RNA–Protein interactions for RNA: ENST00000441141.5

VPS8-208, Transcript of VPS8, CORVET complex subunit, human

TSL 4

Gene VPS8, Length 549 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-208	ENST00000441141		A0A087WZG4	1122 aa		4.95	□□□□□ -1.62
VPS8-208	ENST00000441141		A0A1B0GTL3	188 aa		4.95	□□□□□ -1.62
VPS8-208	ENST00000441141	SH3D21	A4FU49	640 aa		4.95	□□□□□ -1.62
VPS8-208	ENST00000441141	IQCA1L	A6NCM1	817 aa		4.95	□□□□□ -1.62
VPS8-208	ENST00000441141	DBH	P09172	617 aa		4.95	□□□□□ -1.62
VPS8-208	ENST00000441141	GSTM1	P09488	218 aa		4.95	□□□□□ -1.62
VPS8-208	ENST00000441141	CEBPA	P49715	358 aa	Predicted RBP	4.95	□□□□□ -1.62
VPS8-208	ENST00000441141	GJA9	P57773	515 aa		4.95	□□□□□ -1.62
VPS8-208	ENST00000441141	IFRD2	Q12894	506 aa	Predicted RBP	4.95	□□□□□ -1.62
VPS8-208	ENST00000441141	TDRD10	Q5VZ19	366 aa	Known RBP	4.95	□□□□□ -1.62
VPS8-208	ENST00000441141	POMZP3	Q6PJE2	187 aa		4.95	□□□□□ -1.62
VPS8-208	ENST00000441141	C6orf15	Q6UXA7	325 aa	Predicted RBP	4.95	□□□□□ -1.62
VPS8-208	ENST00000441141	ADAT2	Q7Z6V5	191 aa	Known RBP	4.95	□□□□□ -1.62
VPS8-208	ENST00000441141	TMEM52	Q8NDY8	209 aa		4.95	□□□□□ -1.62
VPS8-208	ENST00000441141	MRFAP1L1	Q96HT8	127 aa		4.95	□□□□□ -1.62
VPS8-208	ENST00000441141	HAUS7	Q99871	368 aa		4.95	□□□□□ -1.62
VPS8-208	ENST00000441141	PDLIM7	Q9NR12	457 aa		4.95	□□□□□ -1.62
VPS8-208	ENST00000441141	SMPD4	Q9NXE4	827 aa		4.95	□□□□□ -1.62
VPS8-208	ENST00000441141	SF3B6	Q9Y3B4	125 aa	Known RBP	4.95	□□□□□ -1.62
VPS8-208	ENST00000441141	NOP56	O00567	594 aa	Known RBP	4.94	□□□□□ -1.62
VPS8-208	ENST00000441141	GJB6	O95452	261 aa		4.94	□□□□□ -1.62
VPS8-208	ENST00000441141	PLA2G1B	P04054	148 aa	Known RBP	4.94	□□□□□ -1.62
VPS8-208	ENST00000441141	NCAM1	P13591	858 aa		4.94	□□□□□ -1.62
VPS8-208	ENST00000441141	CD247	P20963	164 aa		4.94	□□□□□ -1.62
VPS8-208	ENST00000441141	FBLN1	P23142	703 aa		4.94	□□□□□ -1.62
VPS8-208	ENST00000441141	CNR2	P34972	360 aa		4.94	□□□□□ -1.62
VPS8-208	ENST00000441141	PRR5	P85299	388 aa		4.94	□□□□□ -1.62
VPS8-208	ENST00000441141	ZXDA	P98168	799 aa		4.94	□□□□□ -1.62
VPS8-208	ENST00000441141	RBM10	P98175	930 aa	Known RBP	4.94	□□□□□ -1.62
VPS8-208	ENST00000441141	RTP2	Q5QGT7	225 aa		4.94	□□□□□ -1.62
VPS8-208	ENST00000441141	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.94	□□□□□ -1.62
VPS8-208	ENST00000441141	PPFIBP1	Q86W92	1011 aa		4.94	□□□□□ -1.62
VPS8-208	ENST00000441141	ST13P5	Q8NFI4	369 aa	Predicted RBP	4.94	□□□□□ -1.62
VPS8-208	ENST00000441141	ZNF526	Q8TF50	670 aa	Predicted RBP	4.94	□□□□□ -1.62
VPS8-208	ENST00000441141	DDX1	Q92499	740 aa	Known RBP	4.94	□□□□□ -1.62
VPS8-208	ENST00000441141	ZNF669	Q96BR6	464 aa	Predicted RBP	4.94	□□□□□ -1.62
VPS8-208	ENST00000441141	SRPK1	Q96SB4	655 aa	Known RBP	4.94	□□□□□ -1.62
VPS8-208	ENST00000441141	ST7	Q9NRC1	585 aa		4.94	□□□□□ -1.62
VPS8-208	ENST00000441141	PCDHB10	Q9UN67	800 aa		4.94	□□□□□ -1.62
VPS8-208	ENST00000441141	DIS3	Q9Y2L1	958 aa	Known RBP	4.94	□□□□□ -1.62
VPS8-208	ENST00000441141	SUGT1	Q9Y2Z0	365 aa		4.94	□□□□□ -1.62
VPS8-208	ENST00000441141	FHOD1	Q9Y613	1164 aa		4.94	□□□□□ -1.62
VPS8-208	ENST00000441141		C9IYK1	514 aa		4.93	□□□□□ -1.62
VPS8-208	ENST00000441141		F8W031	263 aa	Predicted RBP	4.93	□□□□□ -1.62
VPS8-208	ENST00000441141	PDPK1	O15530	556 aa		4.93	□□□□□ -1.62
VPS8-208	ENST00000441141	AKAP8	O43823	692 aa	Known RBP	4.93	□□□□□ -1.62
VPS8-208	ENST00000441141	ATF2	P15336	505 aa		4.93	□□□□□ -1.62
VPS8-208	ENST00000441141	CORO7	P57737	925 aa		4.93	□□□□□ -1.62
VPS8-208	ENST00000441141	HTRA3	P83110	453 aa		4.93	□□□□□ -1.62
VPS8-208	ENST00000441141	SERINC3	Q13530	473 aa		4.93	□□□□□ -1.62
VPS8-208	ENST00000441141	RASGRF1	Q13972	1273 aa		4.93	□□□□□ -1.62
VPS8-208	ENST00000441141	DCAF15	Q66K64	600 aa		4.93	□□□□□ -1.62
VPS8-208	ENST00000441141	CARF	Q8N187	725 aa		4.93	□□□□□ -1.62
VPS8-208	ENST00000441141	KLHL6	Q8WZ60	621 aa		4.93	□□□□□ -1.62
VPS8-208	ENST00000441141	RCC1L	Q96I51	464 aa	Known RBP	4.93	□□□□□ -1.62
VPS8-208	ENST00000441141	DEPDC7	Q96QD5	511 aa		4.93	□□□□□ -1.62
VPS8-208	ENST00000441141	SLC12A9	Q9BXP2	914 aa		4.93	□□□□□ -1.62
VPS8-208	ENST00000441141	ZSWIM4	Q9H7M6	989 aa		4.93	□□□□□ -1.62
VPS8-208	ENST00000441141	GP6	Q9HCN6	339 aa		4.93	□□□□□ -1.62
VPS8-208	ENST00000441141	FAM86C1	Q9NVL1	165 aa		4.93	□□□□□ -1.62
VPS8-208	ENST00000441141	LRP2BP	Q9P2M1	347 aa		4.93	□□□□□ -1.62
VPS8-208	ENST00000441141	SRRD	Q9UH36	339 aa		4.93	□□□□□ -1.62
VPS8-208	ENST00000441141	MSRB2	Q9Y3D2	182 aa		4.93	□□□□□ -1.62
VPS8-208	ENST00000441141	HCFC2	Q9Y5Z7	792 aa		4.93	□□□□□ -1.62
VPS8-208	ENST00000441141	CCDC85C	A6NKD9	419 aa		4.92	□□□□□ -1.62
VPS8-208	ENST00000441141	SUV39H1	O43463	412 aa		4.92	□□□□□ -1.62
VPS8-208	ENST00000441141	SUSD5	O60279	629 aa		4.92	□□□□□ -1.62
VPS8-208	ENST00000441141	NOBOX	O60393	691 aa		4.92	□□□□□ -1.62
VPS8-208	ENST00000441141	ITGB3	P05106	788 aa		4.92	□□□□□ -1.62
VPS8-208	ENST00000441141	EPHX1	P07099	455 aa		4.92	□□□□□ -1.62
VPS8-208	ENST00000441141	TNFRSF1A	P19438	455 aa		4.92	□□□□□ -1.62
VPS8-208	ENST00000441141	NOP2	P46087	812 aa	Known RBP	4.92	□□□□□ -1.62
VPS8-208	ENST00000441141	ADAM17	P78536	824 aa		4.92	□□□□□ -1.62
VPS8-208	ENST00000441141	POU4F1	Q01851	419 aa		4.92	□□□□□ -1.62
VPS8-208	ENST00000441141	CCDC144B	Q3MJ40	725 aa		4.92	□□□□□ -1.62
VPS8-208	ENST00000441141	SV2C	Q496J9	727 aa		4.92	□□□□□ -1.62
VPS8-208	ENST00000441141	MTERF2	Q49AM1	385 aa		4.92	□□□□□ -1.62
VPS8-208	ENST00000441141	DPH6	Q7L8W6	267 aa		4.92	□□□□□ -1.62
VPS8-208	ENST00000441141	LRRC47	Q8N1G4	583 aa	Known RBP	4.92	□□□□□ -1.62
VPS8-208	ENST00000441141	CELF2-AS1	Q8N7Q2	184 aa		4.92	□□□□□ -1.62
VPS8-208	ENST00000441141	PPP1R14A	Q96A00	147 aa		4.92	□□□□□ -1.62
VPS8-208	ENST00000441141	SGSM3	Q96HU1	749 aa		4.92	□□□□□ -1.62
VPS8-208	ENST00000441141	LNPK	Q9C0E8	428 aa		4.92	□□□□□ -1.62
VPS8-208	ENST00000441141	KLHL25	Q9H0H3	589 aa		4.92	□□□□□ -1.62
VPS8-208	ENST00000441141	ZNF451	Q9Y4E5	1061 aa		4.92	□□□□□ -1.62
VPS8-208	ENST00000441141	TBC1D8	O95759	1140 aa		4.91	□□□□□ -1.62
VPS8-208	ENST00000441141	ASGR2	P07307	311 aa		4.91	□□□□□ -1.62
VPS8-208	ENST00000441141	BMS1	Q14692	1282 aa	Known RBP	4.91	□□□□□ -1.62
VPS8-208	ENST00000441141	B3GNT8	Q7Z7M8	397 aa		4.91	□□□□□ -1.62
VPS8-208	ENST00000441141	NOP9	Q86U38	636 aa	Known RBP	4.91	□□□□□ -1.62
VPS8-208	ENST00000441141	CABP7	Q86V35	215 aa		4.91	□□□□□ -1.62
VPS8-208	ENST00000441141	ALG3	Q92685	438 aa		4.91	□□□□□ -1.62
VPS8-208	ENST00000441141	NTM	Q9P121	344 aa		4.91	□□□□□ -1.62
VPS8-208	ENST00000441141	AKT3	Q9Y243	479 aa		4.91	□□□□□ -1.62
VPS8-208	ENST00000441141	DUSP10	Q9Y6W6	482 aa		4.91	□□□□□ -1.62
VPS8-208	ENST00000441141		B2RBV5	119 aa		4.9	□□□□□ -1.63
VPS8-208	ENST00000441141	FGF10	O15520	208 aa	Predicted RBP	4.9	□□□□□ -1.63
VPS8-208	ENST00000441141	CBFA2T2	O43439	604 aa		4.9	□□□□□ -1.63
VPS8-208	ENST00000441141	TACR1	P25103	407 aa		4.9	□□□□□ -1.63
VPS8-208	ENST00000441141	MC3R	P41968	323 aa		4.9	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms