RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 ABCB11O95342 1321 aa13.6□□□□□ -0.23
UBE2D4-204ENST00000440899 A6NJR5 290 aa13.59□□□□□ -0.23
UBE2D4-204ENST00000440899 TXNP10599 105 aaKnown RBP13.59□□□□□ -0.23
UBE2D4-204ENST00000440899 PBX2P40425 430 aa13.59□□□□□ -0.23
UBE2D4-204ENST00000440899 RAB30Q15771 203 aa13.59□□□□□ -0.23
UBE2D4-204ENST00000440899 CDC37Q16543 378 aaPredicted RBP13.59□□□□□ -0.23
UBE2D4-204ENST00000440899 MCF2L2Q86YR7 1114 aa13.59□□□□□ -0.23
UBE2D4-204ENST00000440899 WNT8AQ9H1J5 351 aa13.59□□□□□ -0.23
UBE2D4-204ENST00000440899 CXXC1Q9P0U4 656 aaPredicted RBP13.59□□□□□ -0.23
UBE2D4-204ENST00000440899 TNKSO95271 1327 aa13.59□□□□□ -0.23
UBE2D4-204ENST00000440899 PARP1P09874 1014 aaKnown RBP13.58□□□□□ -0.24
UBE2D4-204ENST00000440899 TTLL4Q14679 1199 aa13.58□□□□□ -0.24
UBE2D4-204ENST00000440899 NBPF20Q3BBV1 942 aa13.58□□□□□ -0.24
UBE2D4-204ENST00000440899 NFRKBQ6P4R8 1299 aa13.58□□□□□ -0.24
UBE2D4-204ENST00000440899 OTOP2Q7RTS6 562 aa13.58□□□□□ -0.24
UBE2D4-204ENST00000440899 FBXO11Q86XK2 927 aa13.58□□□□□ -0.24
UBE2D4-204ENST00000440899 NSUN6Q8TEA1 469 aaKnown RBP13.58□□□□□ -0.24
UBE2D4-204ENST00000440899 TBC1D5Q92609 795 aa13.58□□□□□ -0.24
UBE2D4-204ENST00000440899 GAS2L1Q99501 681 aaPredicted RBP13.58□□□□□ -0.24
UBE2D4-204ENST00000440899 UBAC1Q9BSL1 405 aa13.58□□□□□ -0.24
UBE2D4-204ENST00000440899 TRMT13Q9NUP7 481 aaKnown RBP13.58□□□□□ -0.24
UBE2D4-204ENST00000440899 MRPL11Q9Y3B7 192 aaKnown RBP13.58□□□□□ -0.24
UBE2D4-204ENST00000440899 SPTBN5Q9NRC6 3674 aaKnown RBP13.58□□□□□ -0.24
UBE2D4-204ENST00000440899 DHX16O60231 1041 aaKnown RBP13.57□□□□□ -0.24
UBE2D4-204ENST00000440899 PFKMP08237 780 aa13.57□□□□□ -0.24
UBE2D4-204ENST00000440899 CYP2C9P11712 490 aa13.57□□□□□ -0.24
UBE2D4-204ENST00000440899 PTPN11Q06124 597 aaPredicted RBP13.57□□□□□ -0.24
UBE2D4-204ENST00000440899 STXBP2Q15833 593 aa13.57□□□□□ -0.24
UBE2D4-204ENST00000440899 QRICH1Q2TAL8 776 aa13.57□□□□□ -0.24
UBE2D4-204ENST00000440899 FAM47CQ5HY64 1035 aa13.57□□□□□ -0.24
UBE2D4-204ENST00000440899 CCDC62Q6P9F0 684 aa13.57□□□□□ -0.24
UBE2D4-204ENST00000440899 SYTL5Q8TDW5 730 aaPredicted RBP13.57□□□□□ -0.24
UBE2D4-204ENST00000440899 COPS5Q92905 334 aa13.57□□□□□ -0.24
UBE2D4-204ENST00000440899 SCLYQ96I15 445 aa13.57□□□□□ -0.24
UBE2D4-204ENST00000440899 TAAR1Q96RJ0 339 aa13.57□□□□□ -0.24
UBE2D4-204ENST00000440899 IWS1Q96ST2 819 aa13.57□□□□□ -0.24
UBE2D4-204ENST00000440899 JMJD4Q9H9V9 463 aa13.57□□□□□ -0.24
UBE2D4-204ENST00000440899 VAT1LQ9HCJ6 419 aa13.57□□□□□ -0.24
UBE2D4-204ENST00000440899 SLC4A7Q9Y6M7 1214 aa13.57□□□□□ -0.24
UBE2D4-204ENST00000440899 TTC28Q96AY4 2481 aa13.57□□□□□ -0.24
UBE2D4-204ENST00000440899 CHD7Q9P2D1 2997 aa13.56□□□□□ -0.24
UBE2D4-204ENST00000440899 ARIH2O95376 493 aa13.56□□□□□ -0.24
UBE2D4-204ENST00000440899 IFIT1BQ5T764 474 aaKnown RBP13.56□□□□□ -0.24
UBE2D4-204ENST00000440899 VWCEQ96DN2 955 aa13.56□□□□□ -0.24
UBE2D4-204ENST00000440899 RMDN3Q96TC7 470 aa13.56□□□□□ -0.24
UBE2D4-204ENST00000440899 PRDM12Q9H4Q4 367 aa13.56□□□□□ -0.24
UBE2D4-204ENST00000440899 SLC28A3Q9HAS3 691 aa13.56□□□□□ -0.24
UBE2D4-204ENST00000440899 MYO9BQ13459 2157 aa13.55□□□□□ -0.24
UBE2D4-204ENST00000440899 ZBBXA8MT70 800 aa13.55□□□□□ -0.24
UBE2D4-204ENST00000440899 PITPNM1O00562 1244 aa13.55□□□□□ -0.24
UBE2D4-204ENST00000440899 GH1P01241 217 aa13.55□□□□□ -0.24
UBE2D4-204ENST00000440899 LY6KQ17RY6 165 aa13.55□□□□□ -0.24
UBE2D4-204ENST00000440899 SEPT14Q6ZU15 432 aa13.55□□□□□ -0.24
UBE2D4-204ENST00000440899 RETREG2Q8NC44 543 aa13.55□□□□□ -0.24
UBE2D4-204ENST00000440899 AFG1LQ8WV93 481 aa13.55□□□□□ -0.24
UBE2D4-204ENST00000440899 AMNQ9BXJ7 453 aa13.55□□□□□ -0.24
UBE2D4-204ENST00000440899 NKX2-4Q9H2Z4 354 aa13.55□□□□□ -0.24
UBE2D4-204ENST00000440899 COL20A1Q9P218 1284 aa13.55□□□□□ -0.24
UBE2D4-204ENST00000440899 KLRF2D3W0D1 207 aa13.54□□□□□ -0.24
UBE2D4-204ENST00000440899 EIF3JO75822 258 aaKnown RBP13.54□□□□□ -0.24
UBE2D4-204ENST00000440899 CFBP00751 764 aa13.54□□□□□ -0.24
UBE2D4-204ENST00000440899 ACTN1P12814 892 aa13.54□□□□□ -0.24
UBE2D4-204ENST00000440899 ATP2A2P16615 1042 aaKnown RBP13.54□□□□□ -0.24
UBE2D4-204ENST00000440899 RFC2P35250 354 aa13.54□□□□□ -0.24
UBE2D4-204ENST00000440899 ARHGAP1Q07960 439 aa13.54□□□□□ -0.24
UBE2D4-204ENST00000440899 TRDNQ13061 729 aa13.54□□□□□ -0.24
UBE2D4-204ENST00000440899 BFSP2Q13515 415 aa13.54□□□□□ -0.24
UBE2D4-204ENST00000440899 SEC23AQ15436 765 aa13.54□□□□□ -0.24
UBE2D4-204ENST00000440899 ARHGEF16Q5VV41 709 aa13.54□□□□□ -0.24
UBE2D4-204ENST00000440899 DEFB128Q7Z7B8 93 aa13.54□□□□□ -0.24
UBE2D4-204ENST00000440899 STAG2Q8N3U4 1231 aa13.54□□□□□ -0.24
UBE2D4-204ENST00000440899 RUFY2Q8WXA3 655 aa13.54□□□□□ -0.24
UBE2D4-204ENST00000440899 SYMPKQ92797 1274 aaKnown RBP13.54□□□□□ -0.24
UBE2D4-204ENST00000440899 IL25Q9H293 177 aa13.54□□□□□ -0.24
UBE2D4-204ENST00000440899 NOD1Q9Y239 953 aa13.54□□□□□ -0.24
UBE2D4-204ENST00000440899 YBX2Q9Y2T7 364 aaKnown RBP13.54□□□□□ -0.24
UBE2D4-204ENST00000440899 PCDHA11Q9Y5I1 949 aa13.54□□□□□ -0.24
UBE2D4-204ENST00000440899 LAMA4Q16363 1823 aa13.54□□□□□ -0.24
UBE2D4-204ENST00000440899 SCN10AQ9Y5Y9 1956 aa13.54□□□□□ -0.24
UBE2D4-204ENST00000440899 NR3C2P08235 984 aa13.53□□□□□ -0.24
UBE2D4-204ENST00000440899 MMP3P08254 477 aa13.53□□□□□ -0.24
UBE2D4-204ENST00000440899 EIF2AK2P19525 551 aaKnown RBP13.53□□□□□ -0.24
UBE2D4-204ENST00000440899 CASTP20810 708 aaKnown RBP13.53□□□□□ -0.24
UBE2D4-204ENST00000440899 PDE4AP27815 886 aa13.53□□□□□ -0.24
UBE2D4-204ENST00000440899 HSD17B4P51659 736 aa13.53□□□□□ -0.24
UBE2D4-204ENST00000440899 CHMP4BP1P59074 171 aa13.53□□□□□ -0.24
UBE2D4-204ENST00000440899 TRAF1Q13077 416 aa13.53□□□□□ -0.24
UBE2D4-204ENST00000440899 TTC22Q5TAA0 569 aa13.53□□□□□ -0.24
UBE2D4-204ENST00000440899 CYB5R4Q7L1T6 521 aa13.53□□□□□ -0.24
UBE2D4-204ENST00000440899 CHST3Q7LGC8 479 aa13.53□□□□□ -0.24
UBE2D4-204ENST00000440899 SAMD3Q8N6K7 520 aa13.53□□□□□ -0.24
UBE2D4-204ENST00000440899 USP38Q8NB14 1042 aa13.53□□□□□ -0.24
UBE2D4-204ENST00000440899 PPP1R13LQ8WUF5 828 aa13.53□□□□□ -0.24
UBE2D4-204ENST00000440899 MTMR8Q96EF0 704 aa13.53□□□□□ -0.24
UBE2D4-204ENST00000440899 PXMP2Q9NR77 195 aa13.53□□□□□ -0.24
UBE2D4-204ENST00000440899 MAP3K20Q9NYL2 800 aaKnown RBP13.53□□□□□ -0.24
UBE2D4-204ENST00000440899 MAD2L2Q9UI95 211 aa13.53□□□□□ -0.24
UBE2D4-204ENST00000440899 U3KPZ7 1027 aaPredicted RBP13.53□□□□□ -0.24
UBE2D4-204ENST00000440899 PALM3A6NDB9 673 aaPredicted RBP13.52□□□□□ -0.25
UBE2D4-204ENST00000440899 OPLAHO14841 1288 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms