18.38■□□□□ 0.53
USP39-205ENST00000442708 FOSBP53539 338 aa18.38■□□□□ 0.53
USP39-205ENST00000442708 NLRP5P59047 1200 aa18.38■□□□□ 0.53
USP39-205ENST00000442708 MRPS9P82933 396 aaKnown RBP18.38■□□□□ 0.53
USP39-205ENST00000442708 JAKMIP3Q5VZ66 844 aa18.38■□□□□ 0.53
USP39-205ENST00000442708 VSIG10LQ86VR7 867 aa18.38■□□□□ 0.53
USP39-205ENST00000442708 RASGRP4Q8TDF6 673 aa18.38■□□□□ 0.53
USP39-205ENST00000442708 U2AF1L4Q8WU68 220 aaKnown RBP18.38■□□□□ 0.53
USP39-205ENST00000442708 CCDC12Q8WUD4 166 aaPredicted RBP18.38■□□□□ 0.53
USP39-205ENST00000442708 PHF20Q9BVI0 1012 aa18.38■□□□□ 0.53
USP39-205ENST00000442708 CRISPLD2Q9H0B8 497 aa18.38■□□□□ 0.53
USP39-205ENST00000442708 C6orf50Q9HD87 102 aa18.38■□□□□ 0.53
USP39-205ENST00000442708 VTA1Q9NP79 307 aa18.38■□□□□ 0.53
USP39-205ENST00000442708 RBM47A0AV96 593 aaKnown RBP18.37■□□□□ 0.53
USP39-205ENST00000442708 M0R2N6 131 aa18.37■□□□□ 0.53
USP39-205ENST00000442708 STXBP2Q15833 593 aa18.37■□□□□ 0.53
USP39-205ENST00000442708 GJC2Q5T442 439 aaPredicted RBP18.37■□□□□ 0.53
USP39-205ENST00000442708 CCDC148Q8NFR7 591 aa18.37■□□□□ 0.53
USP39-205ENST00000442708 ANO3Q9BYT9 981 aa18.37■□□□□ 0.53
USP39-205ENST00000442708 FAM184BQ9ULE4 1060 aa18.37■□□□□ 0.53
USP39-205ENST00000442708 B4DLN1 442 aa18.36■□□□□ 0.53
USP39-205ENST00000442708 ARIH2O95376 493 aa18.36■□□□□ 0.53
USP39-205ENST00000442708 AKR1A1P14550 325 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms