RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 CCDC155Q8N6L0 562 aa16.56■□□□□ 0.24
LINC00642-202ENST00000442515 NEDD1Q8NHV4 660 aa16.56■□□□□ 0.24
LINC00642-202ENST00000442515 COPS5Q92905 334 aa16.56■□□□□ 0.24
LINC00642-202ENST00000442515 CTAGE1Q96RT6 745 aa16.56■□□□□ 0.24
LINC00642-202ENST00000442515 PRR12Q9ULL5 1215 aa16.56■□□□□ 0.24
LINC00642-202ENST00000442515 TET1Q8NFU7 2136 aa16.55■□□□□ 0.24
LINC00642-202ENST00000442515 KPNA6O60684 536 aa16.55■□□□□ 0.24
LINC00642-202ENST00000442515 NBNO60934 754 aa16.55■□□□□ 0.24
LINC00642-202ENST00000442515 CXCL10P02778 98 aa16.55■□□□□ 0.24
LINC00642-202ENST00000442515 SELPP16109 830 aa16.55■□□□□ 0.24
LINC00642-202ENST00000442515 CHMP4BP1P59074 171 aa16.55■□□□□ 0.24
LINC00642-202ENST00000442515 C17orf80Q9BSJ5 609 aa16.55■□□□□ 0.24
LINC00642-202ENST00000442515 MYO15AQ9UKN7 3530 aa16.54■□□□□ 0.24
LINC00642-202ENST00000442515 LOC102724159A0A0B4J2E5 919 aa16.54■□□□□ 0.24
LINC00642-202ENST00000442515 RBAK-RBAKDNI3L0D1 243 aa16.54■□□□□ 0.24
LINC00642-202ENST00000442515 NFIBO00712 420 aa16.54■□□□□ 0.24
LINC00642-202ENST00000442515 NKRFO15226 690 aaKnown RBP eCLIP16.54■□□□□ 0.24
LINC00642-202ENST00000442515 ICAM1P05362 532 aa16.54■□□□□ 0.24
LINC00642-202ENST00000442515 PWP2Q15269 919 aaKnown RBP16.54■□□□□ 0.24
LINC00642-202ENST00000442515 GDF6Q6KF10 455 aaPredicted RBP16.54■□□□□ 0.24
LINC00642-202ENST00000442515 FAM117BQ6P1L5 589 aa16.54■□□□□ 0.24
LINC00642-202ENST00000442515 FBXO22Q8NEZ5 403 aa16.54■□□□□ 0.24
LINC00642-202ENST00000442515 DHX38Q92620 1227 aaKnown RBP16.54■□□□□ 0.24
LINC00642-202ENST00000442515 OSBP2Q969R2 916 aa16.54■□□□□ 0.24
LINC00642-202ENST00000442515 MRPL38Q96DV4 380 aaKnown RBP16.54■□□□□ 0.24
LINC00642-202ENST00000442515 CRBNQ96SW2 442 aa16.54■□□□□ 0.24
LINC00642-202ENST00000442515 PHOX2BQ99453 314 aa16.54■□□□□ 0.24
LINC00642-202ENST00000442515 PTPRSQ13332 1948 aa16.54■□□□□ 0.24
LINC00642-202ENST00000442515 ABHD14A-ACY1A0A1B0GW23 586 aa16.53■□□□□ 0.24
LINC00642-202ENST00000442515 PTPDC1A2A3K4 754 aa16.53■□□□□ 0.24
LINC00642-202ENST00000442515 GPAA1O43292 621 aa16.53■□□□□ 0.24
LINC00642-202ENST00000442515 TFAP4Q01664 338 aa16.53■□□□□ 0.24
LINC00642-202ENST00000442515 SLC30A10Q6XR72 485 aa16.53■□□□□ 0.24
LINC00642-202ENST00000442515 SCFD2Q8WU76 684 aa16.53■□□□□ 0.24
LINC00642-202ENST00000442515 LCTP09848 1927 aa16.53■□□□□ 0.24
LINC00642-202ENST00000442515 MYH4Q9Y623 1939 aa16.53■□□□□ 0.24
LINC00642-202ENST00000442515 C19orf67A6NJJ6 358 aa16.52■□□□□ 0.24
LINC00642-202ENST00000442515 EFCAB14O75071 495 aa16.52■□□□□ 0.24
LINC00642-202ENST00000442515 RAB11FIP3O75154 756 aa16.52■□□□□ 0.24
LINC00642-202ENST00000442515 PARNO95453 639 aaKnown RBP16.52■□□□□ 0.24
LINC00642-202ENST00000442515 PDE4DQ08499 809 aa16.52■□□□□ 0.24
LINC00642-202ENST00000442515 RBL2Q08999 1139 aa16.52■□□□□ 0.24
LINC00642-202ENST00000442515 TIGD5Q53EQ6 642 aa16.52■□□□□ 0.24
LINC00642-202ENST00000442515 RCSD1Q6JBY9 416 aa16.52■□□□□ 0.24
LINC00642-202ENST00000442515 SESTD1Q86VW0 696 aa16.52■□□□□ 0.24
LINC00642-202ENST00000442515 APPBP2Q92624 585 aa16.52■□□□□ 0.24
LINC00642-202ENST00000442515 RANBP17Q9H2T7 1088 aaKnown RBP16.52■□□□□ 0.24
LINC00642-202ENST00000442515 PRKAG3Q9UGI9 489 aa16.52■□□□□ 0.24
LINC00642-202ENST00000442515 STX8Q9UNK0 236 aa16.52■□□□□ 0.24
LINC00642-202ENST00000442515 ZNF318Q5VUA4 2279 aa16.52■□□□□ 0.23
LINC00642-202ENST00000442515 HMMRO75330 724 aa16.51■□□□□ 0.23
LINC00642-202ENST00000442515 ARIH2O95376 493 aa16.51■□□□□ 0.23
LINC00642-202ENST00000442515 APPP05067 770 aa16.51■□□□□ 0.23
LINC00642-202ENST00000442515 CKBP12277 381 aa16.51■□□□□ 0.23
LINC00642-202ENST00000442515 EDNRBP24530 442 aa16.51■□□□□ 0.23
LINC00642-202ENST00000442515 CALML3P27482 149 aa16.51■□□□□ 0.23
LINC00642-202ENST00000442515 PDE4BQ07343 736 aa16.51■□□□□ 0.23
LINC00642-202ENST00000442515 PTPROQ16827 1216 aa16.51■□□□□ 0.23
LINC00642-202ENST00000442515 ADHFE1Q8IWW8 467 aa16.51■□□□□ 0.23
LINC00642-202ENST00000442515 SIRT2Q8IXJ6 389 aa16.51■□□□□ 0.23
LINC00642-202ENST00000442515 PANK1Q8TE04 598 aa16.51■□□□□ 0.23
LINC00642-202ENST00000442515 PABPC5Q96DU9 382 aaKnown RBP16.51■□□□□ 0.23
LINC00642-202ENST00000442515 MFSD14AQ96MC6 490 aa16.51■□□□□ 0.23
LINC00642-202ENST00000442515 CTNNA3Q9UI47 895 aa16.51■□□□□ 0.23
LINC00642-202ENST00000442515 MTMR7Q9Y216 660 aa16.51■□□□□ 0.23
LINC00642-202ENST00000442515 FAM50BQ9Y247 325 aa16.51■□□□□ 0.23
LINC00642-202ENST00000442515 TXNP10599 105 aaKnown RBP16.5■□□□□ 0.23
LINC00642-202ENST00000442515 GNAT2P19087 354 aa16.5■□□□□ 0.23
LINC00642-202ENST00000442515 IKBKEQ14164 716 aa16.5■□□□□ 0.23
LINC00642-202ENST00000442515 COL19A1Q14993 1142 aa16.5■□□□□ 0.23
LINC00642-202ENST00000442515 TCEAL5Q5H9L2 206 aa16.5■□□□□ 0.23
LINC00642-202ENST00000442515 EP400NLQ6ZTU2 488 aa16.5■□□□□ 0.23
LINC00642-202ENST00000442515 BANK1Q8NDB2 785 aa16.5■□□□□ 0.23
LINC00642-202ENST00000442515 INSL6Q9Y581 213 aa16.5■□□□□ 0.23
LINC00642-202ENST00000442515 M0R2C6 588 aa16.49■□□□□ 0.23
LINC00642-202ENST00000442515 IRS1P35568 1242 aa16.49■□□□□ 0.23
LINC00642-202ENST00000442515 CCDC96Q2M329 555 aa16.49■□□□□ 0.23
LINC00642-202ENST00000442515 EPC2Q52LR7 807 aa16.49■□□□□ 0.23
LINC00642-202ENST00000442515 PPP4R3BQ5MIZ7 849 aa16.49■□□□□ 0.23
LINC00642-202ENST00000442515 TRAF7Q6Q0C0 670 aa16.49■□□□□ 0.23
LINC00642-202ENST00000442515 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.49■□□□□ 0.23
LINC00642-202ENST00000442515 KBTBD3Q8NAB2 608 aa16.49■□□□□ 0.23
LINC00642-202ENST00000442515 PRSS33Q8NF86 280 aa16.49■□□□□ 0.23
LINC00642-202ENST00000442515 AFG1LQ8WV93 481 aa16.49■□□□□ 0.23
LINC00642-202ENST00000442515 CLEC4DQ8WXI8 215 aa16.49■□□□□ 0.23
LINC00642-202ENST00000442515 KAT2BQ92831 832 aa16.49■□□□□ 0.23
LINC00642-202ENST00000442515 GTF2IRD1Q9UHL9 959 aa16.49■□□□□ 0.23
LINC00642-202ENST00000442515 MUTYHQ9UIF7 546 aa16.49■□□□□ 0.23
LINC00642-202ENST00000442515 SIP14410 1827 aa16.48■□□□□ 0.23
LINC00642-202ENST00000442515 ST18O60284 1047 aa16.48■□□□□ 0.23
LINC00642-202ENST00000442515 NMT2O60551 498 aa16.48■□□□□ 0.23
LINC00642-202ENST00000442515 MMP3P08254 477 aa16.48■□□□□ 0.23
LINC00642-202ENST00000442515 SLC16A2P36021 539 aa16.48■□□□□ 0.23
LINC00642-202ENST00000442515 RPS6P62753 249 aaKnown RBP16.48■□□□□ 0.23
LINC00642-202ENST00000442515 HTRA4P83105 476 aaPredicted RBP16.48■□□□□ 0.23
LINC00642-202ENST00000442515 MBTPS1Q14703 1052 aa16.48■□□□□ 0.23
LINC00642-202ENST00000442515 TTBK2Q6IQ55 1244 aa16.48■□□□□ 0.23
LINC00642-202ENST00000442515 RNF207Q6ZRF8 634 aa16.48■□□□□ 0.23
LINC00642-202ENST00000442515 IFNL3Q8IZI9 196 aa16.48■□□□□ 0.23
LINC00642-202ENST00000442515 MYOCDQ8IZQ8 938 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms